FFCP PHASE1:Hg19::chr2:135595869..135595875,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19288 | |||
|TSSclassifier=not | |||
|UniProt=Q8TDX5 | |||
|association_with_transcript=-241bp_to_ENST00000356140_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_5_at_ACMSD_5end | |||
|id=chr2:135595869..135595875,+ | |||
|ontology_enrichment_celltype=CL:1000507!5.46e-45!12;CL:1000494!5.46e-45!12;CL:1000497!1.84e-37!18;CL:0002518!1.84e-37!18;CL:1000449!1.58e-33!16;CL:0002681!1.96e-16!13;CL:0002584!1.96e-16!13;CL:0000239!1.50e-12!3;CL:1000615!1.50e-12!3;CL:0002306!1.50e-12!3;CL:0000181!3.60e-07!12;CL:0000417!3.60e-07!12;CL:0000668!3.60e-07!12;CL:0000414!3.60e-07!12;CL:0000412!3.60e-07!12;CL:0000182!3.60e-07!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.38e-19;11!UBERON:0009497;2.95e-16;13!UBERON:0003104;9.35e-16;31!UBERON:0001041;1.19e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!5.46e-45!12;UBERON:0001231!5.46e-45!12;UBERON:0004810!5.46e-45!12;UBERON:0002113!4.68e-44!27;UBERON:0003918!4.68e-44!27;UBERON:0005095!4.68e-44!27;UBERON:0007687!4.68e-44!27;UBERON:0005172!6.56e-43!55;UBERON:0005173!6.56e-43!55;UBERON:0006555!1.04e-39!17;UBERON:0005103!1.04e-39!17;UBERON:0000083!1.04e-39!17;UBERON:0009201!1.04e-39!17;UBERON:0004819!1.04e-39!17;UBERON:0006553!1.04e-39!17;UBERON:0003074!1.04e-39!17;UBERON:0003060!1.04e-39!17;UBERON:0002417!2.02e-38!61;UBERON:0000916!2.02e-38!61;UBERON:0000080!1.92e-37!18;UBERON:0002120!1.92e-37!18;UBERON:0004875!1.92e-37!18;UBERON:0005721!1.92e-37!18;UBERON:0005754!1.92e-37!18;UBERON:0007297!1.92e-37!18;UBERON:0000489!6.96e-37!32;UBERON:0004876!1.39e-33!20;UBERON:0004211!1.58e-33!16;UBERON:0001285!1.58e-33!16;UBERON:0007684!1.58e-33!16;UBERON:0003220!1.58e-33!16;UBERON:0004208!1.58e-33!16;UBERON:0003887!6.26e-32!21;UBERON:0006554!6.52e-31!44;UBERON:0001008!3.53e-30!45;UBERON:0000058!1.46e-25!26;UBERON:0003064!1.09e-21!37;UBERON:0005177!1.05e-20!107;UBERON:0009569!1.88e-19!113;UBERON:0001225!1.96e-16!13;UBERON:0008987!1.96e-16!13;UBERON:0003103!4.51e-16!69;UBERON:0001851!2.46e-13!16;UBERON:0006853!1.50e-12!3;UBERON:0007685!1.50e-12!3;UBERON:0004134!1.50e-12!3;UBERON:0000353!1.52e-12!17;UBERON:0003914!4.39e-12!118;UBERON:0002107!1.29e-11!19;UBERON:0006925!1.29e-11!19;UBERON:0008836!1.29e-11!19;UBERON:0000466!3.65e-11!126;UBERON:0005256!4.17e-11!143;UBERON:0002100!4.77e-10!216;UBERON:0008835!5.22e-10!22;UBERON:0003894!5.22e-10!22;UBERON:0003886!8.12e-10!63;UBERON:0001301!8.24e-10!1;UBERON:0009854!1.45e-09!23;UBERON:0003104!7.85e-09!238;UBERON:0009142!7.85e-09!238;UBERON:0007499!8.73e-09!25;UBERON:0009497!8.73e-09!25;UBERON:0000015!8.73e-09!25;UBERON:0002423!8.73e-09!25;UBERON:0006235!8.73e-09!25;UBERON:0004161!8.73e-09!25;UBERON:0002553!1.05e-08!70;UBERON:0005057!1.93e-08!26;UBERON:0009856!1.93e-08!26;UBERON:0002365!4.80e-07!31;UBERON:0002330!4.80e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;5.80e-14;52!UBERON:0005173;5.80e-14;52!UBERON:0002107;1.77e-11;19!UBERON:0006925;1.77e-11;19!UBERON:0002113;2.51e-09;24!UBERON:0011143;2.51e-09;24!UBERON:0002423;5.60e-09;25!UBERON:0000489;6.79e-08;29!UBERON:0006554;1.15e-07;30!UBERON:0001008;1.15e-07;30!UBERON:0002365;3.63e-07;31!UBERON:0002330;3.63e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0002107,1.81e-11,19;UBERON:0006925,1.81e-11,19;UBERON:0008836,1.81e-11,19;UBERON:0008835,4.74e-10,22;UBERON:0003894,4.74e-10,22;UBERON:0009854,1.17e-09,23;UBERON:0007499,5.71e-09,25;UBERON:0009497,5.71e-09,25;UBERON:0000015,5.71e-09,25;UBERON:0002423,5.71e-09,25;UBERON:0006235,5.71e-09,25;UBERON:0004161,5.71e-09,25;UBERON:0002113,1.07e-08,26;UBERON:0003918,1.07e-08,26;UBERON:0011143,1.07e-08,26;UBERON:0005095,1.07e-08,26;UBERON:0007687,1.07e-08,26;UBERON:0005177,1.11e-08,101;UBERON:0009856,1.15e-08,26;UBERON:0009569,6.64e-08,112;UBERON:0000489,1.86e-07,31;UBERON:0002365,1.99e-07,31;UBERON:0002330,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,4.01909107225911,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ACMSD | |||
}} |
Revision as of 05:32, 21 January 2014
Short description: | p5@ACMSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACMSD_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -241bp_to_ENST00000356140_5end |
EntrezGene: | ACMSD |
HGNC: | 19288 |
UniProt: | Q8TDX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
liver | 1.81e-11 | 19 |
digestive gland | 1.81e-11 | 19 |
liver bud | 1.81e-11 | 19 |
hepatic diverticulum | 4.74e-10 | 22 |
liver primordium | 4.74e-10 | 22 |
digestive tract diverticulum | 1.17e-09 | 23 |
epithelial sac | 5.71e-09 | 25 |
epithelium of foregut-midgut junction | 5.71e-09 | 25 |
anatomical boundary | 5.71e-09 | 25 |
hepatobiliary system | 5.71e-09 | 25 |
foregut-midgut junction | 5.71e-09 | 25 |
septum transversum | 5.71e-09 | 25 |
kidney | 1.07e-08 | 26 |
kidney mesenchyme | 1.07e-08 | 26 |
upper urinary tract | 1.07e-08 | 26 |
kidney rudiment | 1.07e-08 | 26 |
kidney field | 1.07e-08 | 26 |
trunk region element | 1.11e-08 | 101 |
sac | 1.15e-08 | 26 |
subdivision of trunk | 6.64e-08 | 112 |
cavitated compound organ | 1.86e-07 | 31 |
exocrine gland | 1.99e-07 | 31 |
exocrine system | 1.99e-07 | 31 |