FFCP PHASE1:Hg19::chr12:9348229..9348233,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:9348229..9348233,+ | |||
|id=chr12:9348229..9348233,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.10e-08!5;CL:0000457!4.10e-08!5;CL:0002191!4.10e-08!5;CL:0000097!4.10e-08!5;CL:0000831!4.10e-08!5;CL:0002028!4.10e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.79e-27;5!CL:0000623;3.29e-26;3!CL:0000163;4.20e-15;9!CL:0000625;1.67e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-27,5;CL:0002028,4.92e-27,5;CL:0000623,2.26e-26,3;CL:0000825,2.26e-26,3;CL:0000163,3.84e-15,9;CL:0000047,4.94e-10,8;CL:0000037,7.47e-10,168;CL:0000738,1.78e-09,136;CL:0000988,3.28e-09,177;CL:0002032,5.24e-09,161;CL:0000837,5.24e-09,161;CL:0002031,5.79e-08,120;CL:0000625,1.83e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.36e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-12!115;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0002346!1.87e-07!90;UBERON:0005743!2.32e-07!86;UBERON:0001049!2.93e-07!57;UBERON:0005068!2.93e-07!57;UBERON:0006241!2.93e-07!57;UBERON:0007135!2.93e-07!57;UBERON:0000178!3.23e-07!15;UBERON:0000179!3.23e-07!15;UBERON:0000463!3.23e-07!15;UBERON:0001017!5.87e-07!82;UBERON:0003075!5.96e-07!86;UBERON:0007284!5.96e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.36e-09;1!UBERON:0001389;1.36e-09;1!UBERON:0000026;1.36e-09;1!UBERON:0008784;1.36e-09;1!UBERON:0001785;1.36e-09;1!UBERON:0002464;1.36e-09;1!UBERON:0004904;1.36e-09;1!UBERON:0006058;1.36e-09;1!UBERON:0003663;1.36e-09;1!UBERON:0004256;1.36e-09;1!UBERON:0001021;1.36e-09;1!UBERON:0004708;1.36e-09;1!UBERON:0002101;1.36e-09;1!UBERON:0004709;1.36e-09;1!UBERON:0002529;1.36e-09;1!UBERON:0010538;1.36e-09;1!UBERON:0003661;1.36e-09;1!UBERON:0010890;1.36e-09;1!UBERON:0002471;1.36e-09;1!UBERON:0001383;1.36e-09;1!UBERON:0010758;1.36e-09;1!UBERON:0010707;1.36e-09;1!UBERON:0000978;1.36e-09;1!UBERON:0002103;1.36e-09;1!UBERON:0001665;1.36e-09;1!UBERON:0003823;1.36e-09;1!UBERON:0000154;1.36e-09;1!UBERON:0010709;1.36e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.70e-10,1;UBERON:0001785,9.70e-10,1;UBERON:0002464,9.70e-10,1;UBERON:0004904,9.70e-10,1;UBERON:0001021,9.70e-10,1;UBERON:0003902,9.70e-10,1;UBERON:0005425,9.70e-10,1;UBERON:0005418,1.25e-09,1;UBERON:0001389,1.25e-09,1;UBERON:0000026,1.25e-09,1;UBERON:0008784,1.25e-09,1;UBERON:0006058,1.25e-09,1;UBERON:0003663,1.25e-09,1;UBERON:0004256,1.25e-09,1;UBERON:0004708,1.25e-09,1;UBERON:0002101,1.25e-09,1;UBERON:0004709,1.25e-09,1;UBERON:0002529,1.25e-09,1;UBERON:0010538,1.25e-09,1;UBERON:0003661,1.25e-09,1;UBERON:0010890,1.25e-09,1;UBERON:0002471,1.25e-09,1;UBERON:0001383,1.25e-09,1;UBERON:0004357,1.25e-09,1;UBERON:0004347,1.25e-09,1;UBERON:0005420,1.25e-09,1;UBERON:0005732,1.25e-09,1;UBERON:0010758,1.25e-09,1;UBERON:0010707,1.25e-09,1;UBERON:0000978,1.25e-09,1;UBERON:0002103,1.25e-09,1;UBERON:0001665,1.25e-09,1;UBERON:0003823,1.25e-09,1;UBERON:0000154,1.25e-09,1;UBERON:0010709,1.25e-09,1;UBERON:0005733,1.25e-09,1;UBERON:0005730,1.25e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,1.10799081706375,0.200544447470142,0.217010870715852,0.447830948479849,1.94336199611388,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0,1.15921234294021,0.296573126324121,0.802622484269139,0,0.453237370790265,0,0.34362744548263,0.759059076058509,0,0,0,0.903450714466637,0.127986611154418,0,0.473554504088034,0,2.01606743224732,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696518949197069,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,3.78608266256872,0.621984346622316,1.29707958075265,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,3.01878604803324,2.18183161675572,0,1.30139853857622,2.31986643833309,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0.284567373393656,0,0,0,1.90506224451495,0,0.842391534340376,0.228234679033192,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.762569244632931,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0.953619473882272,0,0,0,0,0,0.0884575645033392,1.22206028986725,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.146178634172371,0.164230914106418,0,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,1.0629187225069,0.817826971279221,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.371807292777007,0,0.318004350653419,0.0788617450012534,0,0,0,0.192687675289379,0,0,0,0.504143392443436,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.135075169236789,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.375935671919414,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0.380095503034311,0,0.26721740526556,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0 | |||
|short_description=p@chr12:9348229..9348233,+ | |||
}} |
Revision as of 12:01, 11 January 2014
Short description: | p@chr12:9348229..9348233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:9348229..9348233, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-27 | 5 |
basophil mast progenitor cell | 4.92e-27 | 5 |
natural killer cell | 2.26e-26 | 3 |
pro-NK cell | 2.26e-26 | 3 |
endocrine cell | 3.84e-15 | 9 |
neuronal stem cell | 4.94e-10 | 8 |
hematopoietic stem cell | 7.47e-10 | 168 |
leukocyte | 1.78e-09 | 136 |
hematopoietic cell | 3.28e-09 | 177 |
hematopoietic oligopotent progenitor cell | 5.24e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.24e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 5.79e-08 | 120 |
CD8-positive, alpha-beta T cell | 1.83e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.70e-10 | 1 |
cranial nerve | 9.70e-10 | 1 |
nerve trunk | 9.70e-10 | 1 |
nerve connecting eye with brain | 9.70e-10 | 1 |
nerve | 9.70e-10 | 1 |
retinal neural layer | 9.70e-10 | 1 |
presumptive neural retina | 9.70e-10 | 1 |
hindlimb bud | 1.25e-09 | 1 |
soleus muscle | 1.25e-09 | 1 |
appendage | 1.25e-09 | 1 |
lower limb segment | 1.25e-09 | 1 |
multi-limb segment region | 1.25e-09 | 1 |
hindlimb muscle | 1.25e-09 | 1 |
hindlimb zeugopod muscle | 1.25e-09 | 1 |
paired limb/fin | 1.25e-09 | 1 |
limb | 1.25e-09 | 1 |
pelvic appendage | 1.25e-09 | 1 |
limb segment | 1.25e-09 | 1 |
paired limb/fin segment | 1.25e-09 | 1 |
limb muscle | 1.25e-09 | 1 |
pelvic complex muscle | 1.25e-09 | 1 |
zeugopod | 1.25e-09 | 1 |
muscle of leg | 1.25e-09 | 1 |
paired limb/fin bud | 1.25e-09 | 1 |
limb bud | 1.25e-09 | 1 |
pelvic appendage bud | 1.25e-09 | 1 |
limb/fin field | 1.25e-09 | 1 |
subdivision of organism along appendicular axis | 1.25e-09 | 1 |
appendage girdle complex | 1.25e-09 | 1 |
leg | 1.25e-09 | 1 |
hindlimb | 1.25e-09 | 1 |
triceps surae | 1.25e-09 | 1 |
hindlimb zeugopod | 1.25e-09 | 1 |
posterior region of body | 1.25e-09 | 1 |
pelvic complex | 1.25e-09 | 1 |
limb field | 1.25e-09 | 1 |
hindlimb/pelvic fin field | 1.25e-09 | 1 |