FFCP PHASE1:Hg19::chr4:4388727..4388736,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000513829_5end | |||
|coexpression_cluster_id=C4417 | |||
|description=CAGE_peak_5_at_D4S234E_5end | |||
|id=chr4:4388727..4388736,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.04e-13;4!CL:0000731;3.04e-13;4!CL:0002577;4.18e-11;3!CL:0002504;2.51e-10;3!CL:1000279;2.51e-10;3!CL:1000280;2.51e-10;3!CL:0000148;2.65e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.52e-13,4;CL:0000731,2.52e-13,4;CL:0002577,5.41e-11,3;CL:0002504,2.92e-10,3;CL:1000279,2.92e-10,3;CL:1000280,2.92e-10,3;CL:0000148,2.42e-08,10;CL:0000541,2.42e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.76e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.34e-25!94;UBERON:0001016!1.34e-25!94;UBERON:0001017!2.85e-25!82;UBERON:0005743!2.16e-24!86;UBERON:0001049!5.79e-23!57;UBERON:0005068!5.79e-23!57;UBERON:0006241!5.79e-23!57;UBERON:0007135!5.79e-23!57;UBERON:0004121!8.61e-23!169;UBERON:0000924!2.12e-22!173;UBERON:0006601!2.12e-22!173;UBERON:0002616!3.55e-22!59;UBERON:0000955!7.30e-22!69;UBERON:0006238!7.30e-22!69;UBERON:0007023!1.21e-17!115;UBERON:0003075!2.04e-17!86;UBERON:0007284!2.04e-17!86;UBERON:0000153!3.52e-17!129;UBERON:0007811!3.52e-17!129;UBERON:0000033!7.43e-17!123;UBERON:0002346!9.02e-17!90;UBERON:0002780!1.38e-16!41;UBERON:0001890!1.38e-16!41;UBERON:0006240!1.38e-16!41;UBERON:0003080!6.03e-16!42;UBERON:0002020!6.76e-16!34;UBERON:0003528!6.76e-16!34;UBERON:0001893!1.83e-15!34;UBERON:0002791!1.13e-14!33;UBERON:0001869!2.22e-14!32;UBERON:0001950!6.72e-13!20;UBERON:0002619!2.09e-12!22;UBERON:0003056!1.64e-11!61;UBERON:0000956!2.95e-10!25;UBERON:0000203!2.95e-10!25;UBERON:0000064!7.32e-10!219;UBERON:0003076!2.49e-08!15;UBERON:0003057!2.49e-08!15;UBERON:0000483!6.98e-08!309;UBERON:0000119!1.41e-07!312;UBERON:0002308!1.73e-07!9;UBERON:0000125!1.73e-07!9;UBERON:0004733!2.18e-07!12;UBERON:0002028!2.18e-07!12;UBERON:0007277!2.18e-07!12;UBERON:0000922!6.05e-07!612;UBERON:0000062!7.13e-07!511;UBERON:0000467!7.70e-07!625;UBERON:0002298!8.57e-07!8;UBERON:0002050!9.05e-07!605;UBERON:0005423!9.05e-07!605;UBERON:0000480!9.22e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;1.41e-16;12!UBERON:0002028;1.41e-16;12!UBERON:0004732;3.40e-15;13!UBERON:0000073;2.50e-14;53!UBERON:0002616;2.50e-14;53!UBERON:0001987;7.41e-14;4!UBERON:0002298;1.45e-13;6!UBERON:0002680;3.84e-13;9!UBERON:0001895;3.84e-13;9!UBERON:0000125;2.08e-12;9!UBERON:0002308;2.08e-12;9!UBERON:0000955;2.49e-12;68!UBERON:0003528;9.64e-12;34!UBERON:0002020;9.64e-12;34!UBERON:0000988;7.91e-11;3!UBERON:0001017;1.14e-10;75!UBERON:0000365;1.31e-10;5!UBERON:0002780;2.79e-10;41!UBERON:0001890;2.79e-10;41!UBERON:0001016;1.07e-09;83!UBERON:0001869;2.04e-09;32!UBERON:0002791;2.04e-09;32!UBERON:0005910;7.55e-09;6!UBERON:0001893;5.96e-08;34!UBERON:0000369;7.54e-08;4!UBERON:0002435;7.54e-08;4!UBERON:0000204;7.54e-08;4!UBERON:0000007;1.50e-07;2!UBERON:0002148;1.50e-07;2!UBERON:0006331;1.50e-07;2!UBERON:0009662;1.50e-07;2!UBERON:0009663;1.67e-07;7!UBERON:0001950;8.66e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.94e-25,56;UBERON:0005068,9.94e-25,56;UBERON:0006241,9.94e-25,56;UBERON:0007135,9.94e-25,56;UBERON:0000073,6.26e-24,53;UBERON:0002616,6.26e-24,53;UBERON:0001017,2.73e-22,81;UBERON:0001016,3.10e-21,89;UBERON:0000955,4.06e-19,68;UBERON:0006238,4.06e-19,68;UBERON:0004733,8.42e-17,12;UBERON:0002028,8.42e-17,12;UBERON:0007277,8.42e-17,12;UBERON:0003076,1.17e-16,15;UBERON:0003057,1.17e-16,15;UBERON:0003075,1.31e-16,82;UBERON:0007284,1.31e-16,82;UBERON:0010371,1.03e-15,104;UBERON:0002346,1.45e-15,86;UBERON:0004732,2.12e-15,13;UBERON:0011216,1.48e-14,223;UBERON:0002298,9.11e-14,6;UBERON:0001987,1.11e-13,4;UBERON:0004340,1.11e-13,4;UBERON:0004121,2.14e-13,171;UBERON:0000924,2.14e-13,171;UBERON:0006601,2.14e-13,171;UBERON:0002680,3.36e-13,9;UBERON:0001895,3.36e-13,9;UBERON:0010092,3.36e-13,9;UBERON:0003528,7.22e-13,34;UBERON:0002020,7.22e-13,34;UBERON:0000125,3.17e-12,9;UBERON:0002308,3.17e-12,9;UBERON:0002780,5.37e-12,41;UBERON:0001890,5.37e-12,41;UBERON:0003080,5.37e-12,41;UBERON:0006240,5.37e-12,41;UBERON:0000988,8.09e-11,3;UBERON:0000365,1.13e-10,5;UBERON:0010314,4.26e-10,132;UBERON:0002791,1.01e-09,32;UBERON:0001869,1.01e-09,32;UBERON:0001893,4.87e-09,34;UBERON:0005910,6.69e-09,6;UBERON:0000483,4.49e-08,306;UBERON:0005631,4.90e-08,14;UBERON:0000158,4.90e-08,14;UBERON:0000119,6.59e-08,309;UBERON:0003124,7.91e-08,7;UBERON:0000369,9.97e-08,4;UBERON:0002435,9.97e-08,4;UBERON:0000204,9.97e-08,4;UBERON:0010082,9.97e-08,4;UBERON:0000007,1.19e-07,2;UBERON:0002148,1.46e-07,2;UBERON:0006331,1.46e-07,2;UBERON:0009662,1.46e-07,2;UBERON:0007023,1.94e-07,114;UBERON:0009663,2.43e-07,7;UBERON:0003056,3.89e-07,61;UBERON:0001950,6.58e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,0,0.436882744260345,2.11013582582763,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,2.51699661725944,0,0.626984899610432,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0.538842688278752,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,1.14721838155602,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.658501712451753,0,0.603173834469785,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,0.283550194484773,0.179117045405697,0,0.766765358330422,0,0,0,0.144119953416961,0,0.952468414382536,1.90994212779139,0,3.4214489204541,1.33675740514321,2.10240140490742,8.57479297891735,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,1.06617584622764,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,3.90419561572865,0.773288812777695,2.51274398001523,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,1.21251028578504,4.99306318531491,4.83824469327489,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,1.20303882181971,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0.170453254832202,0,0,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,1.43897966066652,2.74537029736055,1.06031162111118,0,0,0,2.43816869544795,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0.564862804660675,1.29151611801369,3.36942951335251,1.7737206141467,1.37834040124176,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.427296284509893,0,0,0.371606350251437,0.577076851905779,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.07875276582847,0,0,0.562677665642051,0,0,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.834912883456661,5.98841394003583,0,0,0,0,0,0,0.344743373241465,0.874813840149763,0,0,1.32656082487949,1.52581736317083,2.43274371848694,10.6397142823277,0.87754158861589,0,0,0.153900517007594,0,0.46112780877612,0,0.869178975376065,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.337005664903385,0,1.40558667435203,0,0,0,0,0,3.0607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0.886351143382302,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0.798716001995964,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.485996453264197,0.335434687599266,0.0788057072991982,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,2.24795422962573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0.3755727921195,1.72022758707021,0.776503360757966,1.67660287941735,0.138348634936231,0.74988244777264,0.151649117541648,1.14186133417987,0,0,0.579684114443301,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.419638523158333,0,0.76736622782191,0,0.786329709279482,0.327628914576042,0,0,0.371807292777007,3.35186950783946,0,0,0,0,13.1685555261876,1.15612605173627,2.8339315265117,0.478901577171454,0.615349092722265,5.04143392443436,0.760729777106397,0.484426936895553,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.945526184657525,0,0.413373593002368,0.697573912132975,1.64092442705466,0,0,0,0,0,0,2.42786241694653,1.59363533945908,1.33053555243958,0,0,3.19457744991109,1.38122824481983,0,0,0,2.51384943865603,0,0.913158720509496,0,0,0.714765441766563,0,0.348724276104376,0,0,0.62164849248911,0.3414369541879,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0.79062257427272,0.329821550236287,0,0.154348316215889,0.218559560503957,0,0,0.471353094203252,0.981542335574726,0,2.113278637917,0,0,0,0.399764623699716,0.178553938605658,0,0,0,0,0.286679166302903,0.157771562193185,1.49581278420012,6.54526035510566,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0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| |||
|short_description=p5@D4S234E | |||
}} |
Revision as of 00:00, 22 January 2014
Short description: | p5@D4S234E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_D4S234E_5end |
Coexpression cluster: | C4417_normal_duodenum_brain_temporal_pituitary_putamen_Placental |
Association with transcript: | -29bp_to_ENST00000513829_5end |
EntrezGene: | D4S234E |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.52e-13 | 4 |
urothelial cell | 2.52e-13 | 4 |
placental epithelial cell | 5.41e-11 | 3 |
enteric smooth muscle cell | 2.92e-10 | 3 |
smooth muscle cell of large intestine | 2.92e-10 | 3 |
smooth muscle cell of colon | 2.92e-10 | 3 |
melanocyte | 2.42e-08 | 10 |
melanoblast | 2.42e-08 | 10 |