FFCP PHASE1:Hg19::chr17:38613889..38613900,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:38613889..38613900,+ | |||
|id=chr17:38613889..38613900,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-14!180;CL:0000057!1.25e-10!75;CL:0000183!3.15e-10!59;CL:0000680!1.23e-08!57;CL:0000056!1.23e-08!57;CL:0000355!1.23e-08!57;CL:0000187!3.86e-08!54;CL:0000393!5.27e-08!60;CL:0000211!5.27e-08!60;CL:0000192!8.94e-08!42;CL:0000514!8.94e-08!42;CL:0000630!1.75e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000153;8.21e-12;9!CL:0000447;8.21e-12;9!CL:0000499;2.61e-10;28!CL:0000327;1.43e-09;15!CL:0002602;1.67e-09;2!CL:0002617;1.26e-08;2!CL:0000138;5.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.98e-12,9;CL:0000447,7.98e-12,9;CL:0000499,2.21e-10,28;CL:0000327,1.39e-09,15;CL:0002602,1.54e-09,2;CL:0002617,1.36e-08,2;CL:0000058,5.28e-07,6;CL:0000138,5.28e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.59e-11!216;UBERON:0005256!1.84e-10!143;UBERON:0000914!5.99e-10!83;UBERON:0002329!5.99e-10!83;UBERON:0003077!5.99e-10!83;UBERON:0003059!5.99e-10!83;UBERON:0007282!5.99e-10!83;UBERON:0009618!5.99e-10!83;UBERON:0007285!5.99e-10!83;UBERON:0001134!3.87e-08!61;UBERON:0002036!3.87e-08!61;UBERON:0003082!3.87e-08!61;UBERON:0004573!1.28e-07!33;UBERON:0004571!1.28e-07!33;UBERON:0002385!1.50e-07!63;UBERON:0001015!1.50e-07!63;UBERON:0000383!1.50e-07!63;UBERON:0004290!1.67e-07!70;UBERON:0003104!1.77e-07!238;UBERON:0009142!1.77e-07!238;UBERON:0002049!3.07e-07!79;UBERON:0007798!3.07e-07!79;UBERON:0001637!6.02e-07!42;UBERON:0003509!6.02e-07!42;UBERON:0004572!6.02e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;9.38e-19;8!UBERON:0000982;9.38e-19;8!UBERON:0004770;9.38e-19;8!UBERON:0011135;6.45e-14;5!UBERON:0002216;6.45e-14;5!UBERON:0011134;6.45e-14;5!UBERON:0002209;6.45e-14;5!UBERON:0002213;6.45e-14;5!UBERON:0007844;6.45e-14;5!UBERON:0011138;6.45e-14;5!UBERON:0001130;6.45e-14;5!UBERON:0001066;6.45e-14;5!UBERON:0001468;6.45e-14;5!UBERON:0006444;1.67e-09;2!UBERON:0001995;1.67e-09;2!UBERON:0004715;1.67e-09;2!UBERON:0000075;7.25e-09;16!UBERON:0004457;2.31e-07;9!UBERON:0000042;2.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.76e-19,8;UBERON:0000982,6.76e-19,8;UBERON:0004770,6.76e-19,8;UBERON:0011135,5.16e-14,5;UBERON:0002216,5.16e-14,5;UBERON:0011134,5.16e-14,5;UBERON:0002209,5.16e-14,5;UBERON:0002213,5.16e-14,5;UBERON:0005856,5.16e-14,5;UBERON:0005866,5.16e-14,5;UBERON:0005863,5.16e-14,5;UBERON:0007844,5.16e-14,5;UBERON:0011138,5.16e-14,5;UBERON:0001130,5.16e-14,5;UBERON:0001066,5.16e-14,5;UBERON:0001468,5.16e-14,5;UBERON:0006444,1.54e-09,2;UBERON:0001995,1.54e-09,2;UBERON:0004715,1.54e-09,2;UBERON:0000075,6.22e-09,16 | |||
|phase1_expression=1.2717486548939,1.2846031433459,0.281908808191942,1.0007329835313,0.893922188854576,2.61701557230111,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0,3.34169152992126,2.65117900582333,0,1.80808358407193,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,3.2529523714611,3.00802746381534,3.62116297402059,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,1.10298924103761,0,0.0892997282840798,0.673588117878509,0,0,0,0,0,0,0,0,0.506522046658319,0.264818361626438,0.286836620748814,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0,0,1.66493170409425,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,1.5324389789951,0.600952235626387,0.226864366320042,0.179389635688862,0.85422955527427,1.69545520927649,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0.168776332241266,0.0974370051611986,0.504867548488229,0.828449087780694,0.323292113637624,0.710019185033229,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,2.36315962672562,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.258543431515556,0,1.690605505112,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.479249710983165,0,0,1.59259437334337,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,5.50187573165645,0.271265023699736,1.03985430765404,2.49800584316026,2.05013139544115,0.819989904948992,0.601892199455438,0,0,0.664225598535437,0.184369168541703,1.56390506042549,1.17480694477644,0.343143423810856,0,0,0,0,0,0,1.73675465473144,0.460385919864187,0.561320188866147,1.15325234330131,0.511707249066704,0.804269605718038,0,0,0.532685175939381,0.492762936082855,0,0.232420756919918,0,0,0,0.803701137152247,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,3.21367859688319,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,2.51849877464512,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0.744316738719335,0.632758849437452,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0.359744915166629,0,0.117812402345686,1.01091240786658,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0,0,1.06428319221179,2.74439925886963,5.92730807327823,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,0,0,0,2.17727711363265,0,0,0,0.295930216910801,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,3.58936512288407,0.199679000498991,0,0.446342914883745,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0.342173675768659,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0.568209015825267,0.754703705257725,0.889811221596536,0.457680136793847,0.151230923763239,0.466311601748341,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0.265841714557995,1.04349012362347,0.150257608997218,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr17:38613889..38613900,+ | |||
}} |
Revision as of 15:11, 20 January 2014
Short description: | p@chr17:38613889..38613900, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613889..38613900, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.98e-12 | 9 |
carbohydrate secreting cell | 7.98e-12 | 9 |
stromal cell | 2.21e-10 | 28 |
extracellular matrix secreting cell | 1.39e-09 | 15 |
annulus pulposus cell | 1.54e-09 | 2 |
adipocyte of breast | 1.36e-08 | 2 |
chondroblast | 5.28e-07 | 6 |
chondrocyte | 5.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
articulation | 6.76e-19 | 8 |
skeletal joint | 6.76e-19 | 8 |
articular system | 6.76e-19 | 8 |
intervertebral cartilage | 5.16e-14 | 5 |
symphysis | 5.16e-14 | 5 |
nonsynovial joint | 5.16e-14 | 5 |
fibrous joint | 5.16e-14 | 5 |
cartilaginous joint | 5.16e-14 | 5 |
developing mesenchymal condensation | 5.16e-14 | 5 |
pre-cartilage condensation | 5.16e-14 | 5 |
cartilaginous condensation | 5.16e-14 | 5 |
cartilage element | 5.16e-14 | 5 |
post-cranial axial skeletal system | 5.16e-14 | 5 |
vertebral column | 5.16e-14 | 5 |
intervertebral disk | 5.16e-14 | 5 |
intervertebral joint | 5.16e-14 | 5 |
annulus fibrosus | 1.54e-09 | 2 |
fibrocartilage | 1.54e-09 | 2 |
annulus fibrosus disci intervertebralis | 1.54e-09 | 2 |
subdivision of skeletal system | 6.22e-09 | 16 |