UBERON:0003672: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=In FMA this is an anatomical set | |comment=In FMA this is an anatomical set | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003672 | |||
|is_a=UBERON:0000477 ;;UBERON:0010314 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of=UBERON: | |name=dentition | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0010323 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Dentition refers to set of teeth, especially with regard to their number, kind, and arrangement, in the mouth.[AAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Dentition refers to set of teeth, especially with regard to their number, kind, and arrangement, in the mouth.[AAO]" xsd:string | ||
| | |subset= | ||
| | |synonym="dentes" EXACT [FMA:75150, FMA:TA];;"set of teeth" EXACT [FMA:75150];;"teeth" EXACT [FMA:75150];;"teeth" RELATED [];;"teeth set" EXACT [FMA:75150] | ||
|union_of= | |||
|xref=AAO:0000126;;FMA:75150;;GAID:1249;;MESH:A.14.254;;ncithesaurus:Dentition;;OpenCyc:Mx4rvVi65JwpEbGdrcN5Y29ycA;;SCTID:245543004 | |||
}} | }} |
Latest revision as of 17:41, 12 September 2014
Name: | dentition | |
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Namespace: | FANTOM | |
Xrefs: |
| |
Synonyms: |
"dentes" EXACT [FMA:75150, FMA:TA] "set of teeth" EXACT [FMA:75150] "teeth" EXACT [FMA:75150] "teeth" RELATED [] "teeth set" EXACT [FMA:75150] | |
Comments: | In FMA this is an anatomical set |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000477(anatomical cluster),UBERON:0010314(structure with developmental contribution from neural crest) |
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part_of: | UBERON:0010323(cranial skeletal system) |
Children
part of: | UBERON:0001758 (periodontium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003672 (dentition), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Dentition refers to set of teeth, especially with regard to their number, kind, and arrangement, in the mouth.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.