FFCP PHASE1:Hg19::chr18:21494675..21494689,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21494675..21494689,+ | |||
|id=chr18:21494675..21494689,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.23e-22!254;CL:0002076!2.23e-19!43;CL:0002159!3.62e-14!13;CL:0000223!2.74e-13!59;CL:0002251!4.69e-12!21;CL:0002077!2.28e-08!33;CL:0002166!1.80e-07!3;CL:0002621!3.42e-07!3;CL:0002541!4.42e-07!3;CL:0000349!7.92e-07!3;CL:0002577!7.92e-07!3;CL:0002368!9.95e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.82e-19;14!CL:0002166;1.37e-18;3!CL:0002621;1.25e-17;3!CL:0000240;2.70e-15;6!CL:0000311;2.70e-15;6!CL:0000079;2.70e-15;6!CL:0000237;2.70e-15;6!CL:0002076;4.57e-15;42!CL:0002327;2.76e-13;4!CL:0000312;8.14e-11;5!CL:0002368;1.61e-10;13!CL:0000349;2.05e-10;19!CL:0000362;2.64e-10;9!CL:0002541;5.72e-09;3!CL:0002077;1.30e-08;34!CL:0002231;1.66e-08;3!CL:0002577;2.65e-08;3!CL:0002336;6.95e-07;1!CL:0002261;6.95e-07;1!CL:0002170;6.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.77e-19,14;CL:0002166,1.37e-18,3;CL:0002621,8.64e-18,3;CL:0002076,9.21e-17,42;CL:0000240,2.80e-15,6;CL:0000311,2.80e-15,6;CL:0000079,2.80e-15,6;CL:0000237,2.80e-15,6;CL:0000036,2.80e-15,6;CL:0000357,2.80e-15,6;CL:0000114,2.80e-15,6;CL:0002327,2.94e-13,4;CL:0000066,7.97e-13,253;CL:0000223,1.72e-11,58;CL:0000312,8.01e-11,5;CL:0002368,1.82e-10,13;CL:0000349,1.91e-10,19;CL:0000362,2.58e-10,9;CL:0002077,1.33e-09,34;CL:0002541,5.72e-09,3;CL:0002231,1.66e-08,3;CL:0002577,2.24e-08,3;CL:0002336,7.57e-07,1;CL:0002261,7.57e-07,1;CL:0002170,7.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;2.70e-15;6!CL:0000114;2.70e-15;6!CL:0000223;1.93e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!2.55e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.34e-15!14;UBERON:0000158!1.34e-15!14;UBERON:0000161!9.73e-11!35;UBERON:0003124!2.33e-10!7;UBERON:0004923!8.19e-10!57;UBERON:0000478!2.84e-09!24;UBERON:0004119!5.75e-09!169;UBERON:0000925!5.75e-09!169;UBERON:0006595!5.75e-09!169;UBERON:0001949!3.42e-07!3;UBERON:0000476!4.42e-07!3;UBERON:0000920!4.42e-07!3;UBERON:0000305!4.69e-07!7;UBERON:0005156!5.07e-07!59;UBERON:0000990!5.07e-07!59;UBERON:0000166!6.81e-07!21;UBERON:0003102!6.96e-07!95;UBERON:0003100!9.50e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.25e-17;3!UBERON:0001708;4.50e-14;4!UBERON:0008895;4.50e-14;4!UBERON:0001911;2.76e-13;4!UBERON:0000486;1.87e-11;12!UBERON:0011159;2.36e-11;5!UBERON:0005631;1.19e-09;10!UBERON:0000158;1.19e-09;10!UBERON:0003124;5.72e-09;3!UBERON:0000920;5.72e-09;3!UBERON:0000478;4.05e-08;24!UBERON:0010371;5.78e-08;31!UBERON:0003929;7.83e-08;7!UBERON:0003729;4.23e-07;13!UBERON:0003350;6.63e-07;8!UBERON:0001828;6.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,8.64e-18,3;UBERON:0005631,2.19e-14,14;UBERON:0000158,2.19e-14,14;UBERON:0001708,4.50e-14,4;UBERON:0008895,4.50e-14,4;UBERON:0003124,1.95e-13,7;UBERON:0001911,2.94e-13,4;UBERON:0005333,2.94e-13,4;UBERON:0008425,2.94e-13,4;UBERON:0005311,2.94e-13,4;UBERON:0011159,2.36e-11,5;UBERON:0010188,1.56e-09,6;UBERON:0002539,1.56e-09,6;UBERON:0008816,1.56e-09,6;UBERON:0000920,5.72e-09,3;UBERON:0004923,2.57e-08,66;UBERON:0000478,3.84e-08,24;UBERON:0003729,3.90e-07,13;UBERON:0003102,3.97e-07,99;UBERON:0003350,5.81e-07,8;UBERON:0001828,5.81e-07,8;UBERON:0000076,7.42e-07,8 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,5.7978255948989,4.90943017063502,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74375713521564,4.49607013030478,3.21692711717219,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56136837907439,16.4622485634882,6.66342957039216,4.03013352162817,2.61570544662566,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,3.32870879020994,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,12.0303882181971,1.28913384510255,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,5.95025695299521,3.0750410778417,1.40373983744043,2.023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,1.68471475667626,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,4.7748896947538,0.593929361665277,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,11.4840417503491,0.549585560411174,13.8589041764845,0,0,0,0,0,0,0,0,0.843992258112108,0.489698424477443,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0.391969589657511,0.261177619741208,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0.917142992608395,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,1.43325506366115,0.0714765441766563,0,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0.340853619036631,0,2.7492824225286,0,0,0.223710863595585,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,2.82315897372553,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:21494675..21494689,+ | |||
}} |
Revision as of 18:48, 20 January 2014
Short description: | p@chr18:21494675..21494689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr18:21494675..21494689, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.77e-19 | 14 |
epithelial cell of Malassez | 1.37e-18 | 3 |
gingival epithelial cell | 8.64e-18 | 3 |
endo-epithelial cell | 9.21e-17 | 42 |
stratified squamous epithelial cell | 2.80e-15 | 6 |
keratin accumulating cell | 2.80e-15 | 6 |
stratified epithelial cell | 2.80e-15 | 6 |
keratinizing barrier epithelial cell | 2.80e-15 | 6 |
epithelial fate stem cell | 2.80e-15 | 6 |
stratified epithelial stem cell | 2.80e-15 | 6 |
surface ectodermal cell | 2.80e-15 | 6 |
mammary gland epithelial cell | 2.94e-13 | 4 |
epithelial cell | 7.97e-13 | 253 |
endodermal cell | 1.72e-11 | 58 |
keratinocyte | 8.01e-11 | 5 |
respiratory epithelial cell | 1.82e-10 | 13 |
extraembryonic cell | 1.91e-10 | 19 |
epidermal cell | 2.58e-10 | 9 |
ecto-epithelial cell | 1.33e-09 | 34 |
chorionic membrane mesenchymal stem cell | 5.72e-09 | 3 |
epithelial cell of prostate | 1.66e-08 | 3 |
placental epithelial cell | 2.24e-08 | 3 |
buccal mucosa cell | 7.57e-07 | 1 |
endothelial cell of viscerocranial mucosa | 7.57e-07 | 1 |
keratinized cell of the oral mucosa | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 8.64e-18 | 3 |
extraembryonic membrane | 2.19e-14 | 14 |
membranous layer | 2.19e-14 | 14 |
jaw skeleton | 4.50e-14 | 4 |
splanchnocranium | 4.50e-14 | 4 |
chorion | 1.95e-13 | 7 |
mammary gland | 2.94e-13 | 4 |
mammary bud | 2.94e-13 | 4 |
mammary ridge | 2.94e-13 | 4 |
mammary placode | 2.94e-13 | 4 |
primary subdivision of cranial skeletal system | 2.36e-11 | 5 |
protuberance | 1.56e-09 | 6 |
pharyngeal arch | 1.56e-09 | 6 |
embryonic head | 1.56e-09 | 6 |
egg chorion | 5.72e-09 | 3 |
organ component layer | 2.57e-08 | 66 |
extraembryonic structure | 3.84e-08 | 24 |
mouth mucosa | 3.90e-07 | 13 |
surface structure | 3.97e-07 | 99 |
epithelium of mucosa | 5.81e-07 | 8 |
gingiva | 5.81e-07 | 8 |
external ectoderm | 7.42e-07 | 8 |