FFCP PHASE1:Hg19::chr5:140797208..140797219,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8714 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5F8 | |||
|association_with_transcript=0bp_to_NM_032101_5end | |||
|description=CAGE_peak_2_at_PCDHGB7_5end | |||
|id=chr5:140797208..140797219,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.92e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,9.24e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.75e-14!115;UBERON:0000468!1.15e-13!659;UBERON:0000475!1.26e-13!365;UBERON:0003075!5.45e-13!86;UBERON:0007284!5.45e-13!86;UBERON:0002346!2.85e-12!90;UBERON:0000467!3.55e-11!625;UBERON:0000481!4.11e-11!347;UBERON:0000480!5.03e-11!626;UBERON:0000153!5.13e-11!129;UBERON:0007811!5.13e-11!129;UBERON:0000477!6.04e-11!286;UBERON:0001049!6.40e-11!57;UBERON:0005068!6.40e-11!57;UBERON:0006241!6.40e-11!57;UBERON:0007135!6.40e-11!57;UBERON:0005743!9.46e-11!86;UBERON:0000033!1.27e-10!123;UBERON:0004111!1.53e-10!241;UBERON:0004121!2.97e-10!169;UBERON:0000073!3.63e-10!94;UBERON:0001016!3.63e-10!94;UBERON:0000924!6.43e-10!173;UBERON:0006601!6.43e-10!173;UBERON:0001017!1.01e-09!82;UBERON:0000922!2.86e-08!612;UBERON:0002616!3.13e-08!59;UBERON:0000923!3.80e-08!604;UBERON:0005291!3.80e-08!604;UBERON:0006598!3.80e-08!604;UBERON:0002532!3.80e-08!604;UBERON:0002050!5.10e-08!605;UBERON:0005423!5.10e-08!605;UBERON:0000955!6.27e-08!69;UBERON:0006238!6.27e-08!69;UBERON:0002780!8.23e-08!41;UBERON:0001890!8.23e-08!41;UBERON:0006240!8.23e-08!41;UBERON:0000119!9.60e-08!312;UBERON:0003056!9.79e-08!61;UBERON:0000483!1.09e-07!309;UBERON:0000025!2.04e-07!194;UBERON:0003080!2.21e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.00e-10;4!UBERON:0010133;5.00e-10;4!UBERON:0001905;1.49e-09;2!UBERON:0002757;1.49e-09;2!UBERON:0010134;1.49e-09;2!UBERON:0005408;1.49e-09;2!UBERON:0001899;1.49e-09;2!UBERON:0004905;1.20e-08;8!UBERON:0000982;1.20e-08;8!UBERON:0004770;1.20e-08;8!UBERON:0011135;4.63e-08;5!UBERON:0002216;4.63e-08;5!UBERON:0011134;4.63e-08;5!UBERON:0002209;4.63e-08;5!UBERON:0002213;4.63e-08;5!UBERON:0007844;4.63e-08;5!UBERON:0011138;4.63e-08;5!UBERON:0001130;4.63e-08;5!UBERON:0001066;4.63e-08;5!UBERON:0001468;4.63e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,6.46e-10,4;UBERON:0010133,6.46e-10,4;UBERON:0001905,2.24e-09,2;UBERON:0002757,2.24e-09,2;UBERON:0010134,2.24e-09,2;UBERON:0005408,2.24e-09,2;UBERON:0001899,2.24e-09,2;UBERON:0004905,7.78e-09,8;UBERON:0000982,7.78e-09,8;UBERON:0004770,7.78e-09,8;UBERON:0011135,2.95e-08,5;UBERON:0002216,2.95e-08,5;UBERON:0011134,2.95e-08,5;UBERON:0002209,2.95e-08,5;UBERON:0002213,2.95e-08,5;UBERON:0005856,2.95e-08,5;UBERON:0005866,2.95e-08,5;UBERON:0005863,2.95e-08,5;UBERON:0007844,2.95e-08,5;UBERON:0011138,2.95e-08,5;UBERON:0001130,2.95e-08,5;UBERON:0001066,2.95e-08,5;UBERON:0001468,2.95e-08,5;UBERON:0002242,9.24e-07,3;UBERON:0003068,9.24e-07,3;UBERON:0002328,9.24e-07,3;UBERON:0004880,9.24e-07,3 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0.631719873426831,1.30592814099919,0,0,0.436882744260345,0,1.23766352960047,0.662794751455832,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0.940364164434263,0.572471974262113,0.410623275218653,0.251085279189606,0,0.0821005894499457,0.314843125254717,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,1.00267582127178,0.869079113764942,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,1.19257444420023,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.626984899610432,0.775250277507987,0.71153252537342,0,0,0,1.46437234528902,0,0,0.17859945656816,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.529636723252875,0,1.06400514659507,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0.245668634623536,0.723280468230358,1.18800285728205,0.741800787835671,0.910161361938026,0,0.505008341862199,0.375355559615893,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0.358779271377724,0.640672166455702,0,0.300091096084402,0.412210116953756,0.257640540045629,0.930584281657949,1.18143432568886,0,0.504867548488229,0.460249493211497,0.161646056818812,0.710019185033229,0.403008392910561,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0.219500570817251,0,0,0.740707561268237,0,0,0,1.15930404975077,0.70445216541493,0.433099343283221,0,1.33177906564219,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0,0.253991577168676,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.22001485746285,0.387815147273333,0,0,0,0,0,1.41849132023278,0.266422179016099,1.00084595560703,2.71310802695722,0,0,0.710783897485092,0,0.301439377059586,0,0.699810938274399,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,2.57652132610194,1.50051156317903,0.271265023699736,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0.368738337083406,0.60818530127658,0.783204629850962,0.686286847621712,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,1.53461973288062,1.12264037773229,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.164254312027618,1.03850885836724,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.73886140225013,0,0,0.215915916102139,0,0.541892875087706,1.50506932156456,0,0,0.447749509444357,0,0,0,1.31205858279882,0.976135183992909,0.515205058238611,0,0,0,0,1.6068392984416,0.48335359146061,0.154048617114644,0,0,0.107420244868274,0.435050081742686,0.255679882248303,0.623224249527161,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0.42793898803392,2.22742273548156,0,0,0,0.471249609382746,1.2130948894399,0,0,0,0,1.05650146756755,0.136499911407986,0.848432591722276,2.26016233240486,0.551365343546124,0.66343897524122,0,0,1.31178950409327,0,0,0,0.860468113224309,0.294747123039363,0.7133421029625,0,2.9555068941673,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.879049075631364,0.606802608747567,0,0,0.47748896947538,0.593929361665277,0,0,0.844016498463076,1.00177834520615,0,0.211125408127993,0.796991953004279,0.276283915531148,0,0,0,0.933118762985422,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.774054819518572,0.591095237907095,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0.67401132980677,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0.30607276163049,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0.693373365065693,0.347119476670262,0,0,0.17472666824203,0.51595809741485,0,0,0,0.193978032976839,0,0.451961481561065,0,0.19871461170299,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,1.22313785466253,1.67364554099733,0,0.577901179803038,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0.68748127203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| |||
|short_description=p2@PCDHGB7 | |||
}} |
Revision as of 07:54, 22 January 2014
Short description: | p2@PCDHGB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDHGB7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_032101_5end |
EntrezGene: | PCDHGB7 |
HGNC: | 8714 |
UniProt: | Q9Y5F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 9.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 6.46e-10 | 4 |
neuroendocrine gland | 6.46e-10 | 4 |
pineal body | 2.24e-09 | 2 |
regional part of epithalamus | 2.24e-09 | 2 |
secretory circumventricular organ | 2.24e-09 | 2 |
circumventricular organ | 2.24e-09 | 2 |
epithalamus | 2.24e-09 | 2 |
articulation | 7.78e-09 | 8 |
skeletal joint | 7.78e-09 | 8 |
articular system | 7.78e-09 | 8 |
intervertebral cartilage | 2.95e-08 | 5 |
symphysis | 2.95e-08 | 5 |
nonsynovial joint | 2.95e-08 | 5 |
fibrous joint | 2.95e-08 | 5 |
cartilaginous joint | 2.95e-08 | 5 |
developing mesenchymal condensation | 2.95e-08 | 5 |
pre-cartilage condensation | 2.95e-08 | 5 |
cartilaginous condensation | 2.95e-08 | 5 |
cartilage element | 2.95e-08 | 5 |
post-cranial axial skeletal system | 2.95e-08 | 5 |
vertebral column | 2.95e-08 | 5 |
intervertebral disk | 2.95e-08 | 5 |
intervertebral joint | 2.95e-08 | 5 |
nucleus pulposus | 9.24e-07 | 3 |
axial mesoderm | 9.24e-07 | 3 |
notochord | 9.24e-07 | 3 |
chordamesoderm | 9.24e-07 | 3 |