FFCP PHASE1:Hg19::chrX:107681633..107681692,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1288 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2208 | |||
|TSSclassifier=strong | |||
|UniProt=A8MXH5,F5H0Z6,Q14031 | |||
|association_with_transcript=0bp_to_ENST00000334504,ENST00000394872,ENST00000461897,ENST00000541389,NM_033641,uc004env.3,uc004enx.2,uc010npk.2,uc011msn.1_5end | |||
|description=CAGE_peak_1_at_COL4A6_5end | |||
|id=chrX:107681633..107681692,- | |||
|ontology_enrichment_celltype=CL:0000066!4.46e-17!254;CL:0002321!3.08e-16!248;CL:0000220!1.78e-15!246;CL:0000192!1.07e-09!42;CL:0000514!1.07e-09!42;CL:0000393!2.67e-08!60;CL:0000211!2.67e-08!60;CL:0002076!3.39e-08!43;CL:0000183!1.04e-07!59;CL:0000223!6.68e-07!59;CL:0000076!9.50e-07!62;CL:0000359!9.88e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.03e-07;43!CL:0002076;2.11e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.76e-17,253;CL:0002321,2.39e-15,250;CL:0000192,6.15e-10,43;CL:0000514,6.15e-10,43;CL:0002076,1.05e-08,42;CL:0000393,2.34e-07,61;CL:0000211,2.34e-07,61;CL:0000223,4.09e-07,58;CL:0000076,5.29e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;1.03e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.23e-24!347;UBERON:0000119!2.28e-22!312;UBERON:0000922!3.11e-22!612;UBERON:0000483!1.00e-21!309;UBERON:0000477!2.81e-20!286;UBERON:0002050!6.96e-19!605;UBERON:0005423!6.96e-19!605;UBERON:0000468!1.40e-18!659;UBERON:0000923!2.11e-18!604;UBERON:0005291!2.11e-18!604;UBERON:0006598!2.11e-18!604;UBERON:0002532!2.11e-18!604;UBERON:0004111!8.23e-17!241;UBERON:0000480!9.20e-17!626;UBERON:0000467!1.03e-16!625;UBERON:0004119!9.98e-16!169;UBERON:0000925!9.98e-16!169;UBERON:0006595!9.98e-16!169;UBERON:0003104!4.69e-13!238;UBERON:0009142!4.69e-13!238;UBERON:0000475!5.35e-13!365;UBERON:0000064!8.68e-13!219;UBERON:0001007!5.06e-11!155;UBERON:0001555!5.06e-11!155;UBERON:0007026!5.06e-11!155;UBERON:0000025!5.10e-11!194;UBERON:0004121!4.52e-10!169;UBERON:0000062!8.79e-10!511;UBERON:0002049!1.23e-09!79;UBERON:0007798!1.23e-09!79;UBERON:0001004!1.61e-09!72;UBERON:0003914!2.26e-09!118;UBERON:0005256!2.43e-09!143;UBERON:0000924!4.89e-09!173;UBERON:0006601!4.89e-09!173;UBERON:0004921!5.35e-09!129;UBERON:0004185!5.35e-09!129;UBERON:0000490!5.76e-09!138;UBERON:0001048!5.87e-09!168;UBERON:0000033!2.55e-08!123;UBERON:0001981!3.48e-08!60;UBERON:0007500!3.48e-08!60;UBERON:0004537!3.48e-08!60;UBERON:0006965!3.48e-08!60;UBERON:0000153!4.65e-08!129;UBERON:0007811!4.65e-08!129;UBERON:0004872!8.94e-08!84;UBERON:0000486!1.26e-07!82;UBERON:0001008!1.29e-07!45;UBERON:0006554!1.86e-07!44;UBERON:0000161!1.87e-07!35;UBERON:0001444!2.33e-07!48;UBERON:0002100!2.64e-07!216;UBERON:0000466!4.22e-07!126;UBERON:0000077!4.33e-07!130;UBERON:0001637!4.82e-07!42;UBERON:0003509!4.82e-07!42;UBERON:0004572!4.82e-07!42;UBERON:0003103!5.08e-07!69;UBERON:0000055!5.85e-07!69;UBERON:0005156!6.88e-07!59;UBERON:0000990!6.88e-07!59;UBERON:0002530!8.30e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.01e-19,592;UBERON:0004119,9.14e-19,160;UBERON:0000925,9.14e-19,160;UBERON:0006595,9.14e-19,160;UBERON:0005423,7.85e-17,581;UBERON:0000119,9.54e-15,309;UBERON:0002050,1.40e-14,564;UBERON:0000483,3.48e-14,306;UBERON:0000923,2.58e-13,560;UBERON:0010316,2.58e-13,560;UBERON:0005291,2.58e-13,560;UBERON:0006598,2.58e-13,560;UBERON:0010317,2.58e-13,560;UBERON:0002532,2.58e-13,560;UBERON:0001007,5.73e-13,145;UBERON:0001555,5.73e-13,145;UBERON:0007026,5.73e-13,145;UBERON:0004921,5.95e-11,118;UBERON:0004111,1.56e-10,240;UBERON:0001048,8.73e-10,160;UBERON:0001004,1.23e-09,74;UBERON:0001008,2.58e-09,48;UBERON:0006554,3.91e-09,47;UBERON:0000033,5.49e-09,56;UBERON:0002049,6.70e-09,78;UBERON:0007798,6.70e-09,78;UBERON:0003914,8.15e-09,117;UBERON:0000153,3.15e-08,62;UBERON:0007811,3.15e-08,62;UBERON:0003104,4.82e-08,160;UBERON:0009142,4.82e-08,160;UBERON:0001444,5.13e-08,49;UBERON:0000161,1.11e-07,36;UBERON:0007500,1.64e-07,59;UBERON:0001981,1.64e-07,59;UBERON:0004537,1.64e-07,59;UBERON:0006965,1.64e-07,59;UBERON:0011216,1.80e-07,223;UBERON:0000490,1.97e-07,148;UBERON:0005256,3.53e-07,122;UBERON:0005156,5.71e-07,59;UBERON:0000990,5.71e-07,59;UBERON:0004872,6.12e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,17.6928434281086,6.97801167972428,62.6926738013594,59.875104057859,1.8564952944007,3.64537113300707,2.6893005858071,0,1.46062018077475,0.975865597581014,5.17108443922509,6.32402142857184,3.13454721478088,38.0693862884305,20.5311637609326,30.0046908631579,1.52826811495903,1.23150884174919,1.10195093839151,0,0,0.309632246632152,7.35536979583142,18.072355126695,16.6389304575054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,5.0103453096956,3.99112915432615,3.51339142772504,6.02503747289478,30.236508928281,22.9886354526346,0,0,0,0,0,0,0,1.72046919021225,1.38856200643038,2.26123176769604,6.29249154314859,1.37559020970034,3.34391946458897,0.516833518338658,0,0,3.22263453687318,3.80136052859256,1.22031028774085,0.735326160691737,3.24056779152704,1.87529429396568,1.79623498100936,1.35133776579987,0,2.84779697870439,1.64881569537367,0,0,40.5567468492557,0,2.27934920996244,3.31022952033047,12.9076479336966,6.73869926176878,3.92474320099615,0,1.48000529050296,4.04574346019696,3.50247747381189,10.9519475086017,16.4979596132975,17.2852777344,7.49828581868149,0.624320153660641,0,1.94283284717341,2.23125547423153,1.45685649931318,1.40450806702248,3.47062091133319,2.08818339430006,3.82305390350332,0,0,7.28129089550421,5.03032699271367,2.86171393721913,2.00189631795143,2.21651292387346,0,0,0,1.92834711372036,0,0,0,0,0,0,0.744467425326359,0,0,0,0,0.161646056818812,0.355009592516614,0,0.169560592310488,10.6293469239813,12.5463215471784,9.75135624322613,20.8575037481608,23.7228285295459,31.4885585176395,46.0255084268245,29.0168978506973,29.9281434442181,0,1.28648187638577,0,0,1.44375896333917,2.9576700009961,3.70886318171824,3.37415441836875,2.97793726377464,2.83243277320128,4.74541238222193,3.10112008768378,2.74710051175484,3.8474715694639,0.738155454624648,2.80483547606892,11.1124983059478,7.3504355692771,0,0,0,0,2.21379189377604,3.77449182656756,17.4502953799715,22.4803506515239,10.8571290204561,29.0727717797783,9.12263254868909,9.35941306751621,5.77325368101093,16.8099087213861,4.10930429825376,0,0.462985512576611,0,0,0,0,0,0,14.0600750980165,2.68771405118175,7.79763034833126,30.2707806735627,34.5854386831615,12.2682457332868,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,5.27016096423195,3.48768055066624,2.27348686044945,0.129271715757778,0,0,0.531876233169741,0,0,0,0,81.0685224041697,29.3015666911379,9.05564370458846,0,85.6494596469535,10.2953743481346,22.9093926565285,32.2467379682109,64.0826873476986,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,15.4997720775703,10.4111883086097,3.86644406388848,5.69555302136786,4.46557126157214,0,0,0,1.8403723757871,0.500170521059677,0.271265023699736,0.415941723061614,3.92543775353756,4.73107245101804,0.468565659970853,0,0,1.03473071292505,0,0,0.434418072340414,6.65723935373318,3.77457766191941,0,0,0,8.48757200049526,9.98612637062982,28.1222972796603,0,0,0,0,0,0,0,0,0,0.0821271560138091,13.5006151587741,0,1.69203229428271,11.8298817478938,10.8655566944358,10.21848588665,1.27463817604702,3.01586154406675,2.70719767744447,1.00119938235739,3.13739907670742,4.38417673959782,1.16106791782163,1.13733384070897,3.40187410553031,0.647747748306418,0,8.67028600140329,4.01351819083883,3.3133915495855,3.3243040357149,1.79099803777743,0,0,3.33385162651306,2.29610251989794,1.30151357865721,0.9273691048295,0,0,12.0595762979196,22.7521086112782,0,0.386682873168488,0.462145851343933,0.15350367472613,0,1.6113036730241,0.290033387828457,0.596586391912706,0,28.7595752728102,24.2159484880034,81.6721359965338,16.4887182794546,0.464845549297286,22.3516766249754,12.5466708628908,2.46426864140871,3.72614221221915,10.4391959049009,11.1194531462352,6.5837447901316,1.116475108079,11.0732798651554,5.71890581771475,2.303080121802,5.56320684444097,1.90921948755562,4.70969184119538,6.83515338816596,13.1777774273306,15.3156123049392,5.0545620393329,7.92551605865041,0.421258456238981,7.31450608634386,29.4893322453854,38.034052832432,4.7774968992795,28.4224918226963,1.13008116620243,0,25.8741200344076,16.661133639643,6.94530641120025,7.87073702455959,6.89895281673194,1.239293992399,2.81695602532241,4.7325746227337,6.28793862483975,5.35006577221875,2.48332744849418,0.211107635297664,0,13.6610342555657,5.94889024416471,17.8010908542197,11.3951386841084,16.3336477291984,0.376575203107117,58.9792360559585,65.703875510374,68.288243644648,71.2142540641574,0,0,0,0,0,0,0,0,0.106824071127473,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.445773537109913,0,14.8021580537368,4.45447021248958,8.29333895667927,0,0.281338832821026,2.78271762557265,0,9.07839254950372,6.17668763578316,0.552567831062295,0,26.4875887680581,0,0.311039587661807,0,0,0,20.1232547499345,0,2.22273980289274,0.969332746095218,0.371072392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| |||
|short_description=p1@COL4A6 | |||
}} |
Revision as of 06:33, 23 January 2014
Short description: | p1@COL4A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL4A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334504, ENST00000394872, ENST00000461897, ENST00000541389, NM_033641, uc004env.3, uc004enx.2, uc010npk.2, uc011msn.1_5end |
EntrezGene: | COL4A6 |
HGNC: | 2208 |
UniProt: | A8MXH5F5H0Z6Q14031 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.76e-17 | 253 |
embryonic cell | 2.39e-15 | 250 |
smooth muscle cell | 6.15e-10 | 43 |
smooth muscle myoblast | 6.15e-10 | 43 |
endo-epithelial cell | 1.05e-08 | 42 |
electrically responsive cell | 2.34e-07 | 61 |
electrically active cell | 2.34e-07 | 61 |
endodermal cell | 4.09e-07 | 58 |
squamous epithelial cell | 5.29e-07 | 63 |