FFCP PHASE1:Hg19::chr3:16215714..16215728,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117248 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21531 | |||
|TSSclassifier=not | |||
|UniProt=Q8N3T1 | |||
|association_with_transcript=-427bp_to_ENST00000339732_5end | |||
|coexpression_cluster_id=C372 | |||
|description=CAGE_peak_9_at_GALNTL2_5end | |||
|id=chr3:16215714..16215728,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.69e-28;3!UBERON:0003057;8.69e-28;3!UBERON:0010122;3.89e-11;2!UBERON:0006601;7.02e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-43!115;UBERON:0001049!5.66e-33!57;UBERON:0005068!5.66e-33!57;UBERON:0006241!5.66e-33!57;UBERON:0007135!5.66e-33!57;UBERON:0002616!3.46e-24!59;UBERON:0001017!3.39e-22!82;UBERON:0000955!2.59e-21!69;UBERON:0006238!2.59e-21!69;UBERON:0005743!7.91e-21!86;UBERON:0002780!2.66e-20!41;UBERON:0001890!2.66e-20!41;UBERON:0006240!2.66e-20!41;UBERON:0003080!1.03e-19!42;UBERON:0003075!2.12e-19!86;UBERON:0007284!2.12e-19!86;UBERON:0002298!3.15e-18!8;UBERON:0002346!3.24e-18!90;UBERON:0000073!3.61e-18!94;UBERON:0001016!3.61e-18!94;UBERON:0002020!2.75e-17!34;UBERON:0003528!2.75e-17!34;UBERON:0001893!2.75e-17!34;UBERON:0002308!5.91e-16!9;UBERON:0000125!5.91e-16!9;UBERON:0002791!9.47e-16!33;UBERON:0003076!2.75e-15!15;UBERON:0003057!2.75e-15!15;UBERON:0001869!1.05e-13!32;UBERON:0000033!3.18e-12!123;UBERON:0003056!3.62e-12!61;UBERON:0002420!5.42e-12!9;UBERON:0007245!5.42e-12!9;UBERON:0010009!5.42e-12!9;UBERON:0010011!5.42e-12!9;UBERON:0000454!5.42e-12!9;UBERON:0000153!2.49e-11!129;UBERON:0007811!2.49e-11!129;UBERON:0009663!3.26e-11!7;UBERON:0001896!1.14e-10!3;UBERON:0005290!1.14e-10!3;UBERON:0010096!1.14e-10!3;UBERON:0002240!2.18e-10!3;UBERON:0006331!1.35e-09!3;UBERON:0004121!2.25e-09!169;UBERON:0000988!3.51e-09!3;UBERON:0000924!5.49e-09!173;UBERON:0006601!5.49e-09!173;UBERON:0004733!1.17e-08!12;UBERON:0002028!1.17e-08!12;UBERON:0007277!1.17e-08!12;UBERON:0002619!3.39e-08!22;UBERON:0004111!5.94e-08!241;UBERON:0004732!6.22e-08!13;UBERON:0001875!2.11e-07!2;UBERON:0006514!2.11e-07!2;UBERON:0001897!2.25e-07!2;UBERON:0000200!2.39e-07!6;UBERON:0000025!2.57e-07!194;UBERON:0000475!2.74e-07!365;UBERON:0001873!3.05e-07!2;UBERON:0010122!3.05e-07!2;UBERON:0000956!4.57e-07!25;UBERON:0000203!4.57e-07!25;UBERON:0001954!4.79e-07!2;UBERON:0003022!4.79e-07!2;UBERON:0002421!4.79e-07!2;UBERON:0002600!4.79e-07!2;UBERON:0000477!6.19e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.46e-60;3!UBERON:0005290;4.46e-60;3!UBERON:0002298;1.68e-30;6!UBERON:0002240;8.69e-28;3!UBERON:0005174;8.69e-28;3!UBERON:0001137;8.69e-28;3!UBERON:0009663;9.23e-26;7!UBERON:0002038;6.98e-21;1!UBERON:0009661;6.98e-21;1!UBERON:0002950;6.98e-21;1!UBERON:0001891;6.98e-21;1!UBERON:0002420;3.25e-20;9!UBERON:0000125;3.25e-20;9!UBERON:0007245;3.25e-20;9!UBERON:0002308;3.25e-20;9!UBERON:0010009;3.25e-20;9!UBERON:0010011;3.25e-20;9!UBERON:0000454;3.25e-20;9!UBERON:0004733;1.23e-15;12!UBERON:0002028;1.23e-15;12!UBERON:0004732;1.73e-14;13!UBERON:0000073;6.04e-13;53!UBERON:0002616;6.04e-13;53!UBERON:0001897;2.88e-11;2!UBERON:0010225;2.88e-11;2!UBERON:0001873;3.89e-11;2!UBERON:0001875;3.89e-11;2!UBERON:0006514;3.89e-11;2!UBERON:0001017;6.21e-08;75!UBERON:0005383;7.50e-08;3!UBERON:0005382;7.50e-08;3!UBERON:0001016;3.52e-07;83!UBERON:0000955;6.02e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.65e-60,3;UBERON:0005290,3.65e-60,3;UBERON:0010096,3.65e-60,3;UBERON:0003076,2.03e-33,15;UBERON:0003057,2.03e-33,15;UBERON:0002298,1.52e-30,6;UBERON:0002240,9.30e-28,3;UBERON:0005174,9.30e-28,3;UBERON:0001137,9.30e-28,3;UBERON:0001049,9.51e-28,56;UBERON:0005068,9.51e-28,56;UBERON:0006241,9.51e-28,56;UBERON:0007135,9.51e-28,56;UBERON:0009663,8.85e-26,7;UBERON:0002038,9.43e-21,1;UBERON:0009661,9.43e-21,1;UBERON:0002950,9.43e-21,1;UBERON:0001891,9.43e-21,1;UBERON:0009616,9.43e-21,1;UBERON:0010286,9.43e-21,1;UBERON:0002420,3.14e-20,9;UBERON:0000125,3.14e-20,9;UBERON:0007245,3.14e-20,9;UBERON:0002308,3.14e-20,9;UBERON:0010009,3.14e-20,9;UBERON:0010011,3.14e-20,9;UBERON:0000454,3.14e-20,9;UBERON:0001017,5.75e-19,81;UBERON:0003075,5.75e-19,82;UBERON:0007284,5.75e-19,82;UBERON:0002346,4.44e-18,86;UBERON:0000073,9.95e-18,53;UBERON:0002616,9.95e-18,53;UBERON:0001016,4.46e-17,89;UBERON:0007023,5.86e-17,114;UBERON:0004733,1.17e-15,12;UBERON:0002028,1.17e-15,12;UBERON:0007277,1.17e-15,12;UBERON:0010371,6.45e-15,104;UBERON:0004732,1.65e-14,13;UBERON:0000955,1.23e-13,68;UBERON:0006238,1.23e-13,68;UBERON:0010314,1.10e-11,132;UBERON:0001897,3.02e-11,2;UBERON:0010225,3.02e-11,2;UBERON:0001873,3.35e-11,2;UBERON:0010122,3.35e-11,2;UBERON:0001875,3.70e-11,2;UBERON:0006514,3.70e-11,2;UBERON:0004121,8.15e-09,171;UBERON:0000924,8.15e-09,171;UBERON:0006601,8.15e-09,171;UBERON:0005383,6.78e-08,3;UBERON:0005382,6.78e-08,3;UBERON:0000025,6.82e-08,192;UBERON:0002780,7.50e-08,41;UBERON:0001890,7.50e-08,41;UBERON:0003080,7.50e-08,41;UBERON:0006240,7.50e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.64286454670392,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,2.86704597845036,3.43880059764242,5.65077266766589,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0,0.887023701626388,0,0,0.271878931907327,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10402014498858,26.7341760294377,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,2.48750831837634,0.517164979309476,0,0,0,0,0,0.190941474834495,0,0,0,0,0.502055437748735,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | |||
|short_description=p9@GALNTL2 | |||
}} |
Revision as of 17:41, 21 January 2014
Short description: | p9@GALNTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GALNTL2_5end |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | -427bp_to_ENST00000339732_5end |
EntrezGene: | GALNTL2 |
HGNC: | 21531 |
UniProt: | Q8N3T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data