FFCP PHASE1:Hg19::chr19:10736157..10736169,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWA5 | |||
|association_with_transcript=-1bp_to_ENST00000335757,NM_020428,uc002mpf.2_5end | |||
|coexpression_cluster_id=C3745 | |||
|description=CAGE_peak_4_at_SLC44A2_5end | |||
|id=chr19:10736157..10736169,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.34e-24!254;CL:0002076!2.18e-08!43;CL:0002321!1.62e-07!248;CL:0000077!4.30e-07!19;CL:0000220!4.51e-07!246;CL:0000076!6.71e-07!62;CL:0000223!8.54e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.85e-09;19!CL:0000039;9.40e-08;7!CL:0000586;9.40e-08;7!CL:0002076;9.06e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.36e-22,253;CL:0000349,2.03e-09,19;CL:0002076,1.20e-07,42;CL:0000039,2.30e-07,7;CL:0000586,2.30e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.09e-12!106;DOID:0050687!8.62e-12!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.46e-10,143;DOID:305,4.73e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.66e-16!169;UBERON:0000925!4.66e-16!169;UBERON:0006595!4.66e-16!169;UBERON:0001007!5.55e-11!155;UBERON:0001555!5.55e-11!155;UBERON:0007026!5.55e-11!155;UBERON:0003104!1.83e-10!238;UBERON:0009142!1.83e-10!238;UBERON:0000481!2.46e-10!347;UBERON:0002100!4.42e-10!216;UBERON:0000077!7.13e-10!130;UBERON:0000064!9.32e-10!219;UBERON:0000468!2.47e-09!659;UBERON:0005911!2.47e-09!82;UBERON:0001004!3.03e-09!72;UBERON:0000475!5.31e-09!365;UBERON:0005156!6.65e-09!59;UBERON:0000990!6.65e-09!59;UBERON:0000065!7.48e-09!53;UBERON:0008947!1.71e-08!38;UBERON:0003258!1.71e-08!38;UBERON:0009569!3.24e-08!113;UBERON:0000464!9.67e-08!104;UBERON:0005153!9.80e-08!37;UBERON:0005157!1.69e-07!51;UBERON:0004921!1.78e-07!129;UBERON:0004185!1.78e-07!129;UBERON:0005631!2.89e-07!14;UBERON:0000158!2.89e-07!14;UBERON:0000915!3.51e-07!52;UBERON:0003101!4.55e-07!22;UBERON:0000079!4.55e-07!22;UBERON:0000466!5.33e-07!126;UBERON:0000062!5.48e-07!511;UBERON:0003133!6.37e-07!48;UBERON:0000072!6.84e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.89e-09;10!UBERON:0000158;2.89e-09;10!UBERON:0000478;2.95e-08;24!UBERON:0000486;7.18e-07;12!UBERON:0001987;7.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.47e-14,14;UBERON:0000158,3.47e-14,14;UBERON:0003124,9.34e-11,7;UBERON:0004119,1.05e-09,160;UBERON:0000925,1.05e-09,160;UBERON:0006595,1.05e-09,160;UBERON:0000478,3.22e-08,24;UBERON:0001008,1.03e-07,48;UBERON:0006554,3.71e-07,47;UBERON:0001987,6.77e-07,4;UBERON:0004340,6.77e-07,4 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0,2.7030733015166,20.9340350391728,2.62129646556207,2.90143676051299,0,0,0,0,0,0,0.369363174230364,1.42800483870977,0.940364164434263,0,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0.486634870302636,0.378139268656271,0,0,1.44076983047484,2.5500670180478,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,1.53316637465883,0,0,0,0,3.48875241714027,0,0.633152558322899,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0.204154171254893,0.122834317311768,0.413303124703062,0,0,0.910161361938026,0,0,0.125118519871964,0.831192346452549,0.877955241761676,0.612975591598039,0,0.453728732640084,1.25572744982203,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0.506328996723799,0,0.504867548488229,0,0,0.355009592516614,0.302256294682921,0,3.86521706326594,1.90922284413584,3.15485054927904,1.21973706129595,1.45782745153634,1.16193942869518,0.725627385107593,2.01856680700503,1.45990943630332,0,0,0,0,0,1.77460200059766,1.18009283054671,0.964044119533928,1.98529150918309,0.435758888184812,1.18635309555548,1.75280700608214,1.37355025587742,0.769494313892781,0,1.40241773803446,1.6462960453256,0,0,0,0.590789906681404,0,2.21379189377604,0.171567810298526,1.42675371031213,2.24803506515239,0.703702806881416,1.11106134190236,0,0,0,0.231860809950154,0.234817388471643,0.433099343283221,0,0.190254152234598,2.37061319387782,3.43394464837949,0,0,0,1.87467667973554,2.35174979478403,0.708875486211932,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0.714889968290738,0,2.46972101034231,0,0.355391948742546,0,0.602878754119172,0,1.19967589418468,0,0,0,0.239624855491583,0,0,0.868687840005475,0,1.25342674267927,0,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.892144943985809,1.57702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0,3.33440328590885,3.32870879020994,1.5119514666484,1.73675465473144,0.306923946576125,0.280660094433074,0.768834895534206,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0.846016147141356,2.6065841139427,1.28913384510255,0.34444334449382,0.364182336013434,0.131124414959424,9.47519187105565,6.54630365387526,0,0,0.633309773357254,0,0,0.215915916102139,0,1.08378575017541,0,8.6657932835313,12.4661401339309,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.9273691048295,0,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.435050081742686,0.340906509664404,0.534192213880424,0.495854746082934,1.15314040419064,2.04180339991335,1.0115778085555,0.464845549297286,0.94443704049192,1.3940745403212,0,0,0,0,0.143124886741991,0.744316738719335,0.632758849437452,1.71567174531442,0.767693373934002,0,0.318203247925937,0.78494864019923,0.539617372749944,0,0.235624804691373,0,0,0,0,0.974853958525138,0,0.272999822815972,0.565621727814851,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0.6196469961995,0.281695602532241,1.57752487424457,1.96498082026242,0.35667105148125,1.41904425628239,0.211107635297664,0,0.75894634753143,0,1.05844323998063,1.34060455107157,1.08890984861323,0.941438007767792,3.87454835404107,1.68471475667626,1.7737206141467,3.21612760289743,0,0,0,0,0,0,0,0,0,2.88743956579008,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,6.44610108791763,1.18785872333055,5.52889263778618,0.994147647766298,0,0,0,0.211125408127993,0,0.828851746593443,0,0.102268682502155,0,0,0.359473404589307,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,1.30213880542617,0.874599999961957,0,1.4793148277115,0.254253650292766,2.6002644994473,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.435753854075961,1.25481369850743,0.230850775511391,0.227884111694002,3.91958637459702,3.14151755434202,5.86695808378844,2.23300811812344,2.01514705484097,4.26427820814908,0,0,0,0,0,0,0,0,0,2.12202650606892,0.565412285735763,0,1.99052386215701,0.353830258013357,0,0,0,0,0.741412462787447,0.802577647298789,0.468528891450678,0,1.36965233252463,0.971121518136371,0.789168805698781,0,0,0.379119477770928,4.66002600184927,0.414752765588989,0,0,0,0,0.569219092059585,0,1.04135843001079,0.979923974143776,2.089420957929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| |||
|short_description=p4@SLC44A2 | |||
}} |
Revision as of 21:18, 20 January 2014
Short description: | p4@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC44A2_5end |
Coexpression cluster: | C3745_Alveolar_Renal_Placental_Amniotic_amniotic_choriocarcinoma_pancreatic |
Association with transcript: | -1bp_to_ENST00000335757, NM_020428, uc002mpf.2_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | Q8IWA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.36e-22 | 253 |
extraembryonic cell | 2.03e-09 | 19 |
endo-epithelial cell | 1.20e-07 | 42 |
germ line cell | 2.30e-07 | 7 |
germ cell | 2.30e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.47e-14 | 14 |
membranous layer | 3.47e-14 | 14 |
chorion | 9.34e-11 | 7 |
endoderm-derived structure | 1.05e-09 | 160 |
endoderm | 1.05e-09 | 160 |
presumptive endoderm | 1.05e-09 | 160 |
extraembryonic structure | 3.22e-08 | 24 |
renal system | 1.03e-07 | 48 |
urinary system structure | 3.71e-07 | 47 |
placenta | 6.77e-07 | 4 |
allantois | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.46e-10 | 143 |
carcinoma | 4.73e-09 | 106 |