FFCP PHASE1:Hg19::chr11:122526723..122526733,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29884 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=290bp_to_ENST00000525711_5end | |||
|description=CAGE_peak_2_at_UBASH3B_5end | |||
|id=chr11:122526723..122526733,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.45e-13!76;CL:0002194!2.95e-10!63;CL:0000576!2.95e-10!63;CL:0000040!2.95e-10!63;CL:0000559!2.95e-10!63;CL:0002009!3.09e-10!65;CL:0000557!4.77e-10!71;CL:0000839!1.41e-09!70;CL:0002057!2.98e-09!42;CL:0000763!2.15e-08!112;CL:0000049!2.15e-08!112;CL:0000860!1.50e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.97e-14;19!CL:0000081;1.44e-09;11!CL:0000094;3.38e-08;8!CL:0002541;4.20e-07;3!CL:0000766;5.73e-07;69!CL:0000763;7.26e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.14e-18,72;CL:0000763,1.85e-17,108;CL:0000049,1.85e-17,108;CL:0000349,8.03e-14,19;CL:0000557,3.03e-13,67;CL:0002009,1.32e-12,61;CL:0000839,2.77e-12,66;CL:0002194,6.04e-12,59;CL:0000576,6.04e-12,59;CL:0000040,6.04e-12,59;CL:0000559,6.04e-12,59;CL:0000081,2.64e-09,11;CL:0002032,3.57e-09,161;CL:0000837,3.57e-09,161;CL:0000988,4.62e-09,177;CL:0000473,9.99e-09,48;CL:0000234,9.99e-09,48;CL:0000037,2.43e-08,168;CL:0000094,3.93e-08,8;CL:0000738,3.78e-07,136;CL:0002541,4.42e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.02e-09!14;UBERON:0000158!1.02e-09!14;UBERON:0003081!1.66e-09!216;UBERON:0002390!1.09e-07!102;UBERON:0003061!1.09e-07!102;UBERON:0002371!2.65e-07!80;UBERON:0001474!6.90e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.70e-14;10!UBERON:0000158;3.70e-14;10!UBERON:0000478;5.87e-12;24!UBERON:0000305;6.26e-09;7!UBERON:0003124;4.20e-07;3!UBERON:0000920;4.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.22e-17,14;UBERON:0000158,1.22e-17,14;UBERON:0003081,2.29e-12,203;UBERON:0000478,5.83e-12,24;UBERON:0002371,9.05e-11,76;UBERON:0001474,1.86e-10,82;UBERON:0004765,2.39e-10,90;UBERON:0003124,2.96e-10,7;UBERON:0002390,9.30e-10,98;UBERON:0003061,9.30e-10,98;UBERON:0001434,3.46e-09,100;UBERON:0000305,4.79e-09,7;UBERON:0002405,2.93e-08,93;UBERON:0002193,4.21e-08,108;UBERON:0004871,8.50e-08,8;UBERON:0000926,1.85e-07,315;UBERON:0004120,1.85e-07,315;UBERON:0006603,1.85e-07,315;UBERON:0000920,4.42e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.491467873003018,0,2.18441372130172,1.58260186937072,0.618831764800233,0.662794751455832,0,1.20538905604795,1.46062018077475,1.46379839637152,0.369363174230364,0.408001382488506,0.940364164434263,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0.0787107813136792,1.18009283054671,0.383829398097213,1.23852898652861,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,1.79132379391939,1.94336199611388,1.03030227053675,1.16318591023652,0.377875943688809,1.94067248950253,0.929716147622738,0.822335776043652,2.78735733805593,0,0.512321413058201,0.236482229888585,0,0.645484683583826,2.70852973188684,0.941211697713023,1.36453075028923,0.674170453335254,0.918251677112708,1.28371610830437,1.27867425159808,0.659702600373432,0.997318288108159,0.852449501065388,0,0.56738522469114,2.4912889959823,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,1.47311054395026,1.58231193720442,2.11255286311942,2.12604299965044,0,0.44931452458598,0.450530678524519,0.64290234678832,1.99508920618874,1.59133341759272,2.19196984517561,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.983548850569165,0.393010762749165,0.411202997999018,0.167186495390678,0.651844533267181,0.473447805734733,0,0.445641827540694,0.294605907474837,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0.657751618414705,0.276350017785848,0.579606171470105,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,1.24930726552346,0.473554504088034,0,0,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.443458794925128,0,0.130979075497713,0.364295288292542,0,1.62273696827342,1.91542711029194,2.12732736830184,0.476981248610684,0,0,0.39752481473341,1.72046919021225,1.38856200643038,3.95715559346807,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,0.735326160691737,0,0.267899184852239,0,0.563057402416611,1.53316637465883,0,0.366403487860815,2.63560834872127,3.87780264148325,0.436094052142534,0,0.379891534993739,0.397227542439656,1.43418310374407,0,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0.942974704487816,0,0.908144565869588,1.72852777344,0.234321431833797,0.624320153660641,0,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.204154171254893,0.368502951935304,1.13658359293342,0,0.989067717114227,0,0.718618141816238,1.0100166837244,0.500474079487857,0.554128230968366,0.438977620880838,0.612975591598039,0.751190294532984,0.794025282120147,0.538168907066586,0.85422955527427,0.211931901159562,0.600182192168805,0.309157587715317,0,0,0.168776332241266,0.487185025805993,0,0,0.484938170456436,0,0.403008392910561,0,0,0.818238361772504,0.860413786167011,0.243947412259191,0.397589304964456,1.16193942869518,0.518305275076852,0.756962552626885,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0.482022059766964,0.882351781859152,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0.882926198829301,0.368965315629341,0.171567810298526,0.219500570817251,0,0.100528972411631,0.277765335475589,1.3032332212413,2.07986957055916,0,0.115930404975077,0.939269553886573,0.144366447761074,0,0,0,0.858486162094873,0.492434012174795,1.40402559083543,2.0808362720422,0,0.16798212819886,0,0.985143749731331,0.581267877027924,0,2.46331618947972,2.3773077183571,0,0.288239906833923,0.25248486685276,0.698476837213859,0.763976851116555,1.17217447210047,0,0.308482478109971,0.300343057843917,0.285826432630578,0.224262168690721,0.87192013766656,0.1466765716419,0.387815147273333,0,0.845302752556,1.06375246633948,2.08014873822732,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,2.43247561282381,2.00902836572851,0,1.19812427745791,1.14861935834114,0,0.144781306667579,0.410952645100767,0.358121926479791,0.112085143993527,0,0,0.128343036279748,1.27047312111232,1.30139853857622,0.773288812777695,0.167516265334349,0,2.99602809578873,0,7.0450637284126,0.858840442033979,1.00034104211935,1.08506009479894,1.03985430765404,0.892144943985809,0.946214490203608,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.737476674166813,0.521301686808497,0.587403472388222,1.71571711905428,0.413536052245775,0.215714200818617,0.320182673410333,0.909382714338778,3.32870879020994,3.62868351995616,0,0,0.280660094433074,0.640695746278505,0,1.12597744800525,0,0.462629081407967,0,0.164254312027618,0,0.232420756919918,1.32945394550784,0.601519410909855,0.276242966807689,0.34444334449382,0,0.524497659837696,1.80479845162965,1.15523005656622,0,0,1.89992932007176,0,0.340187410553031,1.0795795805107,1.54227252690289,0.812839312631559,0,1.78413391131527,0.831076008928724,1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| |||
|short_description=p2@UBASH3B | |||
}} |
Revision as of 10:55, 11 January 2014
Short description: | p2@UBASH3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBASH3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 290bp_to_ENST00000525711_5end |
EntrezGene: | UBASH3B |
HGNC: | 29884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.14e-18 | 72 |
myeloid cell | 1.85e-17 | 108 |
common myeloid progenitor | 1.85e-17 | 108 |
extraembryonic cell | 8.03e-14 | 19 |
granulocyte monocyte progenitor cell | 3.03e-13 | 67 |
macrophage dendritic cell progenitor | 1.32e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.77e-12 | 66 |
monopoietic cell | 6.04e-12 | 59 |
monocyte | 6.04e-12 | 59 |
monoblast | 6.04e-12 | 59 |
promonocyte | 6.04e-12 | 59 |
blood cell | 2.64e-09 | 11 |
hematopoietic oligopotent progenitor cell | 3.57e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.57e-09 | 161 |
hematopoietic cell | 4.62e-09 | 177 |
defensive cell | 9.99e-09 | 48 |
phagocyte | 9.99e-09 | 48 |
hematopoietic stem cell | 2.43e-08 | 168 |
granulocyte | 3.93e-08 | 8 |
leukocyte | 3.78e-07 | 136 |
chorionic membrane mesenchymal stem cell | 4.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.22e-17 | 14 |
membranous layer | 1.22e-17 | 14 |
lateral plate mesoderm | 2.29e-12 | 203 |
extraembryonic structure | 5.83e-12 | 24 |
bone marrow | 9.05e-11 | 76 |
bone element | 1.86e-10 | 82 |
skeletal element | 2.39e-10 | 90 |
chorion | 2.96e-10 | 7 |
hematopoietic system | 9.30e-10 | 98 |
blood island | 9.30e-10 | 98 |
skeletal system | 3.46e-09 | 100 |
amnion | 4.79e-09 | 7 |
immune system | 2.93e-08 | 93 |
hemolymphoid system | 4.21e-08 | 108 |
somatic layer of lateral plate mesoderm | 8.50e-08 | 8 |
mesoderm | 1.85e-07 | 315 |
mesoderm-derived structure | 1.85e-07 | 315 |
presumptive mesoderm | 1.85e-07 | 315 |
egg chorion | 4.42e-07 | 3 |