FFCP PHASE1:Hg19::chr3:112931594..112931615,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:112931594..112931615,- | |||
|id=chr3:112931594..112931615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.99e-09;1!CL:0002625;8.99e-09;1!CL:0000216;8.99e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.52e-09,1;CL:0002625,4.52e-09,1;CL:0000216,4.52e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.26e-11;3!UBERON:0010115;3.17e-09;1!UBERON:0005425;8.99e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-40!115;UBERON:0001049!1.88e-30!57;UBERON:0005068!1.88e-30!57;UBERON:0006241!1.88e-30!57;UBERON:0007135!1.88e-30!57;UBERON:0001017!9.39e-30!82;UBERON:0005743!4.71e-29!86;UBERON:0002616!1.27e-28!59;UBERON:0000073!1.49e-28!94;UBERON:0001016!1.49e-28!94;UBERON:0002346!3.44e-27!90;UBERON:0000955!1.14e-26!69;UBERON:0006238!1.14e-26!69;UBERON:0003075!1.25e-26!86;UBERON:0007284!1.25e-26!86;UBERON:0003080!2.41e-20!42;UBERON:0002780!3.08e-19!41;UBERON:0001890!3.08e-19!41;UBERON:0006240!3.08e-19!41;UBERON:0000153!3.78e-19!129;UBERON:0007811!3.78e-19!129;UBERON:0000033!3.07e-18!123;UBERON:0001869!5.38e-18!32;UBERON:0001893!7.25e-18!34;UBERON:0003056!2.95e-17!61;UBERON:0002791!4.17e-17!33;UBERON:0002020!1.10e-16!34;UBERON:0003528!1.10e-16!34;UBERON:0000924!4.14e-16!173;UBERON:0006601!4.14e-16!173;UBERON:0000956!1.51e-15!25;UBERON:0000203!1.51e-15!25;UBERON:0004121!1.81e-15!169;UBERON:0002619!5.48e-15!22;UBERON:0000475!4.31e-13!365;UBERON:0001950!6.71e-13!20;UBERON:0003076!2.01e-11!15;UBERON:0003057!2.01e-11!15;UBERON:0004732!1.93e-09!13;UBERON:0000468!2.00e-08!659;UBERON:0004733!2.71e-08!12;UBERON:0002028!2.71e-08!12;UBERON:0007277!2.71e-08!12;UBERON:0000477!6.45e-08!286;UBERON:0000062!6.88e-08!511;UBERON:0004111!3.10e-07!241;UBERON:0000481!3.72e-07!347;UBERON:0000200!6.53e-07!6;UBERON:0000119!7.97e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.82e-16;2!UBERON:0002363;3.17e-09;1!UBERON:0005795;8.99e-09;1!UBERON:0001000;8.99e-09;1!UBERON:0000996;8.99e-09;1!UBERON:0001136;8.99e-09;1!UBERON:0000941;8.99e-09;1!UBERON:0001343;8.99e-09;1!UBERON:0001785;8.99e-09;1!UBERON:0002464;8.99e-09;1!UBERON:0004904;8.99e-09;1!UBERON:0001021;8.99e-09;1!UBERON:0004910;8.99e-09;1!UBERON:0004813;8.99e-09;1!UBERON:0005352;8.99e-09;1!UBERON:0003296;2.30e-08;4!UBERON:0010133;2.30e-08;4!UBERON:0005904;2.30e-08;4!UBERON:0002050;7.46e-07;5!UBERON:0005423;7.46e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.08e-15,2;UBERON:0007023,1.41e-13,114;UBERON:0002363,3.06e-09,1;UBERON:0007645,3.06e-09,1;UBERON:0007647,3.06e-09,1;UBERON:0010115,3.06e-09,1;UBERON:0001136,4.52e-09,1;UBERON:0001343,4.52e-09,1;UBERON:0004910,4.52e-09,1;UBERON:0005154,4.52e-09,1;UBERON:0005295,4.52e-09,1;UBERON:0004813,4.52e-09,1;UBERON:0005297,4.52e-09,1;UBERON:0005294,4.52e-09,1;UBERON:0010141,4.52e-09,1;UBERON:0005891,4.52e-09,1;UBERON:0000941,6.16e-09,1;UBERON:0001785,6.16e-09,1;UBERON:0002464,6.16e-09,1;UBERON:0004904,6.16e-09,1;UBERON:0001021,6.16e-09,1;UBERON:0003902,6.16e-09,1;UBERON:0005425,6.16e-09,1;UBERON:0000996,6.65e-09,1;UBERON:0001000,1.32e-08,1;UBERON:0005352,1.32e-08,1;UBERON:0005904,1.99e-08,4;UBERON:0004122,2.97e-08,15;UBERON:0003296,3.72e-08,4;UBERON:0010133,3.72e-08,4 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,1.25381888591235,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0,0.315404830067869,0.468565659970853,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.984685914873589,0.222617410045812,0,0,0.19924798825107,0.828851746593443,0,0.20453736500431,0,0,0,0,0,1.1837208676432,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0.347249989866585,0.885741385813839,0.241192877250816,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,1.00035336054936,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,0,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0,0,0,0,1.18375320854817,0,0.30607276163049,2.84339608328196,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,0.451961481561065,0.137041924646751,0,0.50648636764703,0,0,0.426905989478705,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0.953423842781029,0,0,0,0,0.77380195455795,0.546746009922222,0,0.0788057072991982,0.314727528809989,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.775697738169303,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.366078794705889,0.625954653532499,1.14681839138014,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,1.31051565830417,0.169732529954025,1.48802444071178,0,0,0,0,0,0.352675943690684,0,0.642292250964595,0,0.319267718114302,0.205116364240755,0.252071696221718,0.345786262321089,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,1.12815492523886,0.20170506870352,0,0,0,0,0.270150338473579,0,1.2401207790071,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,1.21393120847326,1.13831095675649,0.0887023701626388,0,0,0.40781839786099,0.197318320688547,0.236387681767936,0,1.96232732126285,0.157115589916002,0,0,0,0,1.21510125100316,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,1.22574160876953,0,0.981542335574726,0.594092800654172,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.407948941145488,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0.20686599172379,0.213233981900981,1.66645102024618,0,0.186224142887574,0,0.12729431655633,0,0.217716747896961,0.684466602170562,0.0673520530145875,0.143444410785353,1.33064142618405,0,0,0,0,0,0.488965776731466,1.22068853494722,1.33151354837103,0.603821380773079,0 | |||
|short_description=p@chr3:112931594..112931615,- | |||
}} |
Revision as of 20:35, 21 January 2014
Short description: | p@chr3:112931594..112931615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112931594..112931615, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.52e-09 | 1 |
seminiferous tubule epithelial cell | 4.52e-09 | 1 |
Sertoli cell | 4.52e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.08e-15 | 2 |
adult organism | 1.41e-13 | 114 |
dura mater | 3.06e-09 | 1 |
future meninx | 3.06e-09 | 1 |
ectomeninx | 3.06e-09 | 1 |
future dura mater | 3.06e-09 | 1 |
mesothelium | 4.52e-09 | 1 |
seminiferous tubule of testis | 4.52e-09 | 1 |
epithelium of male gonad | 4.52e-09 | 1 |
epithelial cord | 4.52e-09 | 1 |
sex cord | 4.52e-09 | 1 |
seminiferous tubule epithelium | 4.52e-09 | 1 |
testis sex cord | 4.52e-09 | 1 |
genital ridge | 4.52e-09 | 1 |
primitive sex cord of indifferent gonad | 4.52e-09 | 1 |
coelomic epithelium | 4.52e-09 | 1 |
cranial nerve II | 6.16e-09 | 1 |
cranial nerve | 6.16e-09 | 1 |
nerve trunk | 6.16e-09 | 1 |
nerve connecting eye with brain | 6.16e-09 | 1 |
nerve | 6.16e-09 | 1 |
retinal neural layer | 6.16e-09 | 1 |
presumptive neural retina | 6.16e-09 | 1 |
vagina | 6.65e-09 | 1 |
vas deferens | 1.32e-08 | 1 |
spermatic cord | 1.32e-08 | 1 |
duct of male reproductive system | 1.99e-08 | 4 |
genitourinary system | 2.97e-08 | 15 |
gland of diencephalon | 3.72e-08 | 4 |
neuroendocrine gland | 3.72e-08 | 4 |