FFCP PHASE1:Hg19::chr13:84480737..84480755,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:84480737..84480755,+ | |||
|id=chr13:84480737..84480755,+ | |||
|ontology_enrichment_celltype=CL:0002178!2.18e-13!3;CL:0000319!2.28e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0002178;4.35e-23;3!CL:0000054;9.87e-10;2!CL:0000137;9.87e-10;2!CL:0000092;9.87e-10;2!CL:1000415;9.87e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.15e-23,3;CL:0000054,8.69e-10,2;CL:0000137,8.69e-10,2;CL:0000092,8.69e-10,2;CL:1000415,1.12e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.94e-07;10!UBERON:0004161;6.94e-07;11 | |||
|ontology_enrichment_disease=DOID:162!6.09e-11!235;DOID:0060085!7.40e-11!1;DOID:3165!7.40e-11!1;DOID:0060121!7.40e-11!1;DOID:2438!7.40e-11!1;DOID:4418!7.40e-11!1;DOID:14566!1.19e-10!239;DOID:3030!2.28e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.08e-18;1!DOID:3165;4.08e-18;1!DOID:0060121;4.08e-18;1!DOID:2438;4.08e-18;1!DOID:4418;4.08e-18;1!DOID:200;9.87e-10;2!DOID:4305;9.87e-10;2!DOID:3493;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.16e-18,1;DOID:3165,3.16e-18,1;DOID:0060121,3.16e-18,1;DOID:2438,3.16e-18,1;DOID:4418,3.16e-18,1;DOID:200,8.69e-10,2;DOID:4305,8.69e-10,2;DOID:3493,1.57e-09,2;DOID:162,1.34e-07,235;DOID:14566,2.03e-07,239;DOID:0050686,3.94e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.11e-10!8;UBERON:0001282!1.30e-10!1;UBERON:0009842!1.30e-10!1;UBERON:0003704!1.30e-10!1;UBERON:0001171!1.30e-10!1;UBERON:0001172!1.30e-10!1;UBERON:0003135!6.63e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;8.72e-18;1!UBERON:0009842;8.72e-18;1!UBERON:0003704;8.72e-18;1!UBERON:0001171;8.72e-18;1!UBERON:0001172;8.72e-18;1!UBERON:0000945;2.85e-14;5!UBERON:0010039;2.85e-14;5!UBERON:0002294;1.81e-10;7!UBERON:0001173;1.81e-10;7!UBERON:0002110;6.69e-07;3!UBERON:0001280;8.62e-07;3!UBERON:0004647;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,8.72e-18,1;UBERON:0009842,8.72e-18,1;UBERON:0003704,8.72e-18,1;UBERON:0001171,8.72e-18,1;UBERON:0001172,8.72e-18,1;UBERON:0000945,3.01e-09,8;UBERON:0010039,3.01e-09,8;UBERON:0002294,2.55e-08,9;UBERON:0001173,2.55e-08,9;UBERON:0004912,2.55e-08,9;UBERON:0002110,7.28e-07,3;UBERON:0006242,7.28e-07,3;UBERON:0001280,8.62e-07,3;UBERON:0004647,8.62e-07,3;UBERON:0005171,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5794346080192,0,0,0,0,0,0,0,4.01196183398922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50672522863403,0.69169171316418,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96143835108969,0,0,5.53095859735583,0,5.59466906829965,0,0,0,0,0,0,1.63085047288337,2.61507115780833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63852017853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35560560676583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.985123076837112,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:84480737..84480755,+ | |||
}} |
Revision as of 18:13, 11 January 2014
Short description: | p@chr13:84480737..84480755, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:84480737..84480755, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.15e-23 | 3 |
bone matrix secreting cell | 8.69e-10 | 2 |
osteocyte | 8.69e-10 | 2 |
osteoclast | 8.69e-10 | 2 |
epithelial cell of gall bladder | 1.12e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 8.72e-18 | 1 |
acinus | 8.72e-18 | 1 |
intrahepatic bile duct | 8.72e-18 | 1 |
portal lobule | 8.72e-18 | 1 |
hepatic acinus | 8.72e-18 | 1 |
stomach | 3.01e-09 | 8 |
food storage organ | 3.01e-09 | 8 |
biliary system | 2.55e-08 | 9 |
biliary tree | 2.55e-08 | 9 |
biliary bud | 2.55e-08 | 9 |
gallbladder | 7.28e-07 | 3 |
gall bladder primordium | 7.28e-07 | 3 |
liver parenchyma | 8.62e-07 | 3 |
liver lobule | 8.62e-07 | 3 |
hepatic duct | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.16e-18 | 1 |
skin benign neoplasm | 3.16e-18 | 1 |
integumentary system benign neoplasm | 3.16e-18 | 1 |
dermis tumor | 3.16e-18 | 1 |
cutaneous fibrous histiocytoma | 3.16e-18 | 1 |
giant cell tumor | 8.69e-10 | 2 |
bone giant cell tumor | 8.69e-10 | 2 |
signet ring cell adenocarcinoma | 1.57e-09 | 2 |
cancer | 1.34e-07 | 235 |
disease of cellular proliferation | 2.03e-07 | 239 |
organ system cancer | 3.94e-07 | 137 |