FFCP PHASE1:Hg19::chr10:18802049..18802053,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18802049..18802053,+ | |||
|description=CAGE_peak_at_chr10:18802049..18802053,+ | |description=CAGE_peak_at_chr10:18802049..18802053,+ | ||
|id=chr10:18802049..18802053,+ | |id=chr10:18802049..18802053,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.21e-12;82!UBERON:0005754;2.07e-10;1!UBERON:0004140;2.07e-10;1 | |||
|ontology_enrichment_disease=DOID:171!5.03e-09!10 | |ontology_enrichment_disease=DOID:171!5.03e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;7.72e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.05e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-37!115;UBERON:0001049!2.70e-33!57;UBERON:0005068!2.70e-33!57;UBERON:0006241!2.70e-33!57;UBERON:0007135!2.70e-33!57;UBERON:0002346!6.63e-32!90;UBERON:0002616!1.67e-31!59;UBERON:0000073!5.42e-31!94;UBERON:0001016!5.42e-31!94;UBERON:0001017!1.72e-30!82;UBERON:0005743!7.03e-30!86;UBERON:0000955!8.09e-30!69;UBERON:0006238!8.09e-30!69;UBERON:0003075!8.72e-29!86;UBERON:0007284!8.72e-29!86;UBERON:0002780!3.79e-28!41;UBERON:0001890!3.79e-28!41;UBERON:0006240!3.79e-28!41;UBERON:0003080!2.97e-27!42;UBERON:0002020!3.15e-25!34;UBERON:0003528!3.15e-25!34;UBERON:0001869!3.36e-25!32;UBERON:0001893!2.79e-23!34;UBERON:0002791!5.02e-22!33;UBERON:0000924!1.06e-21!173;UBERON:0006601!1.06e-21!173;UBERON:0003056!6.80e-20!61;UBERON:0004121!2.07e-19!169;UBERON:0002619!2.65e-19!22;UBERON:0000033!2.72e-19!123;UBERON:0000956!3.54e-18!25;UBERON:0000203!3.54e-18!25;UBERON:0000153!1.04e-17!129;UBERON:0007811!1.04e-17!129;UBERON:0001950!1.36e-16!20;UBERON:0000200!4.40e-10!6;UBERON:0002308!1.59e-08!9;UBERON:0000125!1.59e-08!9;UBERON:0001872!2.64e-08!5;UBERON:0000369!6.85e-08!4;UBERON:0002435!6.85e-08!4;UBERON:0000204!6.85e-08!4;UBERON:0010082!6.85e-08!4;UBERON:0003296!7.45e-08!4;UBERON:0010133!7.45e-08!4;UBERON:0004733!1.19e-07!12;UBERON:0002028!1.19e-07!12;UBERON:0007277!1.19e-07!12;UBERON:0003076!2.40e-07!15;UBERON:0003057!2.40e-07!15;UBERON:0000481!4.49e-07!347;UBERON:0004732!6.25e-07!13;UBERON:0002298!6.92e-07!8;UBERON:0001871!7.72e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.65e-21;4!UBERON:0010133;2.65e-21;4!UBERON:0002346;2.94e-21;4!UBERON:0000923;2.94e-21;4!UBERON:0010316;2.94e-21;4!UBERON:0005291;2.94e-21;4!UBERON:0001905;1.49e-19;2!UBERON:0002757;1.49e-19;2!UBERON:0010134;1.49e-19;2!UBERON:0005408;1.49e-19;2!UBERON:0001899;1.49e-19;2!UBERON:0002702;4.50e-19;2!UBERON:0002050;3.91e-17;5!UBERON:0005423;3.91e-17;5!UBERON:0000200;3.59e-14;6!UBERON:0001870;4.83e-13;3!UBERON:0005383;4.83e-13;3!UBERON:0005382;4.83e-13;3!UBERON:0001017;8.48e-13;75!UBERON:0000073;1.66e-12;53!UBERON:0002616;1.66e-12;53!UBERON:0001894;1.98e-12;7!UBERON:0002780;2.64e-12;41!UBERON:0001890;2.64e-12;41!UBERON:0000955;4.73e-12;68!UBERON:0002791;1.62e-11;32!UBERON:0003528;3.24e-11;34!UBERON:0002020;3.24e-11;34!UBERON:0001869;7.45e-11;32!UBERON:0001950;1.15e-10;20!UBERON:0001893;1.49e-10;34!UBERON:0001874;2.07e-10;1!UBERON:0000998;2.07e-10;1!UBERON:0002146;2.07e-10;1!UBERON:0006868;2.07e-10;1!UBERON:0005623;2.07e-10;1!UBERON:0002784;3.01e-10;4!UBERON:0000369;5.20e-10;4!UBERON:0002435;5.20e-10;4!UBERON:0000204;5.20e-10;4!UBERON:0002619;1.00e-09;22!UBERON:0000956;1.38e-08;25!UBERON:0000203;1.38e-08;25!UBERON:0001016;2.16e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.13e-27,86;UBERON:0000955,4.27e-23,68;UBERON:0006238,4.27e-23,68;UBERON:0000073,2.43e-22,53;UBERON:0002616,2.43e-22,53;UBERON:0001049,4.58e-21,56;UBERON:0005068,4.58e-21,56;UBERON:0006241,4.58e-21,56;UBERON:0007135,4.58e-21,56;UBERON:0003296,6.96e-21,4;UBERON:0010133,6.96e-21,4;UBERON:0002780,3.60e-20,41;UBERON:0001890,3.60e-20,41;UBERON:0003080,3.60e-20,41;UBERON:0006240,3.60e-20,41;UBERON:0002702,1.49e-19,2;UBERON:0001905,3.44e-19,2;UBERON:0002757,3.44e-19,2;UBERON:0010134,3.44e-19,2;UBERON:0005408,3.44e-19,2;UBERON:0001899,3.44e-19,2;UBERON:0001017,4.03e-19,81;UBERON:0003075,4.34e-19,82;UBERON:0007284,4.34e-19,82;UBERON:0001016,5.01e-17,89;UBERON:0003056,5.65e-16,61;UBERON:0010371,1.32e-14,104;UBERON:0000200,3.00e-14,6;UBERON:0004121,4.82e-14,171;UBERON:0000924,4.82e-14,171;UBERON:0006601,4.82e-14,171;UBERON:0005383,2.05e-13,3;UBERON:0005382,2.05e-13,3;UBERON:0001870,2.32e-13,3;UBERON:0007023,2.57e-13,114;UBERON:0002791,6.85e-13,32;UBERON:0001869,6.85e-13,32;UBERON:0010314,7.24e-13,132;UBERON:0001894,3.41e-12,7;UBERON:0006222,3.41e-12,7;UBERON:0003528,4.11e-12,34;UBERON:0002020,4.11e-12,34;UBERON:0001893,4.11e-12,34;UBERON:0001950,9.58e-11,20;UBERON:0001874,9.84e-11,1;UBERON:0000998,2.28e-10,1;UBERON:0006868,2.28e-10,1;UBERON:0000369,2.75e-10,4;UBERON:0002435,2.75e-10,4;UBERON:0000204,2.75e-10,4;UBERON:0010082,2.75e-10,4;UBERON:0002146,3.01e-10,1;UBERON:0005623,3.01e-10,1;UBERON:0002784,4.55e-10,4;UBERON:0002619,8.48e-10,22;UBERON:0000956,1.20e-08,25;UBERON:0000203,1.20e-08,25;UBERON:0000025,6.67e-07,192 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.844175070377856,0,2.32216445855572,0.295547618953547,0.219385397153973,0.21787692703798,0,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.63186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0.886351143382302,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,1.14580212005842,0.717873024576814,0.399358000997982,0.858452096273142,0,1.67958681216816,0,0,0,0,0,0,0.254019996197353,0.795229689809303,0.681017030557878,0,0,0,0,0,0.789744236554321,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.92562821219883,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,1.752673029891,1.14681839138014,0.776503360757966,0.248385611765534,1.38348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0.314531883711793,0.109209638192014,0,1.2754495206101,2.47871528518004,0,0,0,0.80057074828547,0.352675943690684,0,0.642292250964595,0,1.43670473151436,0,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,1.44680757550829,0.317079050969534,0.546974809018219,0,0.496211178389294,1.23109871051734,0,1.07140367175657,3.02655349996942,0.606965604236632,1.13831095675649,0,0,0,0.475788130837822,0.197318320688547,0,0,0.078493092850514,1.88538707899202,0,0,0,0,0.285906176706625,1.10609528212909,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,0,0.385870790539723,0.218559560503957,0,1.96118657403124,0.235676547101626,0.392616934229891,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.844175070377856,0,2.32216445855572,0.295547618953547,0.219385397153973,0.21787692703798,0,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.63186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0.886351143382302,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,1.14580212005842,0.717873024576814,0.399358000997982,0.858452096273142,0,1.67958681216816,0,0,0,0,0,0,0.254019996197353,0.795229689809303,0.681017030557878,0,0,0,0,0,0.789744236554321,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.92562821219883,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,1.752673029891,1.14681839138014,0.776503360757966,0.248385611765534,1.38348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0.314531883711793,0.109209638192014,0,1.2754495206101,2.47871528518004,0,0,0,0.80057074828547,0.352675943690684,0,0.642292250964595,0,1.43670473151436,0,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,1.44680757550829,0.317079050969534,0.546974809018219,0,0.496211178389294,1.23109871051734,0,1.07140367175657,3.02655349996942,0.606965604236632,1.13831095675649,0,0,0,0.475788130837822,0.197318320688547,0,0,0.078493092850514,1.88538707899202,0,0,0,0,0.285906176706625,1.10609528212909,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,0,0.385870790539723,0.218559560503957,0,1.96118657403124,0.235676547101626,0.392616934229891,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | ||
|short_description=p@chr10:18802049..18802053,+ | |short_description=p@chr10:18802049..18802053,+ | ||
}} | }} |
Latest revision as of 12:24, 23 July 2015
Short description: | p@chr10:18802049..18802053, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18802049..18802053, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.05e-09 | 10 |