FFCP PHASE1:Hg19::chr10:11374858..11374881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:11374858..11374881,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:11374858..11374881,+ | |description=CAGE_peak_at_chr10:11374858..11374881,+ | ||
|id=chr10:11374858..11374881,+ | |id=chr10:11374858..11374881,+ | ||
|ontology_enrichment_celltype=CL:0002032!4.88e-25!165;CL:0000837!4.88e-25!165;CL:0000037!1.50e-24!172;CL:0000566!1.50e-24!172;CL:0000988!3.29e-23!182;CL:0000763!3.37e-19!112;CL:0000049!3.37e-19!112;CL:0000738!1.86e-18!140;CL:0002087!1.68e-15!119;CL:0002031!9.37e-14!124;CL:0000766!1.83e-12!76;CL:0002057!4.75e-12!42;CL:0000860!2.90e-10!45;CL:0000557!2.38e-09!71;CL:0002194!2.55e-09!63;CL:0000576!2.55e-09!63;CL:0000040!2.55e-09!63;CL:0000559!2.55e-09!63;CL:0000839!3.69e-09!70;CL:0002009!4.09e-09!65 | |ontology_enrichment_celltype=CL:0002032!4.88e-25!165;CL:0000837!4.88e-25!165;CL:0000037!1.50e-24!172;CL:0000566!1.50e-24!172;CL:0000988!3.29e-23!182;CL:0000763!3.37e-19!112;CL:0000049!3.37e-19!112;CL:0000738!1.86e-18!140;CL:0002087!1.68e-15!119;CL:0002031!9.37e-14!124;CL:0000766!1.83e-12!76;CL:0002057!4.75e-12!42;CL:0000860!2.90e-10!45;CL:0000557!2.38e-09!71;CL:0002194!2.55e-09!63;CL:0000576!2.55e-09!63;CL:0000040!2.55e-09!63;CL:0000559!2.55e-09!63;CL:0000839!3.69e-09!70;CL:0002009!4.09e-09!65 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.29e-08;3!CL:0000094;9.13e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.15e-14,168;CL:0002032,3.04e-13,161;CL:0000837,3.04e-13,161;CL:0000988,1.20e-12,177;CL:0000763,4.30e-10,108;CL:0000049,4.30e-10,108;CL:0000738,5.73e-10,136;CL:0000775,1.81e-08,3;CL:0000094,7.13e-08,8;CL:0002087,1.17e-07,115;CL:0000766,4.64e-07,72;CL:0000047,9.01e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!4.64e-10!39;DOID:2531!6.38e-08!51;DOID:0060083!6.38e-08!51;DOID:8692!1.55e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.16e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002020!7.11e-12!34;UBERON:0003528!7.11e-12!34;UBERON:0001869!9.63e-12!32;UBERON:0001893!1.01e-11!34;UBERON:0002791!1.84e-11!33;UBERON:0002780!2.44e-11!41;UBERON:0001890!2.44e-11!41;UBERON:0006240!2.44e-11!41;UBERON:0003080!9.72e-11!42;UBERON:0002390!1.14e-09!102;UBERON:0003061!1.14e-09!102;UBERON:0002193!1.70e-09!112;UBERON:0001049!2.62e-09!57;UBERON:0005068!2.62e-09!57;UBERON:0006241!2.62e-09!57;UBERON:0007135!2.62e-09!57;UBERON:0007023!2.80e-09!115;UBERON:0002619!5.38e-09!22;UBERON:0000956!6.23e-09!25;UBERON:0000203!6.23e-09!25;UBERON:0003075!5.67e-08!86;UBERON:0007284!5.67e-08!86;UBERON:0001950!6.53e-08!20;UBERON:0005743!9.05e-08!86;UBERON:0001017!1.03e-07!82;UBERON:0003056!2.10e-07!61;UBERON:0002346!2.82e-07!90 | |ontology_enrichment_uberon=UBERON:0002020!7.11e-12!34;UBERON:0003528!7.11e-12!34;UBERON:0001869!9.63e-12!32;UBERON:0001893!1.01e-11!34;UBERON:0002791!1.84e-11!33;UBERON:0002780!2.44e-11!41;UBERON:0001890!2.44e-11!41;UBERON:0006240!2.44e-11!41;UBERON:0003080!9.72e-11!42;UBERON:0002390!1.14e-09!102;UBERON:0003061!1.14e-09!102;UBERON:0002193!1.70e-09!112;UBERON:0001049!2.62e-09!57;UBERON:0005068!2.62e-09!57;UBERON:0006241!2.62e-09!57;UBERON:0007135!2.62e-09!57;UBERON:0007023!2.80e-09!115;UBERON:0002619!5.38e-09!22;UBERON:0000956!6.23e-09!25;UBERON:0000203!6.23e-09!25;UBERON:0003075!5.67e-08!86;UBERON:0007284!5.67e-08!86;UBERON:0001950!6.53e-08!20;UBERON:0005743!9.05e-08!86;UBERON:0001017!1.03e-07!82;UBERON:0003056!2.10e-07!61;UBERON:0002346!2.82e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.86e-17;22!UBERON:0000956;2.11e-14;25!UBERON:0000203;2.11e-14;25!UBERON:0001950;6.64e-14;20!UBERON:0002791;8.05e-13;32!UBERON:0001869;2.07e-12;32!UBERON:0001893;5.33e-11;34!UBERON:0003528;1.10e-10;34!UBERON:0002020;1.10e-10;34!UBERON:0001871;6.54e-09;6!UBERON:0002780;6.92e-08;41!UBERON:0001890;6.92e-08;41!UBERON:0002021;1.89e-07;5!UBERON:0000349;1.97e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.53e-17,22;UBERON:0000956,1.62e-14,25;UBERON:0000203,1.62e-14,25;UBERON:0002791,3.29e-14,32;UBERON:0001869,3.29e-14,32;UBERON:0001950,4.67e-14,20;UBERON:0003528,3.80e-13,34;UBERON:0002020,3.80e-13,34;UBERON:0001893,3.80e-13,34;UBERON:0002780,3.03e-10,41;UBERON:0001890,3.03e-10,41;UBERON:0003080,3.03e-10,41;UBERON:0006240,3.03e-10,41;UBERON:0001871,5.69e-09,6;UBERON:0001017,2.10e-08,81;UBERON:0000073,3.55e-08,53;UBERON:0002616,3.55e-08,53;UBERON:0002021,1.18e-07,5;UBERON:0001049,1.59e-07,56;UBERON:0005068,1.59e-07,56;UBERON:0006241,1.59e-07,56;UBERON:0007135,1.59e-07,56;UBERON:0000349,1.94e-07,5;UBERON:0001016,4.92e-07,89 | |||
|phase1_expression=0.908391896352783,1.07050261945492,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,2.19093027116212,0.975865597581014,0,0,0,0,0.958120975510189,0.502170558379211,0.687720651731561,0.903106483949403,0.944529375764151,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,1.40381113229099,0.651032612147555,0.671746422719773,0.971680998056939,0,0.581592955118259,0,0.485168122375632,0.697287110717054,0,0.929119112685311,0.863077176966451,0.512321413058201,0.236482229888585,1.03423704220986,1.93645405075148,2.70852973188684,2.07066573496865,1.09162460023138,0.674170453335254,1.22433556948361,0.320929027076094,0.639337125799041,1.9791078011203,0.398927315243264,0.852449501065388,1.16083695451434,0.56738522469114,0,1.25624332628372,2.08593167368081,0.434377689410233,0.605399502633369,0.736555271975129,0.316462387440884,0.633765858935825,0.425208599930087,0.209658645508376,0.673971786878971,0.600707571366025,0.48217676009124,0.570025487482497,0.79566670879636,0.730656615058536,0,0,0.889509253863555,0,0,0,0,0,1.70763890732835,0,1.14681968437569,0,0,0.263384084775077,0.393419540227666,3.53709686474248,1.02800749499755,0,0.651844533267181,0,1.94826728407911,0.557052284425868,1.17842362989935,0.664601683750863,0.541607727530031,1.5370958367081,1.1705341280389,0.493313713811028,1.65810010671509,0.579606171470105,0.741432815810302,0.535081656179426,0,0.339928028092699,0,0.34362744548263,2.27717722817553,0,0.651083453856419,0,0.752875595388864,0.76791966692651,2.49861453104692,0.236777252044017,0,1.61285394579786,0.534880391567015,1.30341963494519,0,0,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,1.10864698731282,0.527008714158756,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0,0,0,0,0.825354125820202,0,0.258416759169329,0,1.00416183829401,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0.633152558322899,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.80823028409406,0,0.201504196455281,0,0,0,0,0.365921118388786,0.265059536642971,0.464775771478074,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,2.0251139823042,0.621984346622316,0.432359860250884,0.25248486685276,0.571481048629521,1.14596527667483,1.17217447210047,0,0.822619941626588,1.50171528921959,0.857479297891735,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,1.19967589418468,1.2162378064119,2.00902836572851,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.784596007954691,0.591092280605782,1.2937654491571,0.513372145118994,1.01637849688985,2.60279707715243,2.31986643833309,1.17261385734044,4.46557126157214,11.9841123831549,32.9077605124427,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0.413536052245775,2.37285620900479,1.06727557803444,0,0,0.30239029332968,0,0,0,0.384417447767103,0,0.321707842287215,0,0,0,0,1.03850885836724,0.116210378459959,0,0.40101294060657,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0.192190067365106,0.127612712494584,0.10115778085555,2.32422774648643,0.62962469366128,0,0,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,2.84823593587081,0.952927101831156,1.64544909234478,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,1.48642540100575,0.28853842595289,0.142283686696828,2.07254154547469,0.59873811429845,0.383010740264733,0.846694330895531,1.62310970137278,3.08876895924805,0.912938716132769,1.72347885350326,2.50634477090067,0.50787533340481,1.1241165257259,1.61439765752838,0,0.687010689511529,0,0,0.500547425135725,0.586164286206121,0.278406173895242,2.46174797895425,0.811367035427949,0.99921590399346,1.4098700508785,0,0.439524537815682,0.36408156524854,0.222886768554957,0,0,0,0,4.97073823883149,2.53204949538923,0,0.824019371133798,0,0.796991953004279,0,0,0,0.123084805461069,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,1.11321717794222,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0.885741385813839,2.17073589525734,0,2.43274371848694,0,0.219385397153973,0,0.1394237442786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| ||
|short_description=p@chr10:11374858..11374881,+ | |short_description=p@chr10:11374858..11374881,+ | ||
}} | }} |
Latest revision as of 10:29, 23 July 2015
Short description: | p@chr10:11374858..11374881, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11374858..11374881, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.15e-14 | 168 |
hematopoietic oligopotent progenitor cell | 3.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.04e-13 | 161 |
hematopoietic cell | 1.20e-12 | 177 |
myeloid cell | 4.30e-10 | 108 |
common myeloid progenitor | 4.30e-10 | 108 |
leukocyte | 5.73e-10 | 136 |
neutrophil | 1.81e-08 | 3 |
granulocyte | 7.13e-08 | 8 |
nongranular leukocyte | 1.17e-07 | 115 |
myeloid leukocyte | 4.64e-07 | 72 |
neuronal stem cell | 9.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 6.53e-17 | 22 |
cerebral cortex | 1.62e-14 | 25 |
pallium | 1.62e-14 | 25 |
regional part of telencephalon | 3.29e-14 | 32 |
cerebral hemisphere | 3.29e-14 | 32 |
neocortex | 4.67e-14 | 20 |
brain grey matter | 3.80e-13 | 34 |
gray matter | 3.80e-13 | 34 |
telencephalon | 3.80e-13 | 34 |
regional part of forebrain | 3.03e-10 | 41 |
forebrain | 3.03e-10 | 41 |
anterior neural tube | 3.03e-10 | 41 |
future forebrain | 3.03e-10 | 41 |
temporal lobe | 5.69e-09 | 6 |
central nervous system | 2.10e-08 | 81 |
regional part of nervous system | 3.55e-08 | 53 |
regional part of brain | 3.55e-08 | 53 |
occipital lobe | 1.18e-07 | 5 |
neural tube | 1.59e-07 | 56 |
neural rod | 1.59e-07 | 56 |
future spinal cord | 1.59e-07 | 56 |
neural keel | 1.59e-07 | 56 |
limbic system | 1.94e-07 | 5 |
nervous system | 4.92e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.16e-07 | 39 |