FFCP PHASE1:Hg19::chr15:90346918..90346991,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90346918..90346991,- | |||
|id=chr15:90346918..90346991,- | |||
|ontology_enrichment_celltype=CL:0000048!5.45e-26!430;CL:0000723!1.84e-24!436;CL:0000034!1.64e-22!444;CL:0002320!1.21e-18!365;CL:0002371!4.83e-17!591;CL:0000134!1.43e-16!358;CL:0000055!8.17e-16!180;CL:0000057!2.38e-15!75;CL:0000144!1.64e-12!625;CL:0000219!4.33e-12!390;CL:0002057!1.18e-10!42;CL:0000680!1.54e-10!57;CL:0000056!1.54e-10!57;CL:0000355!1.54e-10!57;CL:0000766!2.39e-10!76;CL:0000183!5.58e-10!59;CL:0002620!1.66e-09!23;CL:0002194!3.08e-09!63;CL:0000576!3.08e-09!63;CL:0000040!3.08e-09!63;CL:0000559!3.08e-09!63;CL:0000187!3.54e-09!54;CL:0000860!4.46e-09!45;CL:0002009!1.72e-08!65;CL:0000557!3.22e-08!71;CL:0000839!6.34e-08!70;CL:0000548!4.07e-07!679;CL:0000004!4.07e-07!679;CL:0000255!4.07e-07!679;CL:0000393!6.36e-07!60;CL:0000211!6.36e-07!60;CL:0000012!9.77e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-17;33!CL:0002057;3.36e-17;33!CL:0000473;4.63e-15;39!CL:0000234;4.63e-15;39!CL:0000680;1.16e-07;7!CL:0000576;2.53e-07;48!CL:0002559;2.78e-07;5!CL:0002620;2.83e-07;23!CL:0000188;8.16e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.48e-20,427;CL:0000723,9.47e-20,433;CL:0000034,1.04e-18,441;CL:0002320,2.21e-14,361;CL:0000473,1.45e-13,48;CL:0000234,1.45e-13,48;CL:0000134,4.49e-13,354;CL:0000860,6.57e-13,42;CL:0002057,6.57e-13,42;CL:0002194,3.86e-10,59;CL:0000576,3.86e-10,59;CL:0000040,3.86e-10,59;CL:0000559,3.86e-10,59;CL:0000766,6.47e-10,72;CL:0000219,6.71e-10,386;CL:0000057,8.04e-10,76;CL:0002009,1.53e-09,61;CL:0000557,1.20e-08,67;CL:0000680,2.07e-08,58;CL:0000056,2.07e-08,58;CL:0000355,2.07e-08,58;CL:0000839,3.18e-08,66;CL:0002559,3.57e-07,5;CL:0002620,3.98e-07,23;CL:0000187,9.64e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.80e-19!167;UBERON:0002384!4.16e-18!375;UBERON:0004290!5.30e-14!70;UBERON:0000926!4.65e-13!448;UBERON:0004120!4.65e-13!448;UBERON:0006603!4.65e-13!448;UBERON:0000914!5.00e-13!83;UBERON:0002329!5.00e-13!83;UBERON:0003077!5.00e-13!83;UBERON:0003059!5.00e-13!83;UBERON:0007282!5.00e-13!83;UBERON:0009618!5.00e-13!83;UBERON:0007285!5.00e-13!83;UBERON:0005256!1.82e-11!143;UBERON:0000486!8.91e-11!82;UBERON:0002385!2.39e-10!63;UBERON:0001015!2.39e-10!63;UBERON:0000383!2.39e-10!63;UBERON:0001134!3.27e-10!61;UBERON:0002036!3.27e-10!61;UBERON:0003082!3.27e-10!61;UBERON:0003081!1.30e-09!216;UBERON:0002405!1.38e-09!115;UBERON:0002199!2.07e-09!45;UBERON:0002416!2.07e-09!45;UBERON:0002371!4.30e-09!80;UBERON:0001474!1.74e-08!86;UBERON:0004765!4.06e-08!101;UBERON:0001434!4.06e-08!101;UBERON:0000479!4.64e-08!787;UBERON:0002097!6.75e-08!40;UBERON:0002390!2.07e-07!102;UBERON:0003061!2.07e-07!102;UBERON:0002100!6.45e-07!216;UBERON:0002193!6.59e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.36e-08;16!UBERON:0002036;7.36e-08;16!UBERON:0002385;1.70e-07;31!UBERON:0001015;1.70e-07;31!UBERON:0000383;1.70e-07;31!UBERON:0002073;2.78e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.91e-18,167;UBERON:0002384,1.18e-13,371;UBERON:0007524,7.83e-12,73;UBERON:0002329,1.49e-11,71;UBERON:0003059,1.49e-11,71;UBERON:0007282,1.49e-11,71;UBERON:0004290,1.49e-11,71;UBERON:0009618,1.49e-11,71;UBERON:0003077,2.98e-11,72;UBERON:0007285,2.98e-11,72;UBERON:0007503,4.68e-11,78;UBERON:0000926,2.74e-10,315;UBERON:0004120,2.74e-10,315;UBERON:0006603,2.74e-10,315;UBERON:0002371,1.52e-09,76;UBERON:0001474,1.54e-09,82;UBERON:0002199,2.34e-09,46;UBERON:0002416,2.34e-09,46;UBERON:0004765,2.61e-09,90;UBERON:0000486,3.26e-09,83;UBERON:0005256,7.31e-09,122;UBERON:0001434,1.45e-08,100;UBERON:0002385,1.73e-08,64;UBERON:0001015,1.73e-08,64;UBERON:0000383,1.73e-08,64;UBERON:0001134,4.79e-08,62;UBERON:0002036,4.79e-08,62;UBERON:0003082,4.79e-08,62;UBERON:0002405,1.66e-07,93;UBERON:0002073,3.57e-07,5;UBERON:0005086,3.57e-07,5;UBERON:0002097,5.50e-07,41;UBERON:0000479,8.46e-07,773 | |||
|phase1_expression=1.63510541343501,1.49870366723688,0.563817616383885,0,0,0,0,3.15859936713415,1.56711376919903,0.245733936501509,0,0.218441372130172,0.263766978228454,1.60896258848061,0.331397375727916,0,1.80808358407193,1.46062018077475,0.975865597581014,0.738726348460727,1.02000345622126,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0,0,0.802177789880567,0.434021741431704,0.223915474239924,0,0.257575567634187,3.78035420826868,1.51150377475524,1.21292030593908,4.18372266430232,3.70051099219643,1.85823822537062,6.32923263108731,3.07392847834921,1.6553756092201,3.44745680736619,1.29096936716765,4.06279459783025,5.45902784673554,3.547779950752,1.12361742222542,4.89734227793444,2.24650318953266,0,2.96866170168044,5.58498241340569,1.27867425159808,3.77272010217159,0,2.4912889959823,3.26623264833766,2.60741459210101,0.868755378820466,3.02699751316684,0.368277635987565,0.949387162322653,0.422510572623884,0,0,0.336985893439485,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.869079113764942,0.795285947051099,1.94653948121054,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0.324547393654683,0.870648686496336,3.19099105245276,0,0,0,0,0.860234595106124,0,1.13061588384802,0.419499436209906,0,1.04497483268405,0,0,0.66944122552934,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.625098097988558,0,0.112611480483322,0,0,1.83201743930407,1.31780417436063,0,0,0.993943903390637,0.12663051166458,0.264818361626438,3.44203944898576,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.490385709340376,1.66493170409425,2.30470369792,0.468642863667593,3.43376084513353,1.1409436430889,3.58676833324323,0.939475989150119,0.971237666208789,1.40450806702248,1.02077085627447,0.61417158655884,1.96318984233954,0,0.989067717114227,2.73048408581408,3.59309070908119,0.336672227908132,0.375355559615893,0.831192346452549,0,1.22595118319608,0,0.567160915800105,3.04962380671065,1.49490172172997,0.423863802319124,4.80145753735044,1.64884046781502,3.60696756063881,2.60563598864226,1.5189869901714,1.16924406193438,1.00973509697646,0.920498986422993,0.484938170456436,3.55009592516614,0.806016785821122,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,3.12899064659632,5.78916844373597,1.38134921352481,4.17931135228781,4.33127689001751,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,6.33775174109154,2.94848165003288,1.77236972004421,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,0.468008530278475,1.33768046059855,0,0,0,0.268675568108545,0,0,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.897048674762886,0.43596006883328,0.80672114403045,0.129271715757778,7.15312891703765,4.22651376278,0,0,0.514414748524284,1.41849132023278,2.66422179016099,0.142977993658148,1.62786481617433,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0,0,2.00902836572851,2.10833939483032,0,0,1.42636905040718,2.17171960001369,4.10952645100767,1.43248770591916,0,0,0.215627574859517,0,0,0,0,0,0,1.49801404789436,14.9580729602012,2.48649308061621,0.736148950314839,5.50187573165645,0.813795071099207,0.415941723061614,1.78428988797162,0.630809660135739,0.585707074963566,0.601892199455438,0,2.0694614258501,0,0.184369168541703,4.25729710893606,1.56640925970192,1.02943027143257,0.206768026122887,0.215714200818617,0.213455115606889,0,1.66435439510497,0.30239029332968,0.744323423456331,0.61384789315225,1.68396056659844,0.256278298511402,1.02341449813341,0.160853921143607,1.48418066444991,3.54682295746108,4.6166048581413,1.97105174433142,3.63478100428535,4.88083589531829,0,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0.850468526382578,0.431831832204279,1.54227252690289,0,1.00337954770971,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,1.72279661398852,0.650060246036521,3.21367859688319,2.03008508413456,1.3864375540318,1.07452572308291,1.51620229732984,1.28904293841928,2.0302337147992,1.44885266607372,0.356128142586949,0,0,0,0,0,5.98143458978216,0,1.23213432070436,0.532306030317022,0.869932992075073,2.59453906745488,0,1.48863347743867,0.949138274156178,0.571890581771475,0,2.1396949401696,1.59101623962968,1.56989728039846,0.359744915166629,3.0199073270966,0.235624804691373,0,1.58510321173008,1.68503382495592,0,2.92456187557541,1.05650146756755,0.545999645631943,1.41405431953713,0,1.10273068709225,1.32687795048244,0.876901770507525,0,0.655894752046633,0.608731130888112,0.6196469961995,0,0.286822704408103,0.196498082026242,0.35667105148125,1.41904425628239,0.422215270595328,1.97576935775941,0.75894634753143,2.0996083214699,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0.1995793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| |||
|short_description=p@chr15:90346918..90346991,- | |||
}} |
Revision as of 01:10, 12 January 2014
Short description: | p@chr15:90346918..90346991, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90346918..90346991, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.48e-20 | 427 |
somatic stem cell | 9.47e-20 | 433 |
stem cell | 1.04e-18 | 441 |
connective tissue cell | 2.21e-14 | 361 |
defensive cell | 1.45e-13 | 48 |
phagocyte | 1.45e-13 | 48 |
mesenchymal cell | 4.49e-13 | 354 |
classical monocyte | 6.57e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.57e-13 | 42 |
monopoietic cell | 3.86e-10 | 59 |
monocyte | 3.86e-10 | 59 |
monoblast | 3.86e-10 | 59 |
promonocyte | 3.86e-10 | 59 |
myeloid leukocyte | 6.47e-10 | 72 |
motile cell | 6.71e-10 | 386 |
fibroblast | 8.04e-10 | 76 |
macrophage dendritic cell progenitor | 1.53e-09 | 61 |
granulocyte monocyte progenitor cell | 1.20e-08 | 67 |
muscle precursor cell | 2.07e-08 | 58 |
myoblast | 2.07e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-08 | 58 |
myeloid lineage restricted progenitor cell | 3.18e-08 | 66 |
hair follicle cell | 3.57e-07 | 5 |
skin fibroblast | 3.98e-07 | 23 |
muscle cell | 9.64e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.91e-18 | 167 |
connective tissue | 1.18e-13 | 371 |
dense mesenchyme tissue | 7.83e-12 | 73 |
somite | 1.49e-11 | 71 |
presomitic mesoderm | 1.49e-11 | 71 |
presumptive segmental plate | 1.49e-11 | 71 |
dermomyotome | 1.49e-11 | 71 |
trunk paraxial mesoderm | 1.49e-11 | 71 |
paraxial mesoderm | 2.98e-11 | 72 |
presumptive paraxial mesoderm | 2.98e-11 | 72 |
epithelial vesicle | 4.68e-11 | 78 |
mesoderm | 2.74e-10 | 315 |
mesoderm-derived structure | 2.74e-10 | 315 |
presumptive mesoderm | 2.74e-10 | 315 |
bone marrow | 1.52e-09 | 76 |
bone element | 1.54e-09 | 82 |
integument | 2.34e-09 | 46 |
integumental system | 2.34e-09 | 46 |
skeletal element | 2.61e-09 | 90 |
multilaminar epithelium | 3.26e-09 | 83 |
trunk mesenchyme | 7.31e-09 | 122 |
skeletal system | 1.45e-08 | 100 |
muscle tissue | 1.73e-08 | 64 |
musculature | 1.73e-08 | 64 |
musculature of body | 1.73e-08 | 64 |
skeletal muscle tissue | 4.79e-08 | 62 |
striated muscle tissue | 4.79e-08 | 62 |
myotome | 4.79e-08 | 62 |
immune system | 1.66e-07 | 93 |
hair follicle | 3.57e-07 | 5 |
hair follicle placode | 3.57e-07 | 5 |
skin of body | 5.50e-07 | 41 |
tissue | 8.46e-07 | 773 |