FFCP PHASE1:Hg19::chr19:1082814..1082874,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23526 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010dsd.1_5end | |||
|description=CAGE_peak_6_at_HMHA1_5end | |||
|id=chr19:1082814..1082874,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.25e-15;7!CL:0000586;3.25e-15;7!CL:0002322;1.30e-14;5!CL:0002621;1.40e-08;3!CL:0002327;6.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.88e-15,7;CL:0000586,3.88e-15,7;CL:0002322,1.92e-14,5;CL:0000066,4.19e-09,253;CL:0002621,1.05e-08,3;CL:0002327,6.07e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.14e-07;10!UBERON:0005564;4.14e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.93e-13;4!DOID:1612;2.93e-13;4!DOID:299;1.94e-08;25!DOID:3095;1.86e-07;22!DOID:2994;1.86e-07;22!DOID:3493;9.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.81e-13,4;DOID:1612,2.81e-13,4;DOID:299,2.03e-08,25;DOID:305,3.01e-08,106;DOID:0050687,1.23e-07,143;DOID:3095,1.90e-07,22;DOID:2994,1.90e-07,22;DOID:3493,9.71e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.80e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.20e-12;8!UBERON:0003135;4.33e-12;11!UBERON:0001949;1.40e-08;3!UBERON:0004921;1.91e-07;33!UBERON:0001911;6.80e-07;4!UBERON:0001829;9.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.66e-12,8;UBERON:0003135,5.31e-12,11;UBERON:0001949,1.05e-08,3;UBERON:0001911,6.07e-07,4;UBERON:0005333,6.07e-07,4;UBERON:0008425,6.07e-07,4;UBERON:0005311,6.07e-07,4;UBERON:0001829,8.16e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0.6024118375565,0,0.0774672005803016,0,0,0,0.401088894940283,0,0,0.647787332037959,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0,0.945928919554341,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0.639337125799041,0.989553900560148,0.598390972864896,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0.411202997999018,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0.473554504088034,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,1.45718115317017,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,1.43402297694502,3.78118489001746,1.06023814657188,3.137236457477,4.04278114559945,4.28945446488568,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,1.53650399572076,1.1240175325762,0.904760751704678,0.833296006426766,0,0,0,0,0,0,0,0,11.0628615714299,11.1603201072333,0,0,0,0,0.335964256397719,4.39502801451398,1.07470227243418,1.74380363108377,0.383382679165211,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.276242966807689,0,0,0,2.70719767744447,2.0794141018192,0,0,0,0,0,0,0,0.541892875087706,0,1.27438136522519,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0.661139661443912,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0.941438007767792,0.43050537267123,3.36942951335251,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0,1.29694662238543,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0.481764225311099,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0,0,0,8.79560539918633,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,7.0315495493013,5.85981999974511,0.724999575434793,0,0.254253650292766,4.49136595359079,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,5.30296980092538,0,5.75831071186643,0,0.183195186803725,0.533034776018635,1.02193298195737,0,0.166211681900156,0.676786981851542,0.980312671588698,0.335643173951685,0.37950746544837,0,0,0.326465616318295,0.141353071433941,0,1.99052386215701,9.99570478887733,1.83309043480088,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,2.76209081994573,1.20990716048664,0,0,0,0,0,0,0,0,18.7842300379663,0,5.38035188838906,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0.19871461170299,0,0,0,0.426905989478705,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4292366681637,0,0,0,0.964518890790115,0.275078873194468,0.415440338029185,0.2249738915515,0,0,0,0.236417121897595,1.04909176269996,0.528001682597033,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0.640724475406168,0.314408610199332,0.828478110694391,0,0,0,0,0,10.2782856549307,7.04594826555962,0.655745261419609,0.471162288750703,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,13.609702720853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,1.56302802246618,0,0.163771917510097,0.147856086217045,0,0,0,0,0,1.64477330057155,0,0,0,0.535701835878287,0,0,0.455324382702595,2.04015451374069,0,9.43184051905802,0,0,0,0,0.39246546425257,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0.316027223465453,0,3.99874026295933,0,0,0,0.691259661814092,7.31386509994472,0.118332000730565,0.0852134047591577,2.11693525095465,0,3.1020638566432,0,0,5.20196238160788,1.34109717480496,0,0,0,0.485710993059139,0,0,0,1.80713731262336,0.769583617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| |||
|short_description=p6@HMHA1 | |||
}} |
Revision as of 20:11, 20 January 2014
Short description: | p6@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HMHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010dsd.1_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.88e-15 | 7 |
germ cell | 3.88e-15 | 7 |
embryonic stem cell | 1.92e-14 | 5 |
epithelial cell | 4.19e-09 | 253 |
gingival epithelial cell | 1.05e-08 | 3 |
mammary gland epithelial cell | 6.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.66e-12 | 8 |
male reproductive organ | 5.31e-12 | 11 |
gingival epithelium | 1.05e-08 | 3 |
mammary gland | 6.07e-07 | 4 |
mammary bud | 6.07e-07 | 4 |
mammary ridge | 6.07e-07 | 4 |
mammary placode | 6.07e-07 | 4 |
major salivary gland | 8.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.81e-13 | 4 |
breast cancer | 2.81e-13 | 4 |
adenocarcinoma | 2.03e-08 | 25 |
carcinoma | 3.01e-08 | 106 |
cell type cancer | 1.23e-07 | 143 |
germ cell and embryonal cancer | 1.90e-07 | 22 |
germ cell cancer | 1.90e-07 | 22 |
signet ring cell adenocarcinoma | 9.71e-07 | 2 |