FFCP PHASE1:Hg19::chr20:30310752..30310763,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=598 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=992 | |||
|TSSclassifier=strong | |||
|UniProt=Q07817 | |||
|association_with_transcript=-47bp_to_ENST00000420653_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_13_at_BCL2L1_5end | |||
|id=chr20:30310752..30310763,- | |||
|ontology_enrichment_celltype=CL:0000066!2.33e-16!254;CL:0002321!9.21e-11!248;CL:0000220!1.18e-10!246;CL:1000449!4.07e-07!16;CL:0000223!4.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.79e-12;15!CL:1000507;1.62e-11;10!CL:1000494;1.62e-11;10!CL:1000497;1.68e-10;17!CL:0002518;1.68e-10;17!CL:0002681;3.32e-09;12!CL:0002584;3.32e-09;12!CL:0000239;7.11e-08;3!CL:1000615;7.11e-08;3!CL:0002306;7.11e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,5.52e-12,15;CL:1000507,1.95e-11,10;CL:1000494,1.95e-11,10;CL:1000497,2.32e-10,17;CL:0002518,2.32e-10,17;CL:0002681,4.65e-09,12;CL:0002584,4.65e-09,12;CL:0000239,4.67e-08,3;CL:1000615,4.67e-08,3;CL:0002306,4.67e-08,3;CL:0000066,6.58e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.90e-13!312;UBERON:0000483!7.44e-13!309;UBERON:0000481!1.95e-07!347;UBERON:0004211!4.07e-07!16;UBERON:0001285!4.07e-07!16;UBERON:0007684!4.07e-07!16;UBERON:0003220!4.07e-07!16;UBERON:0004208!4.07e-07!16;UBERON:0000490!5.76e-07!138;UBERON:0000475!7.10e-07!365;UBERON:0000480!8.27e-07!626;UBERON:0000467!9.73e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.31e-14;15!UBERON:0000179;4.31e-14;15!UBERON:0000463;4.31e-14;15!UBERON:0006555;3.79e-12;15!UBERON:0004819;3.79e-12;15!UBERON:0001285;3.79e-12;15!UBERON:0007684;3.79e-12;15!UBERON:0004211;1.62e-11;10!UBERON:0009773;1.62e-11;10!UBERON:0001231;1.62e-11;10!UBERON:0004810;1.62e-11;10!UBERON:0002390;1.46e-09;32!UBERON:0000353;2.95e-09;15!UBERON:0001225;3.32e-09;12!UBERON:0008987;3.32e-09;12!UBERON:0006853;7.11e-08;3!UBERON:0007685;7.11e-08;3!UBERON:0004134;7.11e-08;3!UBERON:0001851;3.78e-07;15!UBERON:0002113;6.37e-07;24!UBERON:0011143;6.37e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.48e-14,15;UBERON:0000179,4.48e-14,15;UBERON:0000463,4.48e-14,15;UBERON:0004211,5.52e-12,15;UBERON:0009773,5.52e-12,15;UBERON:0001231,5.52e-12,15;UBERON:0001285,5.52e-12,15;UBERON:0007684,5.52e-12,15;UBERON:0004208,5.52e-12,15;UBERON:0004810,1.95e-11,10;UBERON:0006555,4.03e-11,16;UBERON:0004819,4.03e-11,16;UBERON:0000353,3.63e-09,15;UBERON:0001225,4.65e-09,12;UBERON:0008987,4.65e-09,12;UBERON:0006853,4.67e-08,3;UBERON:0007685,4.67e-08,3;UBERON:0004134,4.67e-08,3;UBERON:0006554,3.85e-07,47;UBERON:0005177,4.18e-07,101;UBERON:0001851,4.90e-07,15;UBERON:0001008,6.29e-07,48;UBERON:0005172,6.65e-07,54;UBERON:0005173,6.65e-07,54 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.491467873003018,5.58240934377942,0.218441372130172,0.527533956456907,0.495065411840187,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.861847406537515,1.83600622119828,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0.164201178899891,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.327447688744282,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0.993812036833525,2.58070378531837,0.347140501607594,1.13061588384802,0.838998872419812,0.550236083880135,0.417989933073621,0.516833518338658,0.71153252537342,0.33472061276467,1.20848795132744,0.760272105718513,0.24406205754817,1.47065232138347,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0.570471821544449,1.34503812496621,0.23486899728753,0.161872944368132,0.280901613404497,1.22492502752936,0.122834317311768,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0,0.250237039743928,1.10825646193673,0,0,0,0.453728732640084,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.302256294682921,0.169560592310488,0.193260853163297,0.818238361772504,0.573609190778008,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,1.8448265781467,1.02940686179115,0.658501712451753,0,0.201057944823262,0.370353780634118,0.977424915930974,0,0,0.34779121492523,0.234817388471643,0.577465791044295,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0.626909658919938,1.16253575405585,0.383382679165211,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0.600686115687835,0.285826432630578,1.00917975910825,0,0.36669142910475,0,0,0.845302752556,0,0,0.514414748524284,2.83698264046557,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0.828831026872071,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0.426910231213777,0.909382714338778,1.66435439510497,0.30239029332968,0,0.460385919864187,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0.355123450626254,0.246381468041427,0,0.348631135379878,1.69203229428271,0.40101294060657,1.65745780084613,0.34444334449382,0.182091168006717,0,0.902399225814824,0.616122696835318,3.92174884588428,4.38417673959782,0.633309773357254,1.13733384070897,0,0.863663664408557,0,1.35473218771926,1.00337954770971,1.27438136522519,1.66215201785745,1.34324852833307,5.48149691614836,4.44440266742331,0.769350375349168,0.656029291399411,0.325378394664303,0.309123034943167,0,0.082509499920588,1.14853107599234,0,0,0.096670718292122,0.462145851343933,0.460511024178389,0.827019434907183,0.107420244868274,0,0.340906509664404,0.178064071293475,0,0,0.382838137483752,0.30347334256665,0,0.31481234683064,0.6970372701606,1.84820148105653,1.06461206063404,0.869932992075073,0.18532421910392,0.286249773483982,0,1.58189712359363,0.190630193923825,1.535386747868,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.117812402345686,1.01091240786658,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0,0.438450885253763,1.15755106853338,0,0.811641507850816,0.30982349809975,0,0.143411352204052,0.196498082026242,1.426684205925,0,0,0,0.75894634753143,0,0.48111056362756,0.670302275535787,0,0.282431402330337,0.86101074534246,1.68471475667626,0.886860307073351,0.229723400206959,73.5799033386646,74.1698090928104,42.153891850888,12.1498205483472,13.9863172849306,48.6354983394538,70.744118278193,59.4843882220703,0.320472213382419,0,0.980160863924127,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,1.08182271390393,0.33307196799782,1.4098700508785,0.37428108081644,0,0,0.334330152832435,1.13654458722565,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0.333926115068718,0,0.211125408127993,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0.629078458031288,0.358042349351218,0,0.295930216910801,35.922463852041,4.44547960578548,0,0.18553619632370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| |||
|short_description=p13@BCL2L1 | |||
}} |
Revision as of 10:42, 21 January 2014
Short description: | p13@BCL2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_BCL2L1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -47bp_to_ENST00000420653_5end |
EntrezGene: | BCL2L1 |
HGNC: | 992 |
UniProt: | Q07817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 5.52e-12 | 15 |
kidney tubule cell | 1.95e-11 | 10 |
nephron tubule epithelial cell | 1.95e-11 | 10 |
kidney cell | 2.32e-10 | 17 |
kidney epithelial cell | 2.32e-10 | 17 |
kidney cortical cell | 4.65e-09 | 12 |
renal cortical epithelial cell | 4.65e-09 | 12 |
brush border epithelial cell | 4.67e-08 | 3 |
kidney cortex tubule cell | 4.67e-08 | 3 |
epithelial cell of proximal tubule | 4.67e-08 | 3 |
epithelial cell | 6.58e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood | 4.48e-14 | 15 |
haemolymphatic fluid | 4.48e-14 | 15 |
organism substance | 4.48e-14 | 15 |
nephron epithelium | 5.52e-12 | 15 |
renal tubule | 5.52e-12 | 15 |
nephron tubule | 5.52e-12 | 15 |
nephron | 5.52e-12 | 15 |
uriniferous tubule | 5.52e-12 | 15 |
nephrogenic mesenchyme | 5.52e-12 | 15 |
nephron tubule epithelium | 1.95e-11 | 10 |
excretory tube | 4.03e-11 | 16 |
kidney epithelium | 4.03e-11 | 16 |
parenchyma | 3.63e-09 | 15 |
cortex of kidney | 4.65e-09 | 12 |
renal parenchyma | 4.65e-09 | 12 |
renal cortex tubule | 4.67e-08 | 3 |
region of nephron tubule | 4.67e-08 | 3 |
proximal tubule | 4.67e-08 | 3 |
urinary system structure | 3.85e-07 | 47 |
trunk region element | 4.18e-07 | 101 |
cortex | 4.90e-07 | 15 |
renal system | 6.29e-07 | 48 |
abdomen element | 6.65e-07 | 54 |
abdominal segment element | 6.65e-07 | 54 |