FFCP PHASE1:Hg19::chr15:34338836..34338844,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=1133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1954 | |||
|TSSclassifier=weak | |||
|UniProt=Q6NUM3 | |||
|association_with_transcript=0bp_to_BC068528_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_4_at_CHRM5_5end | |||
|id=chr15:34338836..34338844,+ | |||
|ontology_enrichment_celltype=CL:0002541!9.56e-27!3;CL:0000135!4.22e-12!3;CL:0000386!4.22e-12!3;CL:0000388!4.22e-12!3;CL:0000594!6.96e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.89e-75;3!CL:0000349;2.45e-21;19!CL:0000039;3.41e-15;7!CL:0000586;3.41e-15;7!CL:0002178;1.74e-09;3!CL:0000723;6.98e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.81e-75,3;CL:0000349,2.45e-21,19;CL:0000039,3.29e-15,7;CL:0000586,3.29e-15,7;CL:0002178,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.62e-26;1 | |||
|ontology_enrichment_disease=DOID:1799!8.17e-10!1;DOID:10165!8.17e-10!1;DOID:1798!8.17e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!9.56e-27!3;UBERON:0000920!9.56e-27!3;UBERON:0003124!4.38e-20!7;UBERON:0005631!2.43e-15!14;UBERON:0000158!2.43e-15!14;UBERON:0000043!4.22e-12!3;UBERON:0002022!2.67e-09!1;UBERON:0000478!7.11e-09!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.89e-75;3!UBERON:0000920;6.89e-75;3!UBERON:0005631;5.81e-40;10!UBERON:0000158;5.81e-40;10!UBERON:0000478;5.21e-26;24!UBERON:0001987;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.81e-75,3;UBERON:0003124,7.94e-57,7;UBERON:0005631,3.06e-44,14;UBERON:0000158,3.06e-44,14;UBERON:0000478,5.21e-26,24;UBERON:0004923,1.20e-09,66;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.429680979473094,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7640976097015,3.59030577639089,0,5.74202087517455,4.94627004370057,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59847687665704,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21755925406597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CHRM5 | |||
}} |
Revision as of 22:43, 11 January 2014
Short description: | p4@CHRM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CHRM5_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_BC068528_5end |
EntrezGene: | CHRM5 |
HGNC: | 1954 |
UniProt: | Q6NUM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.81e-75 | 3 |
extraembryonic cell | 2.45e-21 | 19 |
germ line cell | 3.29e-15 | 7 |
germ cell | 3.29e-15 | 7 |
epithelial cell of stomach | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.81e-75 | 3 |
chorion | 7.94e-57 | 7 |
extraembryonic membrane | 3.06e-44 | 14 |
membranous layer | 3.06e-44 | 14 |
extraembryonic structure | 5.21e-26 | 24 |
organ component layer | 1.20e-09 | 66 |
placenta | 1.80e-07 | 4 |
allantois | 1.80e-07 | 4 |