FFCP PHASE1:Hg19::chr11:109963610..109963630,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29362 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-295bp_to_uc010rwc.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_ZC3H12C_5end | |||
|id=chr11:109963610..109963630,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.88e-14!45;CL:0002057!2.69e-14!42;CL:0002009!1.04e-13!65;CL:0002194!5.62e-13!63;CL:0000576!5.62e-13!63;CL:0000040!5.62e-13!63;CL:0000559!5.62e-13!63;CL:0000557!1.85e-10!71;CL:0000839!2.73e-09!70;CL:0000766!8.17e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.32e-18;33!CL:0002057;7.32e-18;33!CL:0000473;1.41e-14;39!CL:0000234;1.41e-14;39!CL:0000576;8.44e-11;48!CL:0000766;7.46e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.15e-18,42;CL:0002057,9.15e-18,42;CL:0000473,1.14e-17,48;CL:0000234,1.14e-17,48;CL:0002009,2.41e-15,61;CL:0002194,2.45e-14,59;CL:0000576,2.45e-14,59;CL:0000040,2.45e-14,59;CL:0000559,2.45e-14,59;CL:0000557,1.17e-12,67;CL:0000839,2.32e-11,66;CL:0000766,3.42e-11,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.97e-15!659;UBERON:0000922!2.89e-14!612;UBERON:0000062!5.79e-14!511;UBERON:0000467!6.34e-14!625;UBERON:0000480!1.19e-13!626;UBERON:0002050!2.52e-13!605;UBERON:0005423!2.52e-13!605;UBERON:0000923!5.50e-13!604;UBERON:0005291!5.50e-13!604;UBERON:0006598!5.50e-13!604;UBERON:0002532!5.50e-13!604;UBERON:0001049!2.55e-10!57;UBERON:0005068!2.55e-10!57;UBERON:0006241!2.55e-10!57;UBERON:0007135!2.55e-10!57;UBERON:0007023!1.06e-09!115;UBERON:0002616!2.98e-09!59;UBERON:0000955!2.20e-08!69;UBERON:0006238!2.20e-08!69;UBERON:0000073!3.20e-08!94;UBERON:0001016!3.20e-08!94;UBERON:0002371!3.37e-08!80;UBERON:0002346!3.51e-08!90;UBERON:0001474!5.31e-08!86;UBERON:0003075!1.02e-07!86;UBERON:0007284!1.02e-07!86;UBERON:0002780!1.46e-07!41;UBERON:0001890!1.46e-07!41;UBERON:0006240!1.46e-07!41;UBERON:0003080!1.49e-07!42;UBERON:0001017!1.65e-07!82;UBERON:0004765!3.34e-07!101;UBERON:0001434!3.34e-07!101;UBERON:0004111!4.80e-07!241;UBERON:0005743!5.17e-07!86;UBERON:0000924!5.73e-07!173;UBERON:0006601!5.73e-07!173;UBERON:0001893!6.30e-07!34;UBERON:0002020!6.50e-07!34;UBERON:0003528!6.50e-07!34;UBERON:0002791!8.94e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.07e-10,76;UBERON:0001474,5.83e-10,82;UBERON:0002405,1.16e-08,93;UBERON:0001049,1.79e-08,56;UBERON:0005068,1.79e-08,56;UBERON:0006241,1.79e-08,56;UBERON:0007135,1.79e-08,56;UBERON:0004765,1.92e-08,90;UBERON:0000922,1.36e-07,592;UBERON:0001434,3.08e-07,100;UBERON:0007023,3.37e-07,114;UBERON:0002346,3.38e-07,86;UBERON:0000073,3.69e-07,53;UBERON:0002616,3.69e-07,53;UBERON:0003075,6.30e-07,82;UBERON:0007284,6.30e-07,82;UBERON:0002193,7.77e-07,108 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0.631719873426831,0.261185628199839,0.737201809504527,0,0.655324116390517,0.263766978228454,0.37129905888014,1.65698687863958,0,0.602694528023977,0.730310090387373,0,0.369363174230364,0.408001382488506,0.940364164434263,1.71741592278634,0.136874425072884,0.87879847716362,0.305653622991805,0.328402357799783,0.708397031823113,1.57345710739562,0.383829398097213,1.08371286321253,0,0.90361775633475,0,0,0,0.587200878669695,11.0799081706375,6.41742231904453,6.2933152507597,0.671746422719773,2.59114932815184,2.57575567634187,0.290796477559129,2.64513160582167,1.69808842831471,6.27558399645349,8.63452564845834,8.6717783850629,2.8769239232215,5.89169625016932,7.09446689665756,20.3399951634605,20.6555098746824,16.251178391321,3.38836211176688,4.09359225086769,2.69668181334102,9.18251677112708,9.62787081228281,8.95071976118658,0.989553900560148,0.797854630486527,2.55734850319616,14.5104619314292,23.2627942123367,16.8162007228805,3.51748131359441,4.17186334736161,3.04064382587163,13.3187890579341,24.3063239751793,18.0383560841304,0.633765858935825,0.212604299965044,1.04829322754188,0.112328631146495,0.150176892841506,0.964353520182481,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.767175371061182,0.361439152384566,0.50133791063589,0.289693037921647,0,0,1.98523116044542,2.21729397462564,1.05401742831751,1.11332214173056,0.728590576585084,0.370784442784429,0.97364218096405,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0.79504962946682,0,1.73570250803797,0.56530794192401,0,0,0.835979866147242,1.55050055501597,1.06729878806013,0.66944122552934,2.01414658554573,0,0.488124115096339,2.20597848207521,0,1.51809538082936,2.46982309888787,3.37834441449967,0,0,1.28241220751285,1.31780417436063,0,0,0,0.886413581652058,1.19168262731897,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,1.8672662123986,1.88594940897563,1.14423332179421,0.756787138224657,1.72852777344,0.234321431833797,0.312160076830321,1.1409436430889,0.448346041655403,0.352303495931295,0.647491777472526,0.561803226808994,1.02077085627447,0.491337269247072,0.723280468230358,0,0.494533858557114,0,0.718618141816238,0.841680569770331,0.750711119231785,1.38532057742091,0,0.30648779579902,0.300476117813194,0.907457465280168,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.744467425326359,0.843881661206331,0.487185025805993,0.252433774244115,0.184099797284599,0.646584227275248,0,0.302256294682921,0,0.966304265816484,1.36373060295417,0.573609190778008,0.365921118388786,1.06023814657188,0.232387885739037,0.829288440122964,1.00928340350251,1.82488679537915,0,0,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,1.00528972411631,0.462942225792648,0.325808305310325,0,0,0.695582429850461,1.17408694235822,1.44366447761074,1.38895653772983,2.28304982681518,0,0,2.46217006087397,2.80805118167085,1.93220510975347,0,0.16798212819886,0.567100388969546,0.53735113621709,0.581267877027924,0.766765358330422,0,0,0.414656231081544,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.66004457238855,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0.65147236858747,1.06617584622764,0.791951872933429,0.904318131178758,0,0.599837947092342,0,0.502257091432126,0,0.958499421966331,0,1.42636905040718,0.144781306667579,2.05476322550383,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.91381625495949,0,0,0,0.36807447515742,0,0.542530047399471,0.831883446123229,0.178428988797162,0.157702415033935,0.585707074963566,0.601892199455438,2.27407504055985,0,0,1.29058417979192,0.781952530212746,0.587403472388222,0,0.413536052245775,1.50999940573032,1.06727557803444,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0.410635780069046,2.07701771673448,0.116210378459959,0.604297247958111,0.200506470303285,0.368323955743585,0.114814448164607,0.546273504020151,0,0.902399225814824,0.462092022626489,0,0,0.316654886678627,1.13733384070897,1.19065593693561,0.647747748306418,0,0.541892875087706,0,1.01950509218015,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,1.64865618636356,1.09883357782012,0.577566499444116,1.72279661398852,0,1.6068392984416,0.48335359146061,0.924291702687866,0.307007349452259,0.827019434907183,0.537101224341368,0.725083469571143,1.27839941124151,0.534192213880424,0,1.34533047155574,2.04180339991335,0.2023155617111,0,0,2.0911118104818,0.616067160352178,0,0,0.37064843820784,1.28812398067792,1.48863347743867,0,0.762520775695299,0.255897791311334,1.71175595213568,0.318203247925937,0,0.539617372749944,0.274537029736055,0.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| |||
|short_description=p4@ZC3H12C | |||
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Revision as of 10:13, 11 January 2014
Short description: | p4@ZC3H12C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZC3H12C_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -295bp_to_uc010rwc.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.15e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.15e-18 | 42 |
defensive cell | 1.14e-17 | 48 |
phagocyte | 1.14e-17 | 48 |
macrophage dendritic cell progenitor | 2.41e-15 | 61 |
monopoietic cell | 2.45e-14 | 59 |
monocyte | 2.45e-14 | 59 |
monoblast | 2.45e-14 | 59 |
promonocyte | 2.45e-14 | 59 |
granulocyte monocyte progenitor cell | 1.17e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.32e-11 | 66 |
myeloid leukocyte | 3.42e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.07e-10 | 76 |
bone element | 5.83e-10 | 82 |
immune system | 1.16e-08 | 93 |
neural tube | 1.79e-08 | 56 |
neural rod | 1.79e-08 | 56 |
future spinal cord | 1.79e-08 | 56 |
neural keel | 1.79e-08 | 56 |
skeletal element | 1.92e-08 | 90 |
embryo | 1.36e-07 | 592 |
skeletal system | 3.08e-07 | 100 |
adult organism | 3.37e-07 | 114 |
neurectoderm | 3.38e-07 | 86 |
regional part of nervous system | 3.69e-07 | 53 |
regional part of brain | 3.69e-07 | 53 |
neural plate | 6.30e-07 | 82 |
presumptive neural plate | 6.30e-07 | 82 |
hemolymphoid system | 7.77e-07 | 108 |