FFCP PHASE1:Hg19::chr10:71850931..71850940,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:71850931..71850940,+ | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_at_chr10:71850931..71850940,+ | |description=CAGE_peak_at_chr10:71850931..71850940,+ | ||
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|ontology_enrichment_celltype=CL:0000181!3.75e-17!12;CL:0000417!3.75e-17!12;CL:0000668!3.75e-17!12;CL:0000414!3.75e-17!12;CL:0000412!3.75e-17!12;CL:0000182!3.75e-17!12;CL:0002563!1.11e-13!4;CL:0000223!6.43e-10!59;CL:0002253!9.87e-08!2 | |ontology_enrichment_celltype=CL:0000181!3.75e-17!12;CL:0000417!3.75e-17!12;CL:0000668!3.75e-17!12;CL:0000414!3.75e-17!12;CL:0000412!3.75e-17!12;CL:0000182!3.75e-17!12;CL:0002563!1.11e-13!4;CL:0000223!6.43e-10!59;CL:0002253!9.87e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;6.30e-26;2!CL:0000182;1.57e-17;12!CL:0002563;1.06e-13;4 | |ontology_enrichment_celltype_v019=CL:0002253;6.30e-26;2!CL:0000182;1.57e-17;12!CL:0002563;1.06e-13;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.56e-26,2;CL:0000182,1.85e-17,12;CL:0002563,1.00e-13,4;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.14e-19;11!UBERON:0009497;2.84e-16;13!UBERON:0003104;6.32e-15;31!UBERON:0001041;1.17e-07;30 | |ontology_enrichment_development_v019=UBERON:0004161;5.14e-19;11!UBERON:0009497;2.84e-16;13!UBERON:0003104;6.32e-15;31!UBERON:0001041;1.17e-07;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr10:71850931..71850940,+ | |short_description=p@chr10:71850931..71850940,+ | ||
}} | }} |
Latest revision as of 15:08, 23 July 2015
Short description: | p@chr10:71850931..71850940, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:71850931..71850940, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.56e-26 | 2 |
hepatocyte | 1.85e-17 | 12 |
intestinal epithelial cell | 1.00e-13 | 4 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.00e-13 | 4 |
intestinal mucosa | 1.00e-13 | 4 |
wall of intestine | 1.00e-13 | 4 |
gastrointestinal system mucosa | 1.00e-13 | 4 |
gastrointestinal system epithelium | 1.00e-13 | 4 |
intestinal epithelium | 1.00e-13 | 4 |
intestine | 4.07e-12 | 17 |
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
small intestine | 2.66e-11 | 4 |
lower digestive tract | 2.94e-11 | 5 |
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
gut epithelium | 3.93e-09 | 54 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
gastrointestinal system | 1.03e-08 | 25 |
sac | 1.20e-08 | 26 |
epithelium of mucosa | 1.59e-07 | 8 |
subdivision of digestive tract | 1.75e-07 | 118 |
exocrine gland | 2.05e-07 | 31 |
exocrine system | 2.05e-07 | 31 |
colon | 7.91e-07 | 9 |
simple columnar epithelium | 7.91e-07 | 9 |