FFCP PHASE1:Hg19::chr10:23858616..23858621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:23858616..23858621,+ | |||
|coexpression_cluster_id=C203 | |coexpression_cluster_id=C203 | ||
|description=CAGE_peak_at_chr10:23858616..23858621,+ | |description=CAGE_peak_at_chr10:23858616..23858621,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2 | |ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0003056;1.47e-09;3!UBERON:0005062;1.75e-07;4!UBERON:0007284;1.75e-07;4 | |ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0003056;1.47e-09;3!UBERON:0005062;1.75e-07;4!UBERON:0007284;1.75e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;8.89e-08;31!DOID:1240;2.22e-07;39 | |ontology_enrichment_disease_v019=DOID:8692;8.89e-08;31!DOID:1240;2.22e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,6.69e-08,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.72e-26;1!UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0005208;6.72e-26;1!UBERON:0004145;6.72e-26;1!UBERON:0005946;6.72e-26;1!UBERON:0005965;6.72e-26;1!UBERON:0002078;6.72e-26;1!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0002081;1.14e-13;2!UBERON:0002133;1.14e-13;2!UBERON:0003978;1.47e-09;3!UBERON:0004151;1.47e-09;3!UBERON:0000946;1.47e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002134;6.72e-26;1!UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0005208;6.72e-26;1!UBERON:0004145;6.72e-26;1!UBERON:0005946;6.72e-26;1!UBERON:0005965;6.72e-26;1!UBERON:0002078;6.72e-26;1!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0002081;1.14e-13;2!UBERON:0002133;1.14e-13;2!UBERON:0003978;1.47e-09;3!UBERON:0004151;1.47e-09;3!UBERON:0000946;1.47e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.61e-26,1;UBERON:0005208,4.61e-26,1;UBERON:0005946,4.61e-26,1;UBERON:0005965,4.61e-26,1;UBERON:0002078,4.61e-26,1;UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0002081,9.40e-14,2;UBERON:0002133,9.40e-14,2;UBERON:0010227,9.40e-14,2;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0003978,1.30e-09,3;UBERON:0009751,1.30e-09,3;UBERON:0004151,1.30e-09,3;UBERON:0000946,1.30e-09,3;UBERON:0002523,1.30e-09,3;UBERON:0005983,1.30e-09,3;UBERON:0004145,1.30e-09,3;UBERON:0002165,1.30e-09,3;UBERON:0002062,1.30e-09,3;UBERON:0007280,1.30e-09,3;UBERON:0001781,1.69e-07,4 | |||
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| ||
|short_description=p@chr10:23858616..23858621,+ | |short_description=p@chr10:23858616..23858621,+ | ||
}} | }} |
Latest revision as of 12:41, 23 July 2015
Short description: | p@chr10:23858616..23858621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:23858616..23858621, + |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.61e-26 | 1 |
right atrium valve | 4.61e-26 | 1 |
outflow tract of atrium | 4.61e-26 | 1 |
outflow part of right atrium | 4.61e-26 | 1 |
right cardiac atrium | 4.61e-26 | 1 |
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
cardiac atrium | 9.40e-14 | 2 |
atrioventricular valve | 9.40e-14 | 2 |
future cardiac atrium | 9.40e-14 | 2 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
valve | 1.30e-09 | 3 |
cardiac mesenchyme | 1.30e-09 | 3 |
cardiac chamber | 1.30e-09 | 3 |
cardial valve | 1.30e-09 | 3 |
tunica intima | 1.30e-09 | 3 |
heart layer | 1.30e-09 | 3 |
outflow tract | 1.30e-09 | 3 |
endocardium | 1.30e-09 | 3 |
endocardial cushion | 1.30e-09 | 3 |
presumptive endocardium | 1.30e-09 | 3 |
layer of retina | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.69e-08 | 31 |