FFCP PHASE1:Hg19::chr16:86542455..86542500,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000501311,NR_033925,NR_036444,uc002fjk.1_5end | |||
|coexpression_cluster_id=C1770 | |||
|description=CAGE_peak_1_at_LOC400550_5end | |||
|id=chr16:86542455..86542500,- | |||
|ontology_enrichment_celltype=CL:0000192!3.55e-15!42;CL:0000514!3.55e-15!42;CL:0000183!4.00e-11!59;CL:0000187!5.96e-10!54;CL:0000055!4.13e-09!180;CL:0000359!7.14e-09!32;CL:0000680!8.75e-09!57;CL:0000056!8.75e-09!57;CL:0000355!8.75e-09!57;CL:0000393!9.22e-08!60;CL:0000211!9.22e-08!60;CL:0000057!5.32e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.38e-11;43!CL:0000359;3.57e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.05e-15,43;CL:0000514,6.05e-15,43;CL:0000187,1.50e-09,55;CL:0000680,1.37e-08,58;CL:0000056,1.37e-08,58;CL:0000355,1.37e-08,58;CL:0000393,9.71e-08,61;CL:0000211,9.71e-08,61;CL:0000359,3.17e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.38e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.42e-24!347;UBERON:0000477!1.85e-21!286;UBERON:0007023!2.82e-20!115;UBERON:0000475!2.48e-19!365;UBERON:0001049!1.04e-13!57;UBERON:0005068!1.04e-13!57;UBERON:0006241!1.04e-13!57;UBERON:0007135!1.04e-13!57;UBERON:0004111!1.73e-13!241;UBERON:0000153!3.48e-13!129;UBERON:0007811!3.48e-13!129;UBERON:0000062!8.62e-13!511;UBERON:0000033!9.82e-13!123;UBERON:0002616!1.04e-11!59;UBERON:0000064!2.58e-11!219;UBERON:0003075!3.31e-11!86;UBERON:0007284!3.31e-11!86;UBERON:0000467!5.95e-11!625;UBERON:0000468!6.76e-11!659;UBERON:0003104!7.94e-11!238;UBERON:0009142!7.94e-11!238;UBERON:0000480!8.03e-11!626;UBERON:0002780!9.43e-11!41;UBERON:0001890!9.43e-11!41;UBERON:0006240!9.43e-11!41;UBERON:0001007!1.11e-10!155;UBERON:0001555!1.11e-10!155;UBERON:0007026!1.11e-10!155;UBERON:0000955!1.96e-10!69;UBERON:0006238!1.96e-10!69;UBERON:0003080!3.06e-10!42;UBERON:0002020!3.76e-10!34;UBERON:0003528!3.76e-10!34;UBERON:0005256!4.23e-10!143;UBERON:0001893!5.23e-10!34;UBERON:0002346!5.92e-10!90;UBERON:0002791!1.17e-09!33;UBERON:0000025!1.57e-09!194;UBERON:0002385!1.85e-09!63;UBERON:0001015!1.85e-09!63;UBERON:0000383!1.85e-09!63;UBERON:0000914!1.91e-09!83;UBERON:0002329!1.91e-09!83;UBERON:0003077!1.91e-09!83;UBERON:0003059!1.91e-09!83;UBERON:0007282!1.91e-09!83;UBERON:0009618!1.91e-09!83;UBERON:0007285!1.91e-09!83;UBERON:0002050!2.40e-09!605;UBERON:0005423!2.40e-09!605;UBERON:0001017!2.81e-09!82;UBERON:0000922!2.89e-09!612;UBERON:0001869!3.19e-09!32;UBERON:0004119!3.44e-09!169;UBERON:0000925!3.44e-09!169;UBERON:0006595!3.44e-09!169;UBERON:0001135!4.13e-09!15;UBERON:0000923!4.77e-09!604;UBERON:0005291!4.77e-09!604;UBERON:0006598!4.77e-09!604;UBERON:0002532!4.77e-09!604;UBERON:0003056!7.28e-09!61;UBERON:0000483!7.67e-09!309;UBERON:0005743!1.25e-08!86;UBERON:0000119!1.96e-08!312;UBERON:0001134!2.12e-08!61;UBERON:0002036!2.12e-08!61;UBERON:0003082!2.12e-08!61;UBERON:0002619!6.35e-08!22;UBERON:0004921!8.75e-08!129;UBERON:0004185!8.75e-08!129;UBERON:0000063!9.72e-08!97;UBERON:0001950!3.67e-07!20;UBERON:0002100!3.77e-07!216;UBERON:0000073!4.51e-07!94;UBERON:0001016!4.51e-07!94;UBERON:0004121!8.43e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;3.38e-10;15!UBERON:0000160;3.83e-08;17!UBERON:0001737;5.53e-08;9!UBERON:0001557;5.53e-08;9!UBERON:0005409;6.57e-08;22!UBERON:0001555;1.15e-07;54!UBERON:0004921;2.34e-07;33!UBERON:0001893;2.80e-07;34!UBERON:0003528;3.09e-07;34!UBERON:0002020;3.09e-07;34!UBERON:0002420;3.95e-07;9!UBERON:0007245;3.95e-07;9!UBERON:0010009;3.95e-07;9!UBERON:0010011;3.95e-07;9!UBERON:0000454;3.95e-07;9!UBERON:0002791;5.24e-07;32!UBERON:0000125;5.74e-07;9!UBERON:0002308;5.74e-07;9!UBERON:0002780;6.94e-07;41!UBERON:0001890;6.94e-07;41!UBERON:0000059;9.70e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.65e-24,223;UBERON:0001007,7.03e-19,145;UBERON:0001555,7.03e-19,145;UBERON:0007026,7.03e-19,145;UBERON:0004119,1.53e-17,160;UBERON:0000925,1.53e-17,160;UBERON:0006595,1.53e-17,160;UBERON:0007023,4.80e-16,114;UBERON:0004921,8.69e-14,118;UBERON:0004111,7.62e-12,240;UBERON:0001049,5.34e-11,56;UBERON:0005068,5.34e-11,56;UBERON:0006241,5.34e-11,56;UBERON:0007135,5.34e-11,56;UBERON:0001135,3.19e-10,15;UBERON:0003075,5.48e-10,82;UBERON:0007284,5.48e-10,82;UBERON:0000073,1.03e-09,53;UBERON:0002616,1.03e-09,53;UBERON:0002780,4.70e-09,41;UBERON:0001890,4.70e-09,41;UBERON:0003080,4.70e-09,41;UBERON:0006240,4.70e-09,41;UBERON:0002346,5.52e-09,86;UBERON:0002385,1.23e-08,64;UBERON:0001015,1.23e-08,64;UBERON:0000383,1.23e-08,64;UBERON:0003528,1.31e-08,34;UBERON:0002020,1.31e-08,34;UBERON:0005256,1.58e-08,122;UBERON:0001893,1.83e-08,34;UBERON:0002050,2.00e-08,564;UBERON:0000923,2.20e-08,560;UBERON:0010316,2.20e-08,560;UBERON:0005291,2.20e-08,560;UBERON:0006598,2.20e-08,560;UBERON:0010317,2.20e-08,560;UBERON:0002532,2.20e-08,560;UBERON:0000160,3.84e-08,17;UBERON:0003056,4.07e-08,61;UBERON:0001737,5.86e-08,9;UBERON:0000955,6.45e-08,68;UBERON:0006238,6.45e-08,68;UBERON:0000025,6.56e-08,192;UBERON:0002791,1.17e-07,32;UBERON:0001869,1.44e-07,32;UBERON:0001134,1.77e-07,62;UBERON:0002036,1.77e-07,62;UBERON:0003082,1.77e-07,62;UBERON:0000483,1.85e-07,306;UBERON:0010314,2.58e-07,132;UBERON:0001017,2.98e-07,81;UBERON:0000119,3.64e-07,309;UBERON:0002420,4.34e-07,9;UBERON:0007245,4.34e-07,9;UBERON:0010009,4.34e-07,9;UBERON:0010011,4.34e-07,9;UBERON:0000454,4.34e-07,9;UBERON:0005423,5.19e-07,581;UBERON:0000125,5.65e-07,9;UBERON:0002308,5.65e-07,9;UBERON:0004573,6.16e-07,33;UBERON:0004571,6.16e-07,33;UBERON:0003104,8.55e-07,160;UBERON:0009142,8.55e-07,160;UBERON:0000059,9.61e-07,11 | |||
|phase1_expression=0,0,0,3.00219895059391,0.446961094427288,0,0,0,0.261185628199839,15.2355040630935,0.697801167972428,0,0,2.47532705920093,1.65698687863958,2.01697543935533,1.80808358407193,2.92124036154949,3.41552959153355,0.61560529038394,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0,0,15.7829785974744,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.42306505074684,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38336525463794,2.58152958673932,2.83734705758686,0,0,0,0,0.134710672069688,0.163461903113459,0,0,3.98346434117454,0,0,0,0,0.323745888736263,0.280901613404497,8.37032102145062,37.8329697320245,12.5024195222676,65.340157150513,31.4029000183767,0.910161361938026,0.718618141816238,22.7253753837989,28.7772595705518,13.0220134277566,15.8031943517102,1.22595118319608,18.7797573633246,0,1.4351170855109,1.49490172172997,2.7551147150743,2.70081986475962,2.88547081867629,1.28820270022815,1.48893485065272,0,0,1.7670364197088,2.02509777013059,10.0220555227663,0,0,2.03472710772585,0,0,0,0,0,0.580969714347592,0,0,0,0,0,0,0,0,4.25904480143438,5.56329477257736,3.13314338848527,3.97058301836618,5.01122721412534,4.27087114399974,4.31460186112526,3.53198637225623,3.46272441251751,0,0,2.4694440679884,0,1.26755034821831,0,2.95394953340702,0,0,4.97546649865724,0,0,0,0,10.7516740752407,64.4759566873339,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,5.42941206182667,0,0,2.92531928243358,2.08014873822732,0,0,0,47.0397599135305,0.542621605391443,0.823240336780769,0,39.09311436168,8.71147060226772,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9076596687656,0,0.271265023699736,1.87173775377726,0.535286966391485,0.946214490203608,3.27995961979597,0,0,1.03473071292505,0,0,2.86715927744673,0.979005787313703,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0,0,0.384417447767103,3.58195074346692,0.482561763430822,0,0.462629081407967,0,2.13530605635904,43.0981176222406,0.116210378459959,0,0,0,90.9330429463685,59.3617207701898,111.849125960389,0,0,0,0,0,0,1.02056223165909,0.215915916102139,0,1.62567862526312,0.501689773854853,0,0,0,0,0,0,0,0,23.5963916673284,0,0,0.574265537996172,0,3.21367859688319,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,9.761756535243,10.3888074454111,20.2140808346574,0,0.532306030317022,13.0489948811261,0.18532421910392,0,0.744316738719335,0,1.71567174531442,1.535386747868,2.99557291623744,5.72765846266686,1.56989728039846,72.8483453212425,62.0453687203484,49.4812089851883,1.01091240786658,3.17020642346017,1.26377536871694,46.8128389526007,3.89941583410055,4.22600587027022,73.1639525146804,92.054936201867,2.26016233240486,16.5409603063837,0.66343897524122,2.63070531152258,3.47265320560013,8.52663177660623,0,1.239293992399,0.845086807596724,2.58140433967293,0.294747123039363,0,8.15950447362375,0,0,45.1573076781201,34.9934720244983,0,0,0,19.7701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.51673541026282,0,0,0,1.39473591775749,30.9437985394885,0,0.818149460017238,0,0,0,0,0,62.342632362542,0,0,1.93866549219044,2.31920245404628,0,0,0,0,0,0,0,0,0,0,6.20018970069687,4.22087535188928,0,2.98564001814306,0.295547618953547,2.4132393686937,5.66480010298749,0,4.61701551022782,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8483817945122,39.5405313329926,47.0493211598892,0,0,0,1.88723172345896,0.802577647298789,2.10838001152805,0,0.19566461893209,0,0.789168805698781,16.9387002468129,0.30607276163049,0.252746318513952,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0.873633341210151,0,4.06376591414158,3.43519790305072,3.85942648150083,27.3509026497343,0,0,0,4.17300684576278,1.32952671507345,0,0,38.8484450425622,5.99428828746391,0,0,0,0,0,0.235694034616795,0,0,85.7805010321466,0,2.40168115483916,5.47621515567972,0,0,0,0,0,0,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0.795229689809303,4.90332262001672,0,0,0,0,0,1.94398581305679,0,0.236417121897595,0.157363764404994,0,13.9844124679619,0,0,0,0,1.08599920350743,9.50643640321395,0,0,0,2.72620834856675,63.4547712512704,1.02586563574658,2.65013777824443,1.93924434542326,3.70251284879532,0,0,49.0154223685719,99.0387122127895,91.5468312317302,1.48849806543585,0,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,4.50687350543399,0.573409195690071,3.88251680378983,4.28465180295546,0,0,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0.147855149989634,0.63718706865481,0.449803112163605,0.465788870628778,0,0,1.04349012362347,0.300515217994437,0.380805212168795,0,1.63663793282303,0.859284456339908,0.928067519756987,0.39809588869861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| |||
|short_description=p1@LOC400550 | |||
}} |
Revision as of 12:39, 20 January 2014
Short description: | p1@LOC400550 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC400550_5end |
Coexpression cluster: | C1770_normal_sacrococcigeal_tridermal_Prostate_Smooth_rectum_smooth |
Association with transcript: | 0bp_to_ENST00000501311, NR_033925, NR_036444, uc002fjk.1_5end |
EntrezGene: | LOC400550 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.05e-15 | 43 |
smooth muscle myoblast | 6.05e-15 | 43 |
muscle cell | 1.50e-09 | 55 |
muscle precursor cell | 1.37e-08 | 58 |
myoblast | 1.37e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.37e-08 | 58 |
electrically responsive cell | 9.71e-08 | 61 |
electrically active cell | 9.71e-08 | 61 |
vascular associated smooth muscle cell | 3.17e-07 | 32 |