FFCP PHASE1:Hg19::chr10:3954205..3954224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3954205..3954224,+ | |||
|coexpression_cluster_id=C3015 | |||
|description=CAGE_peak_at_chr10:3954205..3954224,+ | |description=CAGE_peak_at_chr10:3954205..3954224,+ | ||
|id=chr10:3954205..3954224,+ | |id=chr10:3954205..3954224,+ | ||
|ontology_enrichment_celltype=CL:0000244!2.05e-10!4;CL:0000731!2.05e-10!4;CL:0002076!2.15e-09!43;CL:0002541!4.14e-08!3;CL:0000622!5.17e-07!5;CL:0002621!6.98e-07!3;CL:0002623!8.92e-07!3 | |ontology_enrichment_celltype=CL:0000244!2.05e-10!4;CL:0000731!2.05e-10!4;CL:0002076!2.15e-09!43;CL:0002541!4.14e-08!3;CL:0000622!5.17e-07!5;CL:0002621!6.98e-07!3;CL:0002623!8.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.85e-26;4!CL:0000731;3.85e-26;4!CL:0002541;1.05e-19;3!CL:0000039;9.70e-09;7!CL:0000586;9.70e-09;7!CL:0002368;1.32e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.73e-26,4;CL:0000731,3.73e-26,4;CL:0002541,9.54e-20,3;CL:0000039,9.09e-09,7;CL:0000586,9.09e-09,7;CL:0002368,1.45e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.18e-14;4!UBERON:0007284;5.18e-14;4!UBERON:0004140;1.25e-07;1!UBERON:0010226;1.61e-07;1!UBERON:0000358;2.14e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.51e-07;1!DOID:10165;3.51e-07;1!DOID:1798;3.51e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.66e-07,1;DOID:10165,2.66e-07,1;DOID:1798,2.66e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.34e-12!115;UBERON:0000161!1.83e-09!35;UBERON:0005631!7.24e-09!14;UBERON:0000158!7.24e-09!14;UBERON:0000365!2.77e-08!5;UBERON:0000476!4.14e-08!3;UBERON:0000920!4.14e-08!3;UBERON:0000166!9.99e-08!21;UBERON:0003978!1.18e-07!3;UBERON:0009751!1.18e-07!3;UBERON:0000946!1.18e-07!3;UBERON:0002523!1.18e-07!3;UBERON:0005983!1.18e-07!3;UBERON:0002165!1.18e-07!3;UBERON:0002062!1.18e-07!3;UBERON:0007280!1.18e-07!3;UBERON:0001896!2.40e-07!3;UBERON:0005290!2.40e-07!3;UBERON:0010096!2.40e-07!3;UBERON:0001949!6.98e-07!3;UBERON:0005910!7.31e-07!6;UBERON:0006947!9.87e-07!3;UBERON:0004054!9.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.89e-21;5!UBERON:0003124;1.05e-19;3!UBERON:0000920;1.05e-19;3!UBERON:0003978;1.73e-18;3!UBERON:0000946;1.73e-18;3!UBERON:0005910;1.71e-17;6!UBERON:0002133;1.08e-12;2!UBERON:0007100;3.74e-11;25!UBERON:0001896;3.45e-09;3!UBERON:0005290;3.45e-09;3!UBERON:0004151;5.62e-09;3!UBERON:0000486;8.51e-09;12!UBERON:0002084;1.61e-07;1!UBERON:0002146;1.61e-07;1!UBERON:0002082;1.61e-07;1!UBERON:0005623;1.61e-07;1!UBERON:0000996;3.51e-07;1!UBERON:0002135;3.51e-07;1!UBERON:0002134;3.51e-07;1!UBERON:0002426;3.51e-07;1!UBERON:0003831;3.51e-07;1!UBERON:0003898;3.51e-07;1!UBERON:0004830;3.51e-07;1!UBERON:0005208;3.51e-07;1!UBERON:0003830;3.51e-07;1!UBERON:0005175;3.51e-07;1!UBERON:0001774;3.51e-07;1!UBERON:0004145;3.51e-07;1!UBERON:0005946;3.51e-07;1!UBERON:0001103;3.51e-07;1!UBERON:0005965;3.51e-07;1!UBERON:0002078;3.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.75e-21,5;UBERON:0000920,9.54e-20,3;UBERON:0003978,1.73e-18,3;UBERON:0009751,1.73e-18,3;UBERON:0000946,1.73e-18,3;UBERON:0002523,1.73e-18,3;UBERON:0005983,1.73e-18,3;UBERON:0002165,1.73e-18,3;UBERON:0002062,1.73e-18,3;UBERON:0007280,1.73e-18,3;UBERON:0005910,1.68e-17,6;UBERON:0002133,1.01e-12,2;UBERON:0007100,2.93e-10,27;UBERON:0001896,3.67e-09,3;UBERON:0005290,3.67e-09,3;UBERON:0010096,3.67e-09,3;UBERON:0004151,5.29e-09,3;UBERON:0003124,9.57e-09,7;UBERON:0004797,3.20e-08,7;UBERON:0002084,1.61e-07,1;UBERON:0002082,1.61e-07,1;UBERON:0010226,1.61e-07,1;UBERON:0002146,1.72e-07,1;UBERON:0005623,1.72e-07,1;UBERON:0002426,2.83e-07,1;UBERON:0003831,2.83e-07,1;UBERON:0003898,2.83e-07,1;UBERON:0004830,2.83e-07,1;UBERON:0003830,2.83e-07,1;UBERON:0005175,2.83e-07,1;UBERON:0001774,2.83e-07,1;UBERON:0001103,2.83e-07,1;UBERON:0010084,2.83e-07,1;UBERON:0002134,3.20e-07,1;UBERON:0005208,3.20e-07,1;UBERON:0005946,3.20e-07,1;UBERON:0005965,3.20e-07,1;UBERON:0002078,3.20e-07,1;UBERON:0002135,3.62e-07,1;UBERON:0000996,4.09e-07,1 | |||
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| ||
|short_description=p@chr10:3954205..3954224,+ | |short_description=p@chr10:3954205..3954224,+ | ||
}} | }} |
Latest revision as of 13:39, 23 July 2015
Short description: | p@chr10:3954205..3954224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3954205..3954224, + |
Coexpression cluster: | C3015_Urothelial_chorionic_medulla_choriocarcinoma_Small_pancreatic_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.73e-26 | 4 |
urothelial cell | 3.73e-26 | 4 |
chorionic membrane mesenchymal stem cell | 9.54e-20 | 3 |
germ line cell | 9.09e-09 | 7 |
germ cell | 9.09e-09 | 7 |
respiratory epithelial cell | 1.45e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.66e-07 | 1 |
endocrine pancreas cancer | 2.66e-07 | 1 |
pancreatic endocrine carcinoma | 2.66e-07 | 1 |