FFCP PHASE1:Hg19::chr7:78119298..78119357,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18957 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000519748,ENST00000520379,uc010ldx.1,uc010ldy.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_MAGI2_5end | |||
|id=chr7:78119298..78119357,- | |||
|ontology_enrichment_celltype=CL:0000047!1.55e-09!8;CL:0000540!3.05e-07!6;CL:0000031!3.05e-07!6;CL:0000404!3.05e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.99e-07;6!CL:0000404;1.99e-07;6!CL:0002334;9.65e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-10,8;CL:0000540,2.25e-07,6;CL:0000031,2.25e-07,6;CL:0000404,2.25e-07,6;CL:0002334,9.05e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.75e-17;82!UBERON:0006241;1.75e-07;3!UBERON:0003057;1.75e-07;3!CL:0000031;1.99e-07;6!UBERON:0006215;2.18e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.44e-65!57;UBERON:0005068!4.44e-65!57;UBERON:0006241!4.44e-65!57;UBERON:0007135!4.44e-65!57;UBERON:0001017!1.72e-63!82;UBERON:0007023!3.19e-62!115;UBERON:0005743!2.76e-61!86;UBERON:0000073!1.02e-56!94;UBERON:0001016!1.02e-56!94;UBERON:0002616!3.91e-54!59;UBERON:0002780!1.87e-50!41;UBERON:0001890!1.87e-50!41;UBERON:0006240!1.87e-50!41;UBERON:0003080!6.80e-49!42;UBERON:0000955!1.11e-48!69;UBERON:0006238!1.11e-48!69;UBERON:0003075!1.68e-44!86;UBERON:0007284!1.68e-44!86;UBERON:0002346!6.09e-43!90;UBERON:0001893!2.29e-42!34;UBERON:0002020!2.51e-42!34;UBERON:0003528!2.51e-42!34;UBERON:0002791!4.05e-41!33;UBERON:0001869!7.50e-40!32;UBERON:0000956!1.34e-30!25;UBERON:0000203!1.34e-30!25;UBERON:0003056!1.71e-30!61;UBERON:0004121!4.09e-28!169;UBERON:0000924!1.00e-27!173;UBERON:0006601!1.00e-27!173;UBERON:0002619!1.90e-27!22;UBERON:0001950!1.14e-24!20;UBERON:0000033!1.13e-23!123;UBERON:0000153!1.43e-23!129;UBERON:0007811!1.43e-23!129;UBERON:0003076!1.38e-16!15;UBERON:0003057!1.38e-16!15;UBERON:0000475!3.73e-15!365;UBERON:0004732!8.95e-14!13;UBERON:0002420!3.52e-13!9;UBERON:0007245!3.52e-13!9;UBERON:0010009!3.52e-13!9;UBERON:0010011!3.52e-13!9;UBERON:0000454!3.52e-13!9;UBERON:0000025!4.30e-13!194;UBERON:0002308!4.89e-13!9;UBERON:0000125!4.89e-13!9;UBERON:0004733!8.33e-13!12;UBERON:0002028!8.33e-13!12;UBERON:0007277!8.33e-13!12;UBERON:0009663!1.35e-10!7;UBERON:0004111!1.78e-10!241;UBERON:0000468!1.55e-09!659;UBERON:0001894!2.57e-09!7;UBERON:0006222!2.57e-09!7;UBERON:0002680!3.75e-09!9;UBERON:0001895!3.75e-09!9;UBERON:0010092!3.75e-09!9;UBERON:0000200!4.57e-09!6;UBERON:0001871!6.96e-09!7;UBERON:0002298!1.34e-08!8;UBERON:0000349!2.81e-08!5;UBERON:0002021!6.93e-08!5;UBERON:0000064!8.44e-08!219;UBERON:0000483!1.17e-07!309;UBERON:0001872!1.26e-07!5;UBERON:0003688!1.38e-07!6;UBERON:0002358!1.38e-07!6;UBERON:0003684!1.38e-07!6;UBERON:0001178!1.38e-07!6;UBERON:0000062!1.62e-07!511;UBERON:0000477!1.75e-07!286;UBERON:0000119!2.14e-07!312;UBERON:0000467!2.20e-07!625;UBERON:0000480!2.58e-07!626;UBERON:0000369!7.92e-07!4;UBERON:0002435!7.92e-07!4;UBERON:0000204!7.92e-07!4;UBERON:0010082!7.92e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.68e-55;34!UBERON:0003528;3.46e-54;34!UBERON:0002020;3.46e-54;34!UBERON:0002780;4.76e-54;41!UBERON:0001890;4.76e-54;41!UBERON:0001869;5.64e-54;32!UBERON:0002791;6.02e-54;32!UBERON:0000073;4.31e-52;53!UBERON:0002616;4.31e-52;53!UBERON:0000956;8.82e-46;25!UBERON:0000203;8.82e-46;25!UBERON:0002619;5.62e-41;22!UBERON:0001950;9.32e-37;20!UBERON:0000955;4.76e-34;68!UBERON:0001017;6.85e-33;75!UBERON:0001016;9.25e-29;83!UBERON:0002420;3.97e-19;9!UBERON:0007245;3.97e-19;9!UBERON:0010009;3.97e-19;9!UBERON:0010011;3.97e-19;9!UBERON:0000454;3.97e-19;9!UBERON:0000125;6.74e-19;9!UBERON:0002308;6.74e-19;9!UBERON:0004732;2.28e-17;13!UBERON:0004733;5.94e-16;12!UBERON:0002028;5.94e-16;12!UBERON:0007023;2.18e-15;114!UBERON:0009663;3.16e-15;7!UBERON:0001894;2.25e-13;7!UBERON:0000200;7.54e-13;6!UBERON:0002298;1.12e-12;6!UBERON:0000349;1.11e-11;5!UBERON:0002021;4.18e-11;5!UBERON:0001871;6.19e-11;6!UBERON:0001872;1.06e-10;5!UBERON:0003688;1.06e-10;6!UBERON:0002358;1.06e-10;6!UBERON:0003684;1.06e-10;6!UBERON:0001178;1.06e-10;6!UBERON:0002680;1.27e-10;9!UBERON:0001895;1.27e-10;9!UBERON:0011216;7.29e-10;132!UBERON:0000369;1.62e-09;4!UBERON:0002435;1.62e-09;4!UBERON:0000204;1.62e-09;4!UBERON:0002784;2.00e-08;4!UBERON:0010314;6.96e-08;132!UBERON:0005383;1.33e-07;3!UBERON:0005382;1.33e-07;3!UBERON:0002240;1.75e-07;3!UBERON:0005174;1.75e-07;3!UBERON:0001137;1.75e-07;3!UBERON:0003296;1.97e-07;4!UBERON:0010133;1.97e-07;4!UBERON:0001896;2.72e-07;3!UBERON:0005290;2.72e-07;3!UBERON:0001870;3.55e-07;3!UBERON:0000988;4.88e-07;3!UBERON:0004457;6.93e-07;9!UBERON:0000042;6.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.62e-97,56;UBERON:0005068,1.62e-97,56;UBERON:0006241,1.62e-97,56;UBERON:0007135,1.62e-97,56;UBERON:0001017,2.69e-95,81;UBERON:0000073,3.08e-91,53;UBERON:0002616,3.08e-91,53;UBERON:0001016,8.99e-87,89;UBERON:0002780,5.85e-76,41;UBERON:0001890,5.85e-76,41;UBERON:0003080,5.85e-76,41;UBERON:0006240,5.85e-76,41;UBERON:0000955,1.94e-75,68;UBERON:0006238,1.94e-75,68;UBERON:0003075,6.77e-69,82;UBERON:0007284,6.77e-69,82;UBERON:0002346,6.50e-65,86;UBERON:0001893,1.13e-63,34;UBERON:0003528,1.30e-63,34;UBERON:0002020,1.30e-63,34;UBERON:0001869,7.50e-60,32;UBERON:0002791,9.54e-60,32;UBERON:0007023,2.45e-54,114;UBERON:0010371,9.02e-51,104;UBERON:0003056,1.56e-49,61;UBERON:0000956,8.44e-46,25;UBERON:0000203,8.44e-46,25;UBERON:0010314,6.96e-43,132;UBERON:0002619,5.11e-41,22;UBERON:0004121,1.25e-40,171;UBERON:0000924,1.25e-40,171;UBERON:0006601,1.25e-40,171;UBERON:0001950,8.48e-37,20;UBERON:0011216,8.11e-28,223;UBERON:0003076,1.33e-21,15;UBERON:0003057,1.33e-21,15;UBERON:0000025,7.49e-21,192;UBERON:0002420,4.19e-19,9;UBERON:0007245,4.19e-19,9;UBERON:0010009,4.19e-19,9;UBERON:0010011,4.19e-19,9;UBERON:0000454,4.19e-19,9;UBERON:0000125,6.89e-19,9;UBERON:0002308,6.89e-19,9;UBERON:0004732,1.90e-17,13;UBERON:0004733,5.40e-16,12;UBERON:0002028,5.40e-16,12;UBERON:0007277,5.40e-16,12;UBERON:0009663,3.37e-15,7;UBERON:0004111,2.97e-14,240;UBERON:0001894,2.87e-13,7;UBERON:0006222,2.87e-13,7;UBERON:0000200,6.82e-13,6;UBERON:0002298,1.02e-12,6;UBERON:0000349,1.05e-11,5;UBERON:0002021,4.10e-11,5;UBERON:0001871,5.99e-11,6;UBERON:0001872,1.01e-10,5;UBERON:0003688,1.15e-10,6;UBERON:0002358,1.15e-10,6;UBERON:0003684,1.15e-10,6;UBERON:0001178,1.15e-10,6;UBERON:0002680,1.21e-10,9;UBERON:0001895,1.21e-10,9;UBERON:0010092,1.21e-10,9;UBERON:0000483,1.24e-10,306;UBERON:0000119,2.24e-10,309;UBERON:0000369,1.60e-09,4;UBERON:0002435,1.60e-09,4;UBERON:0000204,1.60e-09,4;UBERON:0010082,1.60e-09,4;UBERON:0002050,4.73e-09,564;UBERON:0000923,9.66e-09,560;UBERON:0010316,9.66e-09,560;UBERON:0005291,9.66e-09,560;UBERON:0006598,9.66e-09,560;UBERON:0010317,9.66e-09,560;UBERON:0002532,9.66e-09,560;UBERON:0000922,1.61e-08,592;UBERON:0002784,2.34e-08,4;UBERON:0005423,3.90e-08,581;UBERON:0005383,1.37e-07,3;UBERON:0005382,1.37e-07,3;UBERON:0002240,1.81e-07,3;UBERON:0005174,1.81e-07,3;UBERON:0001137,1.81e-07,3;UBERON:0003296,2.37e-07,4;UBERON:0010133,2.37e-07,4;UBERON:0001896,2.58e-07,3;UBERON:0005290,2.58e-07,3;UBERON:0010096,2.58e-07,3;UBERON:0001870,3.52e-07,3;UBERON:0000988,4.69e-07,3 | |||
|phase1_expression=5.4503513781167,4.28201047781966,7.18867460889453,6.00439790118782,2.23480547213644,4.36169262050184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,1.56727360739044,14.3117993565528,3.42186062682211,2.38531015230125,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91171533116422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0,1.28820270022815,0,0.843881661206331,0.974370051611986,0.252433774244115,0.276149695926898,0.323292113637624,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,15.2456774533478,9.10978977003352,5.41302168944387,3.51784157202132,3.18969375826582,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46594054073798,18.1085128479914,3.92924132206303,1.79394808957981,5.62877973973374,2.0911009748669,2.96836132889982,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,16.9005100120271,28.2745526985131,0,0,0,2.78947183551498,0.552567831062295,0,0,0,0,0,0,0,0.789147245095469,0,0,13.5706584453331,12.8019975463355,1.99613798001194,0,0,0,0,0,0,0,0,0,35.4296554325536,23.2751126547037,18.30980835805,40.1402713550345,11.5263571391884,7.89787429754301,0,0,2.5393585306253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,20.2203398942031,1.60515529459758,18.0383623208511,0,0,0,0.789168805698781,0,6.42752799424029,5.81316532582089,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,15.5744558051462,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,25.2176521258112,23.1370090327468,0,0,0,1.95497680890578,1.83328339209347,0,0,0,0,0.940568614814168,0.360299883542404,0,0,0,0,0,0,29.4234985229442,41.5420388640306,0.964518890790115,1.51293380256957,2.07720169014593,0,0,18.2248669974074,0,0.0788057072991982,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,17.3239161524478,15.8679122091228,0,0,0.640724475406168,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,11.5188863395708,18.4259660001964,23.9114677649415,18.3490942620823,14.4207766997908,20.3676201647738,0,0,0,0,0,0,0,0,0,0,1.13641803165053,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9187094542494,0,0,0,0,0,0,0,0,6.71638420677181,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,18.3695583775874,34.0071783181404,23.9450788585727,20.101403695594,5.29350562065608,15.9753253192343,14.048381169971,2.85538840518309,0,0,0,0,0.762764190934334,0,0.198916222116275,2.18109952212846,0,0,0,0,0,15.2634941237572,9.37293718336617,26.8692835451539,17.2491003727427,8.20462213527329,0,2.48105589194647,0.175871244359621,0,1.07140367175657,2.35398605553177,3.03482802118316,4.55324382702595,0.0887023701626388,0,0,10.7392178103394,14.6015557309525,0,0,2.59027206406696,16.0257901714322,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,1.71603825227734,0,26.1090261262877,26.4371296291107,12.2570160999186,0.339854229375634,0,0.128915775947154,0,0,0,0,0,0.458729283404541,11.0371479026618,0,15.0941108223831,5.67255897442491,1.0580536810308,0,0,0.432626562123789,0,1.42045243552804,0,0,0,0,0,0.454672189309436,0.535928260312357,25.7042526232222,30.2024347916734,0.426467963801962,1.90451545170992,0,0,0,1.78212043178862,3.43599221228973,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,2.44482888365733,4.47585796147312,0,0.402547587182052,0 | |||
|short_description=p3@MAGI2 | |||
}} |
Revision as of 17:32, 22 January 2014
Short description: | p3@MAGI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAGI2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000519748, ENST00000520379, uc010ldx.1, uc010ldy.1_5end |
EntrezGene: | MAGI2 |
HGNC: | 18957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-10 | 8 |
neuron | 2.25e-07 | 6 |
neuroblast | 2.25e-07 | 6 |
electrically signaling cell | 2.25e-07 | 6 |
preadipocyte | 9.05e-07 | 12 |