FFCP PHASE1:Hg19::chr14:22958384..22958400,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-73bp_to_uc001wel.2_5end | |||
|coexpression_cluster_id=C2287 | |||
|description=CAGE_peak_2_at_uc001wel.2_5end | |||
|id=chr14:22958384..22958400,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.67e-42!53;CL:0000051!4.67e-42!53;CL:0000838!4.40e-40!52;CL:0000791!4.38e-24!18;CL:0000789!4.38e-24!18;CL:0002420!4.38e-24!18;CL:0002419!4.38e-24!18;CL:0000790!4.38e-24!18;CL:0002087!3.03e-20!119;CL:0000084!4.86e-19!25;CL:0000827!4.86e-19!25;CL:0000738!3.15e-18!140;CL:0000945!1.03e-15!24;CL:0000826!1.03e-15!24;CL:0000625!2.00e-15!11;CL:0002031!3.93e-14!124;CL:0000037!4.30e-13!172;CL:0000566!4.30e-13!172;CL:0000988!7.17e-12!182;CL:0002032!3.41e-11!165;CL:0000837!3.41e-11!165;CL:0000623!8.24e-10!3;CL:0000825!8.24e-10!3;CL:0000842!7.35e-09!3;CL:0000624!9.68e-08!6;CL:0000236!2.88e-07!14;CL:0000224!9.72e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.13e-25;24!CL:0002127;3.28e-14;1!CL:0000911;3.28e-14;1!CL:0000814;3.28e-14;1!CL:0000946;4.25e-14;1!CL:0000786;4.25e-14;1!CL:0000542;1.41e-13;53!CL:0000791;2.51e-11;18!CL:0000789;2.51e-11;18!CL:0002419;2.51e-11;18!CL:0000084;3.23e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.35e-33,52;CL:0000542,3.68e-32,53;CL:0000051,3.68e-32,53;CL:0000945,6.43e-25,24;CL:0000826,6.43e-25,24;CL:0002127,3.50e-14,1;CL:0000914,3.50e-14,1;CL:0000911,3.50e-14,1;CL:0000814,3.50e-14,1;CL:0002042,3.50e-14,1;CL:0002039,3.50e-14,1;CL:0002040,3.50e-14,1;CL:0002041,3.50e-14,1;CL:0000946,4.53e-14,1;CL:0000786,4.53e-14,1;CL:0000980,4.53e-14,1;CL:0002087,6.39e-14,115;CL:0002031,2.77e-13,120;CL:0000738,1.49e-11,136;CL:0000791,2.80e-11,18;CL:0000789,2.80e-11,18;CL:0002420,2.80e-11,18;CL:0002419,2.80e-11,18;CL:0000790,2.80e-11,18;CL:0002032,1.57e-09,161;CL:0000837,1.57e-09,161;CL:0000037,4.55e-09,168;CL:0000988,1.57e-08,177;CL:0000084,3.49e-08,25;CL:0000827,3.49e-08,25;CL:0000893,9.87e-08,2;CL:0002489,9.87e-08,2;CL:0000809,9.87e-08,2;CL:0000808,9.87e-08,2;CL:0000894,9.87e-08,2;CL:0000806,9.87e-08,2;CL:0000807,9.87e-08,2;CL:0000805,9.87e-08,2;CL:0002425,9.87e-08,2;CL:0000785,1.12e-07,2;CL:0000955,1.12e-07,2;CL:0000818,1.12e-07,2;CL:0000954,1.12e-07,2;CL:0000816,1.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.49e-14;1!CL:0000051;1.41e-13;53!CL:0000790;2.51e-11;18!CL:0002425;9.55e-08;2!CL:0000954;1.09e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.18e-13;1!DOID:0050177;1.18e-13;1!DOID:0050427;1.18e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.58e-14,1;DOID:0050177,8.58e-14,1;DOID:0050427,8.58e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.48e-10!7;UBERON:0002370!1.40e-07!4;UBERON:0005058!1.40e-07!4;UBERON:0009113!1.40e-07!4;UBERON:0003295!1.40e-07!4;UBERON:0005562!1.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;5.49e-14;1!UBERON:0002081;1.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,5.15e-14,1;UBERON:0002081,1.20e-07,2;UBERON:0010227,1.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.80621296789881,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55803701545422,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,1.17903228824749,0.205601498999509,0.501559486172034,0.651844533267181,0.946895611469467,1.94826728407911,0.111410456885174,0,0.443067789167242,0.541607727530031,0.512365278902701,0.130059347559878,0.164437904603676,0.552700035571697,0,0.296573126324121,1.07016331235885,0,0,0,0,0.253019692019503,0.95569624297229,1.30216690771284,0,0.451725357233318,0.383959833463255,1.24930726552346,0.236777252044017,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59549090373462,0.985153801009636,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0.534120355637366,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,4.64475897881586,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,2.19226677085613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,3.45701962667338,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0.790068058663633,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904244737704086,0.806971285846153,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p2@uc001wel.2 | |||
}} |
Revision as of 19:07, 11 January 2014
Short description: | p2@uc001wel.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001wel.2_5end |
Coexpression cluster: | C2287_NK_CD4_CD8_plasma_anaplastic_B_lymphoma |
Association with transcript: | -73bp_to_uc001wel.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 5.15e-14 | 1 |
cardiac atrium | 1.20e-07 | 2 |
future cardiac atrium | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.58e-14 | 1 |
monogenic disease | 8.58e-14 | 1 |
xeroderma pigmentosum | 8.58e-14 | 1 |