FFCP PHASE1:Hg19::chr2:42448566..42448570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2051 | |||
|description=CAGE_peak_at_chr2:42448566..42448570,+ | |||
|id=chr2:42448566..42448570,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.52e-16!140;CL:0002087!3.30e-15!119;CL:0002031!1.78e-13!124;CL:0000037!1.82e-10!172;CL:0000566!1.82e-10!172;CL:0002057!7.49e-10!42;CL:0002032!5.31e-09!165;CL:0000837!5.31e-09!165;CL:0000988!1.56e-08!182;CL:0000860!1.73e-08!45;CL:0000838!2.97e-08!52;CL:0000542!6.85e-08!53;CL:0000051!6.85e-08!53;CL:0002009!2.36e-07!65;CL:0000766!2.53e-07!76;CL:0000791!5.30e-07!18;CL:0000789!5.30e-07!18;CL:0002420!5.30e-07!18;CL:0002419!5.30e-07!18;CL:0000790!5.30e-07!18;CL:0000624!8.81e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.19e-22;6!CL:0000791;1.65e-15;18!CL:0000789;1.65e-15;18!CL:0002419;1.65e-15;18!CL:0000623;5.38e-12;3!CL:0000226;9.32e-12;3!CL:0000842;9.32e-12;3!CL:0000898;1.60e-11;3!CL:0000775;2.25e-11;3!CL:0000084;1.14e-10;25!CL:0000542;6.23e-09;53!CL:0000815;4.00e-08;2!CL:0000792;4.00e-08;2!CL:0002677;4.00e-08;2!CL:0002087;3.11e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.12e-22,136;CL:0000624,1.89e-22,6;CL:0002087,1.57e-19,115;CL:0000037,8.74e-17,168;CL:0000791,1.19e-15,18;CL:0000789,1.19e-15,18;CL:0002420,1.19e-15,18;CL:0002419,1.19e-15,18;CL:0000790,1.19e-15,18;CL:0000988,1.63e-15,177;CL:0002031,1.99e-15,120;CL:0000838,1.01e-14,52;CL:0000542,2.27e-14,53;CL:0000051,2.27e-14,53;CL:0002032,5.47e-13,161;CL:0000837,5.47e-13,161;CL:0000623,5.12e-12,3;CL:0000825,5.12e-12,3;CL:0000226,8.88e-12,3;CL:0000842,8.88e-12,3;CL:0000898,9.20e-12,3;CL:0000775,1.23e-11,3;CL:0000084,9.09e-11,25;CL:0000827,9.09e-11,25;CL:0000815,2.25e-08,2;CL:0000792,2.25e-08,2;CL:0002677,2.25e-08,2;CL:0002393,7.46e-07,9;CL:0002397,7.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.65e-15;18!CL:0000051;6.23e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0002193!8.45e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.95e-07,98;UBERON:0003061,1.95e-07,98;UBERON:0002193,2.75e-07,108;UBERON:0002384,6.48e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.152826811495903,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0.284338464974843,0,3.32397245119126,18.450089167253,6.51032612147556,0,0,0.515151135268373,0,0,0.485168122375632,0,0.411167888021826,0.619412741790207,0,0,0.945928919554341,0.344745680736619,1.29096936716765,0,0.188242339542605,0.818718450173537,0.674170453335254,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0.426224750532694,0.580418477257168,2.26954089876456,1.24564449799115,0,1.5644487552606,2.17188844705117,0,0.368277635987565,1.26584954976354,0.633765858935825,0,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,1.14005097496499,0,0.182664153764634,0,0,1.77901850772711,0.426730222566507,0.400395987036012,0,0,0,4.55370375287559,1.76171156811282,2.6759125968766,0,0.560508562981536,0,4.52432471261816,14.9344089844683,3.28962398399215,0,1.95553359980154,0.946895611469467,0,0.334231370655521,2.3568472597987,1.10766947291811,0.270803863765016,0.512365278902701,2.08094956095805,0.493313713811028,0.552700035571697,0.289803085735052,1.63115219478266,1.07016331235885,0,0.793165398882963,2.29932296161153,2.40539211837841,2.27717722817553,0,0,0,0.150575119077773,0.255973222308837,2.49861453104692,0,0.821127996921047,0.403213486449465,9.09296665663925,5.79297615531196,0,0,0,0.361439152384566,0,0,0,0,0,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,0.476981248610684,1.14398982156026,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.891786973732369,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,1.37921532141349,10.1344960183973,5.00537841491019,0,0,0.773288812777695,0,0,1.49801404789436,5.9832291840805,1.65766205374414,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,1.24060815673732,6.25571182373989,2.77491650288955,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0.764637207142375,1.70894156152249,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.747768497892312,0,0.735120647943095,0,0.28853842595289,0.284567373393656,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.485442086998054,0.445773537109913,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0.796991953004279,0,0.251932747854276,0,0.492339221844278,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,2.3948309234694,1.11136990144637,0,0,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.461701551022782,0,0.23056390438806,0,0.217294743844016,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.202203398942031,0,0,0.547364367646998,0.586993856796269,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0.114536596165916,0.171594997861965,0.14405479798815,0.621262677827163,0,0.135904206073614,0.627617077873999,0,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,2.32991899054908,1.26053091691558,1.15382201733633,1.41547442093788,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,1.5476039091159,0.121499113316049,0,0.0788057072991982,0.209818352539992,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,1.19730191562487,0.164185041498678,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0.704815022316672,0.213574825135389,0.471612915298998,0,1.48849806543585,0,0.243585196761792,1.27668251554036,0,2.2562090462043,0.919036730290385,0.98361789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| |||
|short_description=p@chr2:42448566..42448570,+ | |||
}} |
Revision as of 02:47, 21 January 2014
Short description: | p@chr2:42448566..42448570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:42448566..42448570, + |
Coexpression cluster: | C2051_CD14_CD4_Natural_CD8_Neutrophils_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.12e-22 | 136 |
CD4-positive, alpha-beta T cell | 1.89e-22 | 6 |
nongranular leukocyte | 1.57e-19 | 115 |
hematopoietic stem cell | 8.74e-17 | 168 |
mature alpha-beta T cell | 1.19e-15 | 18 |
alpha-beta T cell | 1.19e-15 | 18 |
immature T cell | 1.19e-15 | 18 |
mature T cell | 1.19e-15 | 18 |
immature alpha-beta T cell | 1.19e-15 | 18 |
hematopoietic cell | 1.63e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.99e-15 | 120 |
lymphoid lineage restricted progenitor cell | 1.01e-14 | 52 |
lymphocyte | 2.27e-14 | 53 |
common lymphoid progenitor | 2.27e-14 | 53 |
hematopoietic oligopotent progenitor cell | 5.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-13 | 161 |
natural killer cell | 5.12e-12 | 3 |
pro-NK cell | 5.12e-12 | 3 |
single nucleate cell | 8.88e-12 | 3 |
mononuclear cell | 8.88e-12 | 3 |
naive T cell | 9.20e-12 | 3 |
neutrophil | 1.23e-11 | 3 |
T cell | 9.09e-11 | 25 |
pro-T cell | 9.09e-11 | 25 |
regulatory T cell | 2.25e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.25e-08 | 2 |
naive regulatory T cell | 2.25e-08 | 2 |
intermediate monocyte | 7.46e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.46e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.95e-07 | 98 |
blood island | 1.95e-07 | 98 |
hemolymphoid system | 2.75e-07 | 108 |
connective tissue | 6.48e-07 | 371 |