FFCP PHASE1:Hg19::chr20:9495209..9495256,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |||
|association_with_transcript=-14bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |||
|coexpression_cluster_id=C2627 | |||
|description=CAGE_peak_1_at_LAMP5_5end | |||
|id=chr20:9495209..9495256,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.72e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.65e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.48e-13;82!UBERON:0006241;1.85e-07;3!UBERON:0003057;1.85e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.13e-47!57;UBERON:0005068!2.13e-47!57;UBERON:0006241!2.13e-47!57;UBERON:0007135!2.13e-47!57;UBERON:0007023!5.47e-44!115;UBERON:0001017!6.16e-40!82;UBERON:0000955!5.34e-39!69;UBERON:0006238!5.34e-39!69;UBERON:0002616!7.07e-39!59;UBERON:0005743!1.17e-38!86;UBERON:0000073!2.12e-37!94;UBERON:0001016!2.12e-37!94;UBERON:0002780!3.59e-34!41;UBERON:0001890!3.59e-34!41;UBERON:0006240!3.59e-34!41;UBERON:0003075!2.12e-33!86;UBERON:0007284!2.12e-33!86;UBERON:0003080!5.08e-33!42;UBERON:0002346!5.85e-31!90;UBERON:0001869!8.34e-29!32;UBERON:0001893!2.21e-28!34;UBERON:0002020!2.88e-28!34;UBERON:0003528!2.88e-28!34;UBERON:0000153!5.73e-28!129;UBERON:0007811!5.73e-28!129;UBERON:0002791!2.34e-27!33;UBERON:0000033!1.67e-26!123;UBERON:0002619!4.99e-23!22;UBERON:0004121!8.35e-23!169;UBERON:0003056!6.88e-22!61;UBERON:0000924!1.11e-21!173;UBERON:0006601!1.11e-21!173;UBERON:0000956!5.23e-21!25;UBERON:0000203!5.23e-21!25;UBERON:0001950!8.74e-21!20;UBERON:0003076!3.31e-15!15;UBERON:0003057!3.31e-15!15;UBERON:0004732!4.66e-13!13;UBERON:0004733!3.20e-12!12;UBERON:0002028!3.20e-12!12;UBERON:0007277!3.20e-12!12;UBERON:0001871!1.31e-09!7;UBERON:0002420!2.19e-09!9;UBERON:0007245!2.19e-09!9;UBERON:0010009!2.19e-09!9;UBERON:0010011!2.19e-09!9;UBERON:0000454!2.19e-09!9;UBERON:0002680!2.82e-09!9;UBERON:0001895!2.82e-09!9;UBERON:0010092!2.82e-09!9;UBERON:0004111!3.54e-09!241;UBERON:0000477!6.33e-09!286;UBERON:0002308!1.13e-08!9;UBERON:0000125!1.13e-08!9;UBERON:0000200!4.40e-08!6;UBERON:0000025!1.07e-07!194;UBERON:0000349!1.86e-07!5;UBERON:0001894!3.79e-07!7;UBERON:0006222!3.79e-07!7;UBERON:0009663!4.93e-07!7;UBERON:0001872!9.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.92e-45;32!UBERON:0002791;3.41e-42;32!UBERON:0001893;2.68e-41;34!UBERON:0003528;2.97e-41;34!UBERON:0002020;2.97e-41;34!UBERON:0002619;6.10e-41;22!UBERON:0001950;1.42e-36;20!UBERON:0000956;1.76e-35;25!UBERON:0000203;1.76e-35;25!UBERON:0002780;1.77e-33;41!UBERON:0001890;1.77e-33;41!UBERON:0000073;2.49e-32;53!UBERON:0002616;2.49e-32;53!UBERON:0000955;4.04e-24;68!UBERON:0001017;4.62e-24;75!UBERON:0001016;4.94e-21;83!UBERON:0002420;2.50e-17;9!UBERON:0007245;2.50e-17;9!UBERON:0010009;2.50e-17;9!UBERON:0010011;2.50e-17;9!UBERON:0000454;2.50e-17;9!UBERON:0004732;3.01e-15;13!UBERON:0000200;3.00e-14;6!UBERON:0004733;1.12e-13;12!UBERON:0002028;1.12e-13;12!UBERON:0000125;3.42e-13;9!UBERON:0002308;3.42e-13;9!UBERON:0000349;4.88e-13;5!UBERON:0009663;9.83e-13;7!UBERON:0001871;2.76e-12;6!UBERON:0001872;1.32e-11;5!UBERON:0000369;4.05e-11;4!UBERON:0002435;4.05e-11;4!UBERON:0000204;4.05e-11;4!UBERON:0002298;5.51e-10;6!UBERON:0007023;8.16e-10;114!UBERON:0011216;2.19e-09;132!UBERON:0005383;7.85e-09;3!UBERON:0005382;7.85e-09;3!UBERON:0002680;1.73e-08;9!UBERON:0001895;1.73e-08;9!UBERON:0001870;6.95e-08;3!UBERON:0002021;7.60e-08;5!UBERON:0002240;1.85e-07;3!UBERON:0005174;1.85e-07;3!UBERON:0001137;1.85e-07;3!UBERON:0001896;2.00e-07;3!UBERON:0005290;2.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.19e-66,56;UBERON:0005068,6.19e-66,56;UBERON:0006241,6.19e-66,56;UBERON:0007135,6.19e-66,56;UBERON:0000073,4.27e-60,53;UBERON:0002616,4.27e-60,53;UBERON:0000955,2.29e-51,68;UBERON:0006238,2.29e-51,68;UBERON:0001016,2.72e-51,89;UBERON:0001017,7.77e-51,81;UBERON:0001869,1.54e-50,32;UBERON:0003528,1.94e-47,34;UBERON:0002020,1.94e-47,34;UBERON:0001893,3.78e-47,34;UBERON:0002780,3.90e-47,41;UBERON:0001890,3.90e-47,41;UBERON:0003080,3.90e-47,41;UBERON:0006240,3.90e-47,41;UBERON:0002791,8.24e-47,32;UBERON:0003075,1.45e-45,82;UBERON:0007284,1.45e-45,82;UBERON:0002346,7.27e-43,86;UBERON:0002619,6.05e-41,22;UBERON:0001950,1.42e-36,20;UBERON:0000956,1.75e-35,25;UBERON:0000203,1.75e-35,25;UBERON:0010371,2.79e-33,104;UBERON:0007023,3.77e-33,114;UBERON:0003056,5.43e-33,61;UBERON:0010314,1.24e-27,132;UBERON:0004121,9.90e-23,171;UBERON:0000924,9.90e-23,171;UBERON:0006601,9.90e-23,171;UBERON:0003076,3.71e-19,15;UBERON:0003057,3.71e-19,15;UBERON:0011216,1.75e-18,223;UBERON:0002420,2.56e-17,9;UBERON:0007245,2.56e-17,9;UBERON:0010009,2.56e-17,9;UBERON:0010011,2.56e-17,9;UBERON:0000454,2.56e-17,9;UBERON:0004732,3.04e-15,13;UBERON:0000200,2.87e-14,6;UBERON:0004733,1.12e-13,12;UBERON:0002028,1.12e-13,12;UBERON:0007277,1.12e-13,12;UBERON:0000125,3.49e-13,9;UBERON:0002308,3.49e-13,9;UBERON:0000349,4.71e-13,5;UBERON:0009663,1.00e-12,7;UBERON:0000025,1.82e-12,192;UBERON:0001871,2.96e-12,6;UBERON:0001872,1.16e-11,5;UBERON:0000369,4.01e-11,4;UBERON:0002435,4.01e-11,4;UBERON:0000204,4.01e-11,4;UBERON:0010082,4.01e-11,4;UBERON:0002298,5.41e-10,6;UBERON:0004111,1.04e-09,240;UBERON:0005383,7.95e-09,3;UBERON:0005382,7.95e-09,3;UBERON:0002680,1.74e-08,9;UBERON:0001895,1.74e-08,9;UBERON:0010092,1.74e-08,9;UBERON:0001870,7.20e-08,3;UBERON:0002021,7.74e-08,5;UBERON:0002240,1.69e-07,3;UBERON:0005174,1.69e-07,3;UBERON:0001137,1.69e-07,3;UBERON:0001896,1.98e-07,3;UBERON:0005290,1.98e-07,3;UBERON:0010096,1.98e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,1.35433163884467,0.612002073732759,4.07491137921514,0.286235987131057,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,1.70692089026603,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0,0.0945348171640679,0,0,2.75056058545197,0,0,0,0,0,27.4264217951143,49.191562327091,18.9443325678078,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,2.63386572528503,0.919463387397059,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,1.55491582523056,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,5.19719211939866,25.9271887042902,20.1669401368674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,2.20844685094452,0,0,0,0.535286966391485,0.157702415033935,0.819989904948992,0,0,0,0,0,0,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.6091675761773,0.626719583092093,0,0,61.6658208398206,133.995005574856,19.588926933755,0,19.6634089157413,24.3806957602733,20.3555952888528,33.4113643137489,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6488588659779,45.9988991662377,0,0,8.86726714137573,0.19924798825107,0.552567831062295,0,0.102268682502155,0,0,0.0898683511473268,0,157.564290029877,0.0986434056369336,0,0,21.3253204140948,17.8114748470754,3.99227596002388,0,0,0,0,0,0,0,0.874813840149763,0,35.4296554325536,84.4175070377856,1.52581736317083,0.552896299656123,2.95547618953547,30.7139556015562,0,0,1.92375646259493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,3.66618086960175,0,0,0,0.808813595768125,4.01288823649394,26.4718823669633,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0.379119477770928,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,4.51961481561065,0,0,17.6004012757343,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0,21.0147101048426,3.55953985119182,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,29.466319558893,63.6183751847443,15.9357985150543,0,0.137539436597234,0,0,0,22.173588180179,0,0.394028536495991,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.851940108927109,0.113312091520126,0.146552233678082,0,37.3627743884881,0.26446520348538,0,0,0,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0,31.0123862988445,32.4589864639222,14.271766100541,8.60113793535107,9.761756535243,14.8410403029906,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.973596699725,0,0,0,0,0,0.211312123358627,0,0.106691729694141,32.2042011965725,0,0.552317850755522,0,0,0,18.1145683146425,0,19.5485252363705,0,0,0,0,0,0,0,0,0,32.9495924744837,17.0035891590702,6.2257205032289,28.1009419009834,0,18.395829155482,13.2410029418118,1.42769420259154,0,0,0,0,0,0,0,2.18109952212846,0,0,0,0,0,15.1959565391388,24.2134210570293,20.4619928536172,11.7953406960667,1.64092442705466,0,0,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0.227662191351298,0,1.38280785066935,0,35.548170346883,20.6526508987346,0,0,0.078493092850514,109.038219401705,0,1.82631744101899,0,0,4.14563956224607,0,0,0,0,0,0.51215543128185,0.691259661814092,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.971421986118279,0,1.59160620129095,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0.471353094203252,20.6123890470693,2.97046400327086,14.792950465419,0,0.375935671919414,0.580120991762195,0,0,0,0,0,0.458729283404541,0,0,26.3806981940749,0.872701380680755,2.1161073620616,0,0.924351257262837,0,0.504665699340316,0,0,0,0,0,0,0.151557396436479,0.803892390468535,5.80418607621146,6.20597975171371,0.426467963801962,1.1903221573187,0.387533459016037,0.186224142887574,0,0,1.61693751166575,0.217716747896961,0.684466602170562,0.26940821205835,0.215166616178029,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,1.20764276154616,4.80852738454849 | |||
|short_description=p1@LAMP5 | |||
}} |
Revision as of 10:14, 21 January 2014
Short description: | p1@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMP5_5end |
Coexpression cluster: | C2627_biphenotypic_acute_putamen_caudate_Dendritic_hippocampus_amygdala |
Association with transcript: | -14bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.65e-08 | 3 |