FFCP PHASE1:Hg19::chr10:79617215..79617226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79617215..79617226,- | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_at_chr10:79617215..79617226,- | |description=CAGE_peak_at_chr10:79617215..79617226,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!2.81e-11!3;CL:1000415!6.39e-08!2 | |ontology_enrichment_celltype=CL:0002541!2.81e-11!3;CL:1000415!6.39e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.05e-15;7!CL:0000586;3.05e-15;7 | |ontology_enrichment_celltype_v019=CL:0000039;3.05e-15;7!CL:0000586;3.05e-15;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.98e-15,7;CL:0000586,2.98e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.49e-23;2!UBERON:0005754;7.88e-13;1!UBERON:0003124;1.32e-12;1!UBERON:0006242;4.31e-12;1 | |ontology_enrichment_development_v019=UBERON:0007297;2.49e-23;2!UBERON:0005754;7.88e-13;1!UBERON:0003124;1.32e-12;1!UBERON:0006242;4.31e-12;1 | ||
|ontology_enrichment_disease=DOID:5093!3.13e-09!4;DOID:1612!3.13e-09!4 | |ontology_enrichment_disease=DOID:5093!3.13e-09!4;DOID:1612!3.13e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;4.19e-25;4!DOID:1612;4.19e-25;4!DOID:1799;1.66e-12;1!DOID:10165;1.66e-12;1!DOID:1798;1.66e-12;1 | |ontology_enrichment_disease_v019=DOID:5093;4.19e-25;4!DOID:1612;4.19e-25;4!DOID:1799;1.66e-12;1!DOID:10165;1.66e-12;1!DOID:1798;1.66e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,4.95e-25,4;DOID:1612,4.95e-25,4;DOID:1799,1.57e-12,1;DOID:10165,1.57e-12,1;DOID:1798,1.57e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.12e-17!115;UBERON:0006947!1.50e-12!3;UBERON:0004054!1.50e-12!3;UBERON:0002110!2.27e-11!3;UBERON:0006242!2.27e-11!3;UBERON:0000476!2.81e-11!3;UBERON:0000920!2.81e-11!3;UBERON:0005904!1.65e-09!4;UBERON:0000007!1.61e-08!2;UBERON:0003124!1.63e-08!7 | |ontology_enrichment_uberon=UBERON:0007023!4.12e-17!115;UBERON:0006947!1.50e-12!3;UBERON:0004054!1.50e-12!3;UBERON:0002110!2.27e-11!3;UBERON:0006242!2.27e-11!3;UBERON:0000476!2.81e-11!3;UBERON:0000920!2.81e-11!3;UBERON:0005904!1.65e-09!4;UBERON:0000007!1.61e-08!2;UBERON:0003124!1.63e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.07e-34;3!UBERON:0004054;3.07e-34;3!UBERON:0005904;7.23e-26;4!UBERON:0000310;8.45e-18;10!UBERON:0001443;3.29e-16;11!UBERON:0000998;7.88e-13;1!UBERON:0006868;7.88e-13;1!UBERON:0001000;9.92e-13;1!UBERON:0005352;9.92e-13;1!UBERON:0001301;2.75e-12;1!UBERON:0000058;1.02e-10;10!UBERON:0003135;8.60e-10;11!UBERON:0003101;2.33e-08;22!UBERON:0000079;2.33e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0006947;3.07e-34;3!UBERON:0004054;3.07e-34;3!UBERON:0005904;7.23e-26;4!UBERON:0000310;8.45e-18;10!UBERON:0001443;3.29e-16;11!UBERON:0000998;7.88e-13;1!UBERON:0006868;7.88e-13;1!UBERON:0001000;9.92e-13;1!UBERON:0005352;9.92e-13;1!UBERON:0001301;2.75e-12;1!UBERON:0000058;1.02e-10;10!UBERON:0003135;8.60e-10;11!UBERON:0003101;2.33e-08;22!UBERON:0000079;2.33e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.07e-34,3;UBERON:0004054,3.07e-34,3;UBERON:0005904,7.23e-26,4;UBERON:0000310,9.43e-18,10;UBERON:0001443,3.63e-16,11;UBERON:0000998,7.89e-13,1;UBERON:0006868,7.89e-13,1;UBERON:0001000,9.92e-13,1;UBERON:0005352,9.92e-13,1;UBERON:0001301,2.75e-12,1;UBERON:0003135,8.60e-10,11;UBERON:0003101,2.24e-08,22;UBERON:0000079,2.24e-08,22;UBERON:0004175,2.03e-07,25 | |||
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| ||
|short_description=p@chr10:79617215..79617226,- | |short_description=p@chr10:79617215..79617226,- | ||
}} | }} |
Latest revision as of 15:49, 23 July 2015
Short description: | p@chr10:79617215..79617226, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79617215..79617226, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.98e-15 | 7 |
germ cell | 2.98e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.07e-34 | 3 |
internal male genitalia | 3.07e-34 | 3 |
duct of male reproductive system | 7.23e-26 | 4 |
breast | 9.43e-18 | 10 |
chest | 3.63e-16 | 11 |
seminal vesicle | 7.89e-13 | 1 |
seminal fluid secreting gland | 7.89e-13 | 1 |
vas deferens | 9.92e-13 | 1 |
spermatic cord | 9.92e-13 | 1 |
epididymis | 2.75e-12 | 1 |
male reproductive organ | 8.60e-10 | 11 |
male organism | 2.24e-08 | 22 |
male reproductive system | 2.24e-08 | 22 |
internal genitalia | 2.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.95e-25 | 4 |
breast cancer | 4.95e-25 | 4 |
islet cell tumor | 1.57e-12 | 1 |
endocrine pancreas cancer | 1.57e-12 | 1 |
pancreatic endocrine carcinoma | 1.57e-12 | 1 |