FFCP PHASE1:Hg19::chr10:11374840..11374854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:11374840..11374854,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr10:11374840..11374854,+ | |description=CAGE_peak_at_chr10:11374840..11374854,+ | ||
|id=chr10:11374840..11374854,+ | |id=chr10:11374840..11374854,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.17e-20!172;CL:0000566!1.17e-20!172;CL:0002032!1.95e-19!165;CL:0000837!1.95e-19!165;CL:0000988!5.01e-19!182;CL:0000738!1.02e-17!140;CL:0002087!3.65e-15!119;CL:0002031!4.29e-14!124;CL:0000763!2.35e-13!112;CL:0000049!2.35e-13!112;CL:0000766!7.76e-10!76;CL:0002057!8.14e-10!42;CL:0000557!2.16e-09!71;CL:0002009!4.25e-09!65;CL:0002194!2.01e-08!63;CL:0000576!2.01e-08!63;CL:0000040!2.01e-08!63;CL:0000559!2.01e-08!63;CL:0000839!2.20e-08!70;CL:0000860!2.37e-08!45 | |ontology_enrichment_celltype=CL:0000037!1.17e-20!172;CL:0000566!1.17e-20!172;CL:0002032!1.95e-19!165;CL:0000837!1.95e-19!165;CL:0000988!5.01e-19!182;CL:0000738!1.02e-17!140;CL:0002087!3.65e-15!119;CL:0002031!4.29e-14!124;CL:0000763!2.35e-13!112;CL:0000049!2.35e-13!112;CL:0000766!7.76e-10!76;CL:0002057!8.14e-10!42;CL:0000557!2.16e-09!71;CL:0002009!4.25e-09!65;CL:0002194!2.01e-08!63;CL:0000576!2.01e-08!63;CL:0000040!2.01e-08!63;CL:0000559!2.01e-08!63;CL:0000839!2.20e-08!70;CL:0000860!2.37e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.23e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.99e-12,3;CL:0000037,3.45e-07,168;CL:0002032,5.62e-07,161;CL:0000837,5.62e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.79e-07!51;DOID:0060083!2.79e-07!51;DOID:1240!3.58e-07!39 | |ontology_enrichment_disease=DOID:2531!2.79e-07!51;DOID:0060083!2.79e-07!51;DOID:1240!3.58e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.01e-12!102;UBERON:0003061!6.01e-12!102;UBERON:0001869!1.82e-11!32;UBERON:0002619!2.10e-11!22;UBERON:0002020!2.42e-11!34;UBERON:0003528!2.42e-11!34;UBERON:0007023!4.35e-11!115;UBERON:0001893!4.37e-11!34;UBERON:0002193!6.32e-11!112;UBERON:0000956!1.11e-10!25;UBERON:0000203!1.11e-10!25;UBERON:0002791!1.34e-10!33;UBERON:0001049!1.56e-10!57;UBERON:0005068!1.56e-10!57;UBERON:0006241!1.56e-10!57;UBERON:0007135!1.56e-10!57;UBERON:0001950!4.47e-10!20;UBERON:0002780!5.98e-10!41;UBERON:0001890!5.98e-10!41;UBERON:0006240!5.98e-10!41;UBERON:0003080!1.99e-09!42;UBERON:0001017!2.96e-09!82;UBERON:0005743!5.04e-09!86;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0002616!3.14e-08!59;UBERON:0002371!9.14e-08!80;UBERON:0002346!1.64e-07!90;UBERON:0000073!7.07e-07!94;UBERON:0001016!7.07e-07!94;UBERON:0000955!7.90e-07!69;UBERON:0006238!7.90e-07!69 | |ontology_enrichment_uberon=UBERON:0002390!6.01e-12!102;UBERON:0003061!6.01e-12!102;UBERON:0001869!1.82e-11!32;UBERON:0002619!2.10e-11!22;UBERON:0002020!2.42e-11!34;UBERON:0003528!2.42e-11!34;UBERON:0007023!4.35e-11!115;UBERON:0001893!4.37e-11!34;UBERON:0002193!6.32e-11!112;UBERON:0000956!1.11e-10!25;UBERON:0000203!1.11e-10!25;UBERON:0002791!1.34e-10!33;UBERON:0001049!1.56e-10!57;UBERON:0005068!1.56e-10!57;UBERON:0006241!1.56e-10!57;UBERON:0007135!1.56e-10!57;UBERON:0001950!4.47e-10!20;UBERON:0002780!5.98e-10!41;UBERON:0001890!5.98e-10!41;UBERON:0006240!5.98e-10!41;UBERON:0003080!1.99e-09!42;UBERON:0001017!2.96e-09!82;UBERON:0005743!5.04e-09!86;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0002616!3.14e-08!59;UBERON:0002371!9.14e-08!80;UBERON:0002346!1.64e-07!90;UBERON:0000073!7.07e-07!94;UBERON:0001016!7.07e-07!94;UBERON:0000955!7.90e-07!69;UBERON:0006238!7.90e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.52e-16;22!UBERON:0000956;6.13e-14;25!UBERON:0000203;6.13e-14;25!UBERON:0002791;2.21e-13;32!UBERON:0001869;7.02e-13;32!UBERON:0001950;5.26e-12;20!UBERON:0003528;1.48e-11;34!UBERON:0002020;1.48e-11;34!UBERON:0001893;4.68e-11;34!UBERON:0002780;1.03e-08;41!UBERON:0001890;1.03e-08;41!UBERON:0001871;3.04e-08;6!UBERON:0002771;4.05e-08;2!UBERON:0001954;1.38e-07;2!UBERON:0003022;1.38e-07;2!UBERON:0002421;1.38e-07;2!UBERON:0002600;1.38e-07;2!UBERON:0002021;8.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.71e-16,22;UBERON:0002791,1.02e-14,32;UBERON:0001869,1.02e-14,32;UBERON:0000956,6.36e-14,25;UBERON:0000203,6.36e-14,25;UBERON:0003528,1.04e-13,34;UBERON:0002020,1.04e-13,34;UBERON:0001893,1.04e-13,34;UBERON:0001950,5.01e-12,20;UBERON:0002780,6.23e-11,41;UBERON:0001890,6.23e-11,41;UBERON:0003080,6.23e-11,41;UBERON:0006240,6.23e-11,41;UBERON:0000073,2.99e-09,53;UBERON:0002616,2.99e-09,53;UBERON:0001049,1.33e-08,56;UBERON:0005068,1.33e-08,56;UBERON:0006241,1.33e-08,56;UBERON:0007135,1.33e-08,56;UBERON:0001871,2.39e-08,6;UBERON:0002771,5.13e-08,2;UBERON:0001017,8.41e-08,81;UBERON:0001954,1.70e-07,2;UBERON:0003022,1.70e-07,2;UBERON:0002421,1.70e-07,2;UBERON:0002600,1.70e-07,2;UBERON:0002021,9.06e-07,5 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0.382067028739756,0.57470412614962,0.629686250509434,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,1.00272223735071,0.651032612147555,0.223915474239924,0.32389366601898,0.515151135268373,1.30858414901608,0.377875943688809,0.727752183563449,0,0.822335776043652,0.619412741790207,0.28769239232215,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0.545812300115692,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,1.9791078011203,1.19678194572979,0,0.870627715885752,0.56738522469114,0.622822248995575,1.7587406567972,1.5644487552606,0,1.81619850790011,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0,0.44931452458598,0.750884464207532,0.32145117339416,0,0.59675003159727,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0.526768169550154,0.196709770113833,2.35806457649499,1.02800749499755,0.501559486172034,0.32592226663359,0,0,0.222820913770347,0,0.664601683750863,0.812411591295047,0.768547918354051,0.910415432919148,0.822189523018381,1.38175008892924,0.869409257205157,0.593146252648242,0.802622484269139,1.04535523804977,0.453237370790265,0,0.34362744548263,1.77113784413652,0,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.604820229674197,0.534880391567015,1.15859523106239,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.196468613246569,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0.528290604079356,0.829312462163088,0.432359860250884,0.12624243342638,0.317489471460845,0.381988425558278,1.17217447210047,0,0.514137463516618,0,2.28661146104463,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,1.50677127429638,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0,0.784596007954691,0.394061520403854,0.646882724578552,0.898401253958239,0.508189248444927,1.30139853857622,1.54657762555539,1.34013012267479,0,6.74106321552464,17.9496875522415,2.48649308061621,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0.82707210449155,0.862856803274467,1.38745825144478,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0,0,0.145016693914229,0.255679882248303,0.356128142586949,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,1.39453664789186,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,3.0585488285695,2.84823593587081,0.952927101831156,0.411362273086194,1.29694662238543,0,4.75875105776562,0,0,0,0.929015875628594,0.432807638929335,0.426851060090485,1.27541018183058,2.19537308576098,0.191505370132367,0.846694330895531,1.62310970137278,2.52717460302113,0.456469358066384,0.626719583092093,0,0.338583555603207,1.1241165257259,1.61439765752838,0,0.687010689511529,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0.33307196799782,0,0,0.879049075631364,0.728163130497081,0.111443384277478,0,0,0,0,0.994147647766298,2.39138007897872,0.111308705022906,0.494411622680279,0,0.398495976502139,0,0,0,0.615424027305347,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0.1137934482855,0,0,0,0,0,0,1.08536794762867,1.52581736317083,0.663475559587348,0.886642856860642,0.438770794307945,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,4.08773192782946,1.2558420511602,0.664846727600626,0,0,0.167821586975843,0,0.476809736941136,0,0,0,0,0,0.265372693510018,0,0,0.741383633679017,0.417687798021821,0,0.802577647298789,0.234264445725339,0.364909578431332,0,0,0,0,1.83643656978294,0.126373159256976,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0.343972064943233,0,0,0,0.19397803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| ||
|short_description=p@chr10:11374840..11374854,+ | |short_description=p@chr10:11374840..11374854,+ | ||
}} | }} |
Latest revision as of 10:29, 23 July 2015
Short description: | p@chr10:11374840..11374854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11374840..11374854, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.99e-12 | 3 |
hematopoietic stem cell | 3.45e-07 | 168 |
hematopoietic oligopotent progenitor cell | 5.62e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.62e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.71e-16 | 22 |
regional part of telencephalon | 1.02e-14 | 32 |
cerebral hemisphere | 1.02e-14 | 32 |
cerebral cortex | 6.36e-14 | 25 |
pallium | 6.36e-14 | 25 |
brain grey matter | 1.04e-13 | 34 |
gray matter | 1.04e-13 | 34 |
telencephalon | 1.04e-13 | 34 |
neocortex | 5.01e-12 | 20 |
regional part of forebrain | 6.23e-11 | 41 |
forebrain | 6.23e-11 | 41 |
anterior neural tube | 6.23e-11 | 41 |
future forebrain | 6.23e-11 | 41 |
regional part of nervous system | 2.99e-09 | 53 |
regional part of brain | 2.99e-09 | 53 |
neural tube | 1.33e-08 | 56 |
neural rod | 1.33e-08 | 56 |
future spinal cord | 1.33e-08 | 56 |
neural keel | 1.33e-08 | 56 |
temporal lobe | 2.39e-08 | 6 |
middle temporal gyrus | 5.13e-08 | 2 |
central nervous system | 8.41e-08 | 81 |
Ammon's horn | 1.70e-07 | 2 |
lobe parts of cerebral cortex | 1.70e-07 | 2 |
hippocampal formation | 1.70e-07 | 2 |
limbic lobe | 1.70e-07 | 2 |
occipital lobe | 9.06e-07 | 5 |