FFCP PHASE1:Hg19::chr10:129160986..129160991,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:129160986..129160991,+ | |||
|description=CAGE_peak_at_chr10:129160986..129160991,+ | |||
|id=chr10:129160986..129160991,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.13e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.25e-08,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-13!57;UBERON:0005068!1.47e-13!57;UBERON:0006241!1.47e-13!57;UBERON:0007135!1.47e-13!57;UBERON:0003075!9.41e-12!86;UBERON:0007284!9.41e-12!86;UBERON:0007023!1.10e-11!115;UBERON:0005743!1.25e-11!86;UBERON:0001017!1.91e-11!82;UBERON:0000955!3.79e-11!69;UBERON:0006238!3.79e-11!69;UBERON:0000073!3.90e-11!94;UBERON:0001016!3.90e-11!94;UBERON:0002346!1.33e-10!90;UBERON:0002020!3.06e-10!34;UBERON:0003528!3.06e-10!34;UBERON:0001893!8.78e-10!34;UBERON:0002616!1.08e-09!59;UBERON:0002791!1.60e-09!33;UBERON:0002780!8.50e-09!41;UBERON:0001890!8.50e-09!41;UBERON:0006240!8.50e-09!41;UBERON:0003080!2.08e-08!42;UBERON:0001869!2.27e-08!32;UBERON:0000153!3.08e-08!129;UBERON:0007811!3.08e-08!129;UBERON:0000033!6.06e-08!123;UBERON:0003056!1.39e-07!61;UBERON:0003076!6.00e-07!15;UBERON:0003057!6.00e-07!15;UBERON:0002619!6.01e-07!22;UBERON:0000062!8.94e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;8.13e-17;5!UBERON:0001876;3.02e-11;2!UBERON:0001897;3.02e-11;2!UBERON:0001954;3.02e-11;2!UBERON:0002702;3.02e-11;2!UBERON:0003022;3.02e-11;2!UBERON:0002421;3.02e-11;2!UBERON:0010225;3.02e-11;2!UBERON:0002600;3.02e-11;2!UBERON:0002619;2.13e-08;22!UBERON:0001870;6.34e-08;3!UBERON:0000956;1.71e-07;25!UBERON:0000203;1.71e-07;25!UBERON:0000073;6.72e-07;53!UBERON:0002616;6.72e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,5.45e-17,5;UBERON:0001876,2.02e-11,2;UBERON:0002702,2.47e-11,2;UBERON:0001954,2.73e-11,2;UBERON:0003022,2.73e-11,2;UBERON:0002421,2.73e-11,2;UBERON:0002600,2.73e-11,2;UBERON:0001897,4.09e-11,2;UBERON:0010225,4.09e-11,2;UBERON:0000073,2.49e-09,53;UBERON:0002616,2.49e-09,53;UBERON:0001049,7.64e-09,56;UBERON:0005068,7.64e-09,56;UBERON:0006241,7.64e-09,56;UBERON:0007135,7.64e-09,56;UBERON:0002619,1.79e-08,22;UBERON:0001870,5.54e-08,3;UBERON:0002780,6.13e-08,41;UBERON:0001890,6.13e-08,41;UBERON:0003080,6.13e-08,41;UBERON:0006240,6.13e-08,41;UBERON:0000956,1.46e-07,25;UBERON:0000203,1.46e-07,25;UBERON:0000955,3.28e-07,68;UBERON:0006238,3.28e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.89694817844431,0,0.211931901159562,1.20036438433761,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0,1.00973509697646,0,0.323292113637624,1.77504796258307,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.290033387828457,0,0,0.165284915360978,0,0.893288987462089,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,2.91681557728498,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,1.9882952955326,0.140669416410513,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.371072392647405,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0.221158519862449,0,0,0,0.139423744278603,0.307801034015188,0,0,0.269272933229316,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.606610196826093,0,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0.207376382794494,0,0,0,0,0.569219092059585,0.277349346026277,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0.0730893170861856,0,0.0969890164884194,0.529536760149002,0,0.137041924646751,0.19871461170299,0.189932387867636,0,0.0801588202515337,0,0.39961921916426,0,0.114536596165916,0.171594997861965,0,0.745515213392595,0,0,0,0.101998217636322,0.288950589901519,0,0.547621515567972,0,0,0,0,0.687481272035051,0.717873024576814,0,0,0,0.268733889946905,0.360299883542404,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0.472091293214983,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,1.77213635993397,0,0.250381861413,0.573409195690071,0.332787154610557,0.869349641179368,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.302461847526478,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,0,0.219284049578707,0.176689145945881,0,0.337884881306145,0.76872455576384,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.513833800771676,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0,0.115525666150338,0,0.690359926060101,0,0.0752103283492573,0,0,0.261906694481422,0,0.739280431085226,0.0675375846183947,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0.236387681767936,0,0.078493092850514,0.314231179832004,0.280272163313789,0.913158720509496,0.215927591218621,0.47775168788705,0.142953088353313,0.158013611732727,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0.255640214277473,0,0.22910686854405,0,0,0,0.196300467230486,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0.11294608203896,0.21988103349085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| |||
|short_description=p@chr10:129160986..129160991,+ | |||
}} |
Latest revision as of 11:34, 23 July 2015
Short description: | p@chr10:129160986..129160991, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129160986..129160991, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.25e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
limbic system | 5.45e-17 | 5 |
amygdala | 2.02e-11 | 2 |
middle frontal gyrus | 2.47e-11 | 2 |
Ammon's horn | 2.73e-11 | 2 |
lobe parts of cerebral cortex | 2.73e-11 | 2 |
hippocampal formation | 2.73e-11 | 2 |
limbic lobe | 2.73e-11 | 2 |
dorsal plus ventral thalamus | 4.09e-11 | 2 |
thalamic complex | 4.09e-11 | 2 |
regional part of nervous system | 2.49e-09 | 53 |
regional part of brain | 2.49e-09 | 53 |
neural tube | 7.64e-09 | 56 |
neural rod | 7.64e-09 | 56 |
future spinal cord | 7.64e-09 | 56 |
neural keel | 7.64e-09 | 56 |
regional part of cerebral cortex | 1.79e-08 | 22 |
frontal cortex | 5.54e-08 | 3 |
regional part of forebrain | 6.13e-08 | 41 |
forebrain | 6.13e-08 | 41 |
anterior neural tube | 6.13e-08 | 41 |
future forebrain | 6.13e-08 | 41 |
cerebral cortex | 1.46e-07 | 25 |
pallium | 1.46e-07 | 25 |
brain | 3.28e-07 | 68 |
future brain | 3.28e-07 | 68 |