FFCP PHASE1:Hg19::chr14:71108367..71108385,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20267 | |||
|TSSclassifier=weak | |||
|UniProt=Q92623 | |||
|association_with_transcript=-118bp_to_ENST00000256367,NM_015351,uc001xmi.2_5end | |||
|description=CAGE_peak_4_at_TTC9_5end | |||
|id=chr14:71108367..71108385,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.87e-16!53;CL:0000051!1.87e-16!53;CL:0000838!2.70e-16!52;CL:0000945!4.48e-14!24;CL:0000826!4.48e-14!24;CL:0000236!1.34e-08!14;CL:0000047!1.57e-07!8;CL:0000791!5.31e-07!18;CL:0000789!5.31e-07!18;CL:0002420!5.31e-07!18;CL:0002419!5.31e-07!18;CL:0000790!5.31e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.70e-23;24!CL:0000236;1.02e-18;13!CL:1000507;3.69e-11;10!CL:1000494;3.69e-11;10!CL:0000540;3.36e-10;6!CL:0000404;3.36e-10;6!CL:0000542;4.52e-09;53!CL:0000239;1.09e-07;3!CL:1000615;1.09e-07;3!CL:0002306;1.09e-07;3!CL:1000449;4.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.52e-23,24;CL:0000826,3.52e-23,24;CL:0000236,1.82e-17,14;CL:0000838,9.41e-14,52;CL:0000542,2.16e-13,53;CL:0000051,2.16e-13,53;CL:1000507,5.24e-11,10;CL:1000494,5.24e-11,10;CL:0000047,8.05e-11,8;CL:0000540,2.70e-10,6;CL:0000031,2.70e-10,6;CL:0000404,2.70e-10,6;CL:0000239,2.68e-07,3;CL:1000615,2.68e-07,3;CL:0002306,2.68e-07,3;CL:1000449,5.82e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;3.36e-10;6!CL:0000051;4.52e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.55e-12!86;UBERON:0001017!1.26e-10!82;UBERON:0000073!2.51e-10!94;UBERON:0001016!2.51e-10!94;UBERON:0001869!3.80e-10!32;UBERON:0002619!3.90e-10!22;UBERON:0001893!4.78e-09!34;UBERON:0001950!6.92e-09!20;UBERON:0000956!7.65e-09!25;UBERON:0000203!7.65e-09!25;UBERON:0002020!9.01e-09!34;UBERON:0003528!9.01e-09!34;UBERON:0002791!1.22e-08!33;UBERON:0001049!3.62e-08!57;UBERON:0005068!3.62e-08!57;UBERON:0006241!3.62e-08!57;UBERON:0007135!3.62e-08!57;UBERON:0007023!4.03e-08!115;UBERON:0002780!2.18e-07!41;UBERON:0001890!2.18e-07!41;UBERON:0006240!2.18e-07!41;UBERON:0003080!5.15e-07!42;UBERON:0003075!7.18e-07!86;UBERON:0007284!7.18e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.69e-11;10!UBERON:0009773;3.69e-11;10!UBERON:0001231;3.69e-11;10!UBERON:0004810;3.69e-11;10!UBERON:0002114;1.72e-08;2!UBERON:0006853;1.09e-07;3!UBERON:0007685;1.09e-07;3!UBERON:0004134;1.09e-07;3!UBERON:0006555;4.67e-07;15!UBERON:0004819;4.67e-07;15!UBERON:0001285;4.67e-07;15!UBERON:0007684;4.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.24e-11,10;UBERON:0002114,1.17e-08,2;UBERON:0006853,2.68e-07,3;UBERON:0007685,2.68e-07,3;UBERON:0004134,2.68e-07,3;UBERON:0004211,5.82e-07,15;UBERON:0009773,5.82e-07,15;UBERON:0001231,5.82e-07,15;UBERON:0001285,5.82e-07,15;UBERON:0007684,5.82e-07,15;UBERON:0004208,5.82e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,1.29902789771517,1.14940825229924,0.472264687882075,0,0,0.154816123316076,0,0,0.369754010166788,2.01414721508784,1.56386155736164,0.293600439334847,0,0.200544447470142,0,0,0,0.515151135268373,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,4.36910889009705,2.66852776159066,2.98711155796555,4.40435585739614,5.17277195959035,3.30522436392431,4.77026877267682,4.55370375287559,0,3.05818582500183,0,0,0,0.983548850569165,0.786021525498329,0.616804496998528,0.668745981562712,0.651844533267181,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0,0.384273959177026,0.390178042679635,1.15106533222573,0.829050053357545,1.73881851441031,2.07601188426885,2.1403266247177,2.09071047609954,1.58633079776593,0.766440987203842,1.03088233644789,1.26509846009751,1.59282707162048,0.651083453856419,0,0.903450714466637,1.27986611154418,1.24930726552346,0.947109008176067,0,0.201606743224732,0.267440195783507,1.59306844271079,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.458426764241994,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.487894824518382,0.795178609928912,0.580969714347592,0.829288440122964,0.756962552626885,2.18986415445498,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.614942192715568,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.513372145118994,0.76228387266739,2.60279707715243,0.773288812777695,3.85287410269002,2.55175500661265,4.49404214368309,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,1.28913384510255,0,0,0,3.15839729035188,2.46449078734127,0,1.46139224653261,2.84989398010764,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,2.49322802678617,1.11937377361089,0,0,0.769350375349168,0.656029291399411,0.650756789328606,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.979352392114111,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,1.01489521846434,0.764637207142375,1.13929437434833,1.42939065274673,0,0,0.540031437238115,0,0,0,0.980160863924127,0.185803175125719,0.144269212976445,0.213425530045242,0.478278818186467,0.399158742865633,0.383010740264733,1.48171507906718,0,0,0,0,0,1.01575066680962,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0,0.36408156524854,0,0,0.23874448473769,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,1.10513566212459,0,0,1.10776324914963,0,0.629078458031288,2.14825409610731,0,0.0986434056369336,0,0,0,0.185536196323703,7.98455192004777,0.260427761085233,2.79871999987826,0,0.227586896570999,1.5255219017566,0,0,0,0.694499979733169,0,2.41192877250816,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0.697118721393016,0.0769502585037971,0,0.46112780877612,0.359030577639089,0.434589487688032,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,13.1611287501111,0.252746318513952,0.300646838828985,0.207376382794494,0,0,0,0,1.42304773014896,0,0.867798691675654,0.391969589657511,0,0.34945333648406,0,0,0.0730893170861856,0,0.678923115418936,0,0.677942222341597,0,0,0.379864775735272,0.586654148204409,1.60317640503067,0,0,0,0.229073192331831,0,0.14405479798815,0,0.942776138467182,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0.196854963029498,0.338693328263138,1.59045937961861,0.817220436669454,1.28602518772015,1.37539436597234,2.9080823662043,0,0,0.789744236554321,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.320362237703084,0,0.414239055347196,0,0,0.730755590285376,0,0,0,0,0,1.41348686625211,0.886068179966986,0.488105059607853,0.625954653532499,1.14681839138014,0.110929051536852,0.496771223531068,0.691743174681154,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0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| |||
|short_description=p4@TTC9 | |||
}} |
Revision as of 20:51, 11 January 2014
Short description: | p4@TTC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TTC9_5end |
Coexpression cluster: | NA |
Association with transcript: | -118bp_to_ENST00000256367, NM_015351, uc001xmi.2_5end |
EntrezGene: | TTC9 |
HGNC: | 20267 |
UniProt: | Q92623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.52e-23 | 24 |
pro-B cell | 3.52e-23 | 24 |
B cell | 1.82e-17 | 14 |
lymphoid lineage restricted progenitor cell | 9.41e-14 | 52 |
lymphocyte | 2.16e-13 | 53 |
common lymphoid progenitor | 2.16e-13 | 53 |
kidney tubule cell | 5.24e-11 | 10 |
nephron tubule epithelial cell | 5.24e-11 | 10 |
neuronal stem cell | 8.05e-11 | 8 |
neuron | 2.70e-10 | 6 |
neuroblast | 2.70e-10 | 6 |
electrically signaling cell | 2.70e-10 | 6 |
brush border epithelial cell | 2.68e-07 | 3 |
kidney cortex tubule cell | 2.68e-07 | 3 |
epithelial cell of proximal tubule | 2.68e-07 | 3 |
epithelial cell of nephron | 5.82e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.24e-11 | 10 |
duodenum | 1.17e-08 | 2 |
renal cortex tubule | 2.68e-07 | 3 |
region of nephron tubule | 2.68e-07 | 3 |
proximal tubule | 2.68e-07 | 3 |
nephron epithelium | 5.82e-07 | 15 |
renal tubule | 5.82e-07 | 15 |
nephron tubule | 5.82e-07 | 15 |
nephron | 5.82e-07 | 15 |
uriniferous tubule | 5.82e-07 | 15 |
nephrogenic mesenchyme | 5.82e-07 | 15 |