FFCP PHASE1:Hg19::chr10:128148024..128148063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:128148024..128148063,- | |||
|description=CAGE_peak_at_chr10:128148024..128148063,- | |description=CAGE_peak_at_chr10:128148024..128148063,- | ||
|id=chr10:128148024..128148063,- | |id=chr10:128148024..128148063,- | ||
|ontology_enrichment_celltype=CL:0000055!3.47e-33!180;CL:0000048!3.79e-15!430;CL:0000057!8.49e-15!75;CL:0000680!1.72e-14!57;CL:0000056!1.72e-14!57;CL:0000355!1.72e-14!57;CL:0000723!2.31e-14!436;CL:0000034!2.33e-13!444;CL:0002371!2.35e-12!591;CL:0000187!3.15e-12!54;CL:0000183!5.21e-12!59;CL:0000144!1.82e-11!625;CL:0000393!1.08e-10!60;CL:0000211!1.08e-10!60;CL:0000192!3.33e-10!42;CL:0000514!3.33e-10!42;CL:0000548!1.99e-09!679;CL:0000004!1.99e-09!679;CL:0000255!1.99e-09!679;CL:0000136!2.16e-09!15;CL:0000499!2.64e-09!27;CL:0000359!3.29e-09!32;CL:0000012!3.77e-09!682;CL:0002620!1.74e-08!23;CL:0000327!2.09e-08!14;CL:0002320!4.00e-08!365;CL:0000003!1.49e-07!722;CL:0000219!7.30e-07!390 | |ontology_enrichment_celltype=CL:0000055!3.47e-33!180;CL:0000048!3.79e-15!430;CL:0000057!8.49e-15!75;CL:0000680!1.72e-14!57;CL:0000056!1.72e-14!57;CL:0000355!1.72e-14!57;CL:0000723!2.31e-14!436;CL:0000034!2.33e-13!444;CL:0002371!2.35e-12!591;CL:0000187!3.15e-12!54;CL:0000183!5.21e-12!59;CL:0000144!1.82e-11!625;CL:0000393!1.08e-10!60;CL:0000211!1.08e-10!60;CL:0000192!3.33e-10!42;CL:0000514!3.33e-10!42;CL:0000548!1.99e-09!679;CL:0000004!1.99e-09!679;CL:0000255!1.99e-09!679;CL:0000136!2.16e-09!15;CL:0000499!2.64e-09!27;CL:0000359!3.29e-09!32;CL:0000012!3.77e-09!682;CL:0002620!1.74e-08!23;CL:0000327!2.09e-08!14;CL:0002320!4.00e-08!365;CL:0000003!1.49e-07!722;CL:0000219!7.30e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000499;3.28e-12;28!CL:0000153;2.05e-11;9!CL:0000447;2.05e-11;9!CL:0000327;1.53e-10;15!CL:0000680;3.46e-10;7!CL:0000138;5.62e-10;6!CL:0000136;5.30e-09;13!CL:0000569;1.01e-08;4!CL:0000515;1.65e-07;3!CL:0002521;1.77e-07;3!CL:0002582;5.94e-07;3!CL:0002564;6.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.38e-12,427;CL:0000499,2.97e-12,28;CL:0000723,3.87e-12,433;CL:0000034,1.47e-11,441;CL:0000153,1.53e-11,9;CL:0000447,1.53e-11,9;CL:0000327,1.29e-10,15;CL:0000058,6.00e-10,6;CL:0000138,6.00e-10,6;CL:0000680,1.97e-09,58;CL:0000056,1.97e-09,58;CL:0000355,1.97e-09,58;CL:0002320,7.69e-09,361;CL:0000569,1.22e-08,4;CL:0000011,1.22e-08,4;CL:0000136,1.48e-07,15;CL:0002521,1.98e-07,3;CL:0002564,4.52e-07,3;CL:0000187,7.97e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000011;1.01e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.53e-16!70;UBERON:0000914!2.44e-16!83;UBERON:0002329!2.44e-16!83;UBERON:0003077!2.44e-16!83;UBERON:0003059!2.44e-16!83;UBERON:0007282!2.44e-16!83;UBERON:0009618!2.44e-16!83;UBERON:0007285!2.44e-16!83;UBERON:0000486!7.19e-14!82;UBERON:0001134!9.42e-13!61;UBERON:0002036!9.42e-13!61;UBERON:0003082!9.42e-13!61;UBERON:0002385!5.63e-12!63;UBERON:0001015!5.63e-12!63;UBERON:0000383!5.63e-12!63;UBERON:0002384!3.52e-09!375;UBERON:0002199!1.28e-08!45;UBERON:0002416!1.28e-08!45;UBERON:0001013!7.99e-08!14;UBERON:0004573!1.84e-07!33;UBERON:0004571!1.84e-07!33;UBERON:0002200!8.29e-07!11;UBERON:0006876!8.29e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;4.21e-12;8!UBERON:0000982;4.21e-12;8!UBERON:0004770;4.21e-12;8!UBERON:0011135;5.27e-11;5!UBERON:0002216;5.27e-11;5!UBERON:0011134;5.27e-11;5!UBERON:0002209;5.27e-11;5!UBERON:0002213;5.27e-11;5!UBERON:0007844;5.27e-11;5!UBERON:0011138;5.27e-11;5!UBERON:0001130;5.27e-11;5!UBERON:0001066;5.27e-11;5!UBERON:0001468;5.27e-11;5!UBERON:0001013;7.10e-09;14!UBERON:0002204;1.38e-08;70!UBERON:0002190;1.77e-07;3!UBERON:0001134;3.70e-07;16!UBERON:0002036;3.70e-07;16!UBERON:0002242;6.66e-07;3!UBERON:0002385;7.88e-07;31!UBERON:0001015;7.88e-07;31!UBERON:0000383;7.88e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.95e-12,8;UBERON:0000982,1.95e-12,8;UBERON:0004770,1.95e-12,8;UBERON:0002329,7.38e-12,71;UBERON:0003059,7.38e-12,71;UBERON:0007282,7.38e-12,71;UBERON:0004290,7.38e-12,71;UBERON:0009618,7.38e-12,71;UBERON:0003077,1.34e-11,72;UBERON:0007285,1.34e-11,72;UBERON:0007524,2.38e-11,73;UBERON:0011135,3.32e-11,5;UBERON:0002216,3.32e-11,5;UBERON:0011134,3.32e-11,5;UBERON:0002209,3.32e-11,5;UBERON:0002213,3.32e-11,5;UBERON:0005856,3.32e-11,5;UBERON:0005866,3.32e-11,5;UBERON:0005863,3.32e-11,5;UBERON:0007844,3.32e-11,5;UBERON:0011138,3.32e-11,5;UBERON:0001130,3.32e-11,5;UBERON:0001066,3.32e-11,5;UBERON:0001468,3.32e-11,5;UBERON:0000486,4.18e-11,83;UBERON:0002384,1.92e-10,371;UBERON:0007503,3.38e-10,78;UBERON:0001013,6.27e-09,14;UBERON:0001134,1.70e-08,62;UBERON:0002036,1.70e-08,62;UBERON:0003082,1.70e-08,62;UBERON:0002385,4.49e-08,64;UBERON:0001015,4.49e-08,64;UBERON:0000383,4.49e-08,64;UBERON:0002190,1.98e-07,3;UBERON:0002204,3.46e-07,167;UBERON:0002242,4.52e-07,3;UBERON:0003068,4.52e-07,3;UBERON:0002328,4.52e-07,3;UBERON:0004880,4.52e-07,3 | |||
|phase1_expression=0.54503513781167,2.35510576280081,1.9733616573436,0,0.893922188854576,0,2.53299878168311,30.9542737979147,2.35067065379855,0,0,0,0,8.91117741312336,4.97096063591874,0,1.20538905604795,1.46062018077475,3.41552959153355,2.58554221961255,1.22400414746552,0.313454721478088,0.85870796139317,2.05311637609326,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3372698286148,6.01605492763067,8.11140506180613,13.5198610998687,8.27279279514481,0.378139268656271,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0.163461903113459,1.36221684880438,1.15235184896,0,2.80944069147288,2.85235910772225,0.896692083310806,0.939475989150119,1.78060238804945,1.82586048712923,1.83738754129404,0,1.75653827998801,0,0,6.37112953356618,0,0.168336113954066,1.12606667884768,1.38532057742091,0,0,0,0,0.358779271377724,0,1.05965950579781,0.600182192168805,0.824420233907511,0,0.558350568994769,0.675105328965065,0.584622030967192,0,0.276149695926898,0,0,1.5112814734146,1.86516651541536,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,4.46076306776166,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,2.46688385559794,0.43596006883328,8.2138880119464,0,0,6.762422020448,0,0,0.514414748524284,0,2.1313774321288,0,0,0.823240336780769,5.21177894869976,0,0,0.301439377059586,0,0,0,0,0,6.9491208092559,3.44585807502342,0,2.75084482668401,5.75333703141074,5.37182889719687,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,3.43536176813592,2.50085260529839,1.89885516589815,0.207970861530807,0.535286966391485,0,0.468565659970853,1.80567659836631,0,1.03473071292505,1.32845119707087,1.10621501125022,0.173767228936166,1.17480694477644,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0,0,0.768834895534206,0.511707249066704,0,0,0.308419387605311,0.355123450626254,4.18848495670427,1.03850885836724,2.09178681227927,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,3.38906957652218,3.07007349452259,0.827019434907183,1.18162269355101,1.0151168573996,1.78975917573812,0,0,0,0,0,0.929691098594572,0.62962469366128,0.6970372701606,0,1.59691809095107,0,1.11194531462352,0.286249773483982,0.744316738719335,2.53103539774981,0.190630193923825,0.255897791311334,0,2.54562598340749,0,0.359744915166629,0.823611089208164,0.235624804691373,1.2130948894399,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0.545999645631943,0,1.13008116620243,0.551365343546124,0,0.438450885253763,1.15755106853338,0,1.21746226177622,0,0,0.143411352204052,0,0,0,1.89996871767898,1.31717957183961,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,1.71986032471617,0.387025325156341,0.365446585430928,0.656923656425674,0,0,0,0,0.397429223405979,0,0,0.961905843018405,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0.866851769704557,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,2.89659637035217,0.113312091520126,0,0,0.517131825446202,0.13223260174269,0.855434189421647,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,2.45076461410769,1.31149052283922,0,0,0,0,0,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,3.58211526928498,0.233713309847224,1.66441758450784,19.3191065380591,8.30174075783498,16.9064132103342,2.51724075236616,2.11723293268535,1.24349760466224,3.99208904972012,0.318593534327405,0,0.465788870628778,1.65882483136342,0.797525143673985,0.521745061811734,0.150257608997218,1.52322084867518,0.813741466409323,0.727394636810238,0.859284456339908,0,0,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,7.34264248434098,0,0,0.176689145945881,0,0.844712203265363,0,0,0.303859956177382,0,0,0,0,0,16.7125577952529,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0.128458450192919,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,15.7329953588746,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91529616043611,0.0679697329768317,0.0657727735628491,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,13.3388745835658,22.9329345354584,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr10:128148024..128148063,- | |short_description=p@chr10:128148024..128148063,- | ||
}} | }} |
Latest revision as of 11:31, 23 July 2015
Short description: | p@chr10:128148024..128148063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:128148024..128148063, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.38e-12 | 427 |
stromal cell | 2.97e-12 | 28 |
somatic stem cell | 3.87e-12 | 433 |
stem cell | 1.47e-11 | 441 |
GAG secreting cell | 1.53e-11 | 9 |
carbohydrate secreting cell | 1.53e-11 | 9 |
extracellular matrix secreting cell | 1.29e-10 | 15 |
chondroblast | 6.00e-10 | 6 |
chondrocyte | 6.00e-10 | 6 |
muscle precursor cell | 1.97e-09 | 58 |
myoblast | 1.97e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.97e-09 | 58 |
connective tissue cell | 7.69e-09 | 361 |
cardiac mesenchymal cell | 1.22e-08 | 4 |
migratory trunk neural crest cell | 1.22e-08 | 4 |
fat cell | 1.48e-07 | 15 |
subcutaneous fat cell | 1.98e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 4.52e-07 | 3 |
muscle cell | 7.97e-07 | 55 |