FFCP PHASE1:Hg19::chr10:8087281..8087303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:8087281..8087303,+ | |||
|coexpression_cluster_id=C3050 | |||
|description=CAGE_peak_at_chr10:8087281..8087303,+ | |||
|id=chr10:8087281..8087303,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.90e-12!254;CL:0000244!9.92e-07!4;CL:0000731!9.92e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.07e-13;5!CL:0002577;9.11e-13;3!CL:0000244;5.27e-09;4!CL:0000731;5.27e-09;4!CL:1000415;6.68e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.05e-12,3;CL:0000244,6.17e-09,4;CL:0000731,6.17e-09,4;CL:1000415,6.69e-09,2;CL:0000066,8.88e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.97e-09;2 | |||
|ontology_enrichment_disease=DOID:0050687!1.03e-10!143;DOID:162!5.01e-10!235;DOID:14566!1.82e-09!239;DOID:5093!8.58e-08!4;DOID:1612!8.58e-08!4;DOID:169!3.52e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.23e-17;4!DOID:1612;1.23e-17;4!DOID:299;1.30e-11;25!DOID:169;2.02e-11;6!DOID:4929;5.47e-09;2!DOID:3095;1.84e-08;22!DOID:2994;1.84e-08;22!DOID:171;7.44e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.31e-17,4;DOID:1612,1.31e-17,4;DOID:0050687,6.98e-13,143;DOID:299,1.18e-11,25;DOID:169,2.47e-11,6;DOID:162,3.71e-09,235;DOID:4929,5.93e-09,2;DOID:14566,8.02e-09,239;DOID:3095,2.00e-08,22;DOID:2994,2.00e-08,22;DOID:305,4.70e-08,106;DOID:171,8.36e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001008!3.00e-11!45;UBERON:0006554!2.14e-10!44;UBERON:0005631!6.57e-09!14;UBERON:0000158!6.57e-09!14;UBERON:0000365!5.89e-08!5;UBERON:0003124!1.54e-07!7;UBERON:0003064!4.14e-07!37;UBERON:0000058!5.54e-07!26;UBERON:0001987!7.59e-07!4;UBERON:0004340!7.59e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.07e-13;5!UBERON:0002410;1.07e-13;5!UBERON:0006947;4.40e-13;3!UBERON:0004054;4.40e-13;3!UBERON:0000310;1.83e-10;10!UBERON:0000058;5.04e-10;10!UBERON:0005904;6.38e-10;4!UBERON:0001987;1.09e-09;4!UBERON:0001443;1.76e-09;11!UBERON:0002294;2.76e-09;7!UBERON:0001173;2.76e-09;7!UBERON:0000010;1.28e-07;8!UBERON:0000365;2.72e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.37e-13,5;UBERON:0002410,1.37e-13,5;UBERON:0006947,4.69e-13,3;UBERON:0004054,4.69e-13,3;UBERON:0001008,8.06e-11,48;UBERON:0000310,2.00e-10,10;UBERON:0005904,6.68e-10,4;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4;UBERON:0001443,1.91e-09,11;UBERON:0006554,2.08e-09,47;UBERON:0000010,1.46e-07,8;UBERON:0002294,2.70e-07,9;UBERON:0001173,2.70e-07,9;UBERON:0004912,2.70e-07,9;UBERON:0000365,3.08e-07,5;UBERON:0004175,5.96e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.40285509343189,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,0,4.74632829784064,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,6.3216351836742,12.8772924314231,0,0,0,0,0,0,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,3.32870879020994,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.200506470303285,0.644566922551274,0,0,0,1.35359883872224,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0,0.509752546090077,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0.86101074534246,1.68471475667626,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0.635020748171649,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,7.66065526394986,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,2.69605053441981,0.537063524026827,0,0.591860433821602,0,0,0,0,0,6.2502662660456,16.0926399993,2.17499872630438,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,12.9115786457314,0.987334088507493,2.39024218228418,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,1.69623685720729,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0.782658475728359,0,4.3404284313433,0,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0,2.27144668714639,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0,1.36885967914362,4.24841747333129,0,0,0.144090417154106,0.114536596165916,0,0,0.621262677827163,0.471388069233591,0,0,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,2.16540459332447,0,0,0,0,0,0,0,0.77380195455795,0,0,1.97014268247995,5.5601863423098,0,0,1.91915197319445,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0.387848869084652,0.13223260174269,0,9.86741031243341,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0,0.18628920882415,0,1.37478448758317,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0.694567422971502,0,0,0.308801447160972,0.438568099157414,0.706756583783524,0,0,0,0,0.303859956177382,0,0,0,0,0,1.72041036127604,3.59230609709666,0,0.106691729694141,0,2.83757976783418,0,0,0,13.1731202442761,11.7529044422383,0,9.82886743728125,0.169732529954025,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0.381382095467167,4.8325194824207,0,0,0.60511520611056,0,0,0.655087670040387,2.66140955190681,0,0,0,0,0,0,0.496211178389294,0,1.27762427639595,0,0,0,0.91064876540519,0.443511850813194,0,0,0.0679697329768317,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35080575286394,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.237840181555137,0,0,0,0,0,0,0.245148321753905,0.942706188406504,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5173240401025,0,0,0,0,0,0,0,0,39.149836812534,0.101988829741982,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0.89543595472072,0,0,2.0659796484515,2.34640942403454,0,0,1.33151354837103,0,0 | |||
|short_description=p@chr10:8087281..8087303,+ | |||
}} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:8087281..8087303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087281..8087303, + |
Coexpression cluster: | C3050_teratocarcinoma_breast_seminal_neuroblastoma_MCF7_kidney_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.05e-12 | 3 |
transitional epithelial cell | 6.17e-09 | 4 |
urothelial cell | 6.17e-09 | 4 |
epithelial cell of gall bladder | 6.69e-09 | 2 |
epithelial cell | 8.88e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.37e-13 | 5 |
autonomic nervous system | 1.37e-13 | 5 |
male genital duct | 4.69e-13 | 3 |
internal male genitalia | 4.69e-13 | 3 |
renal system | 8.06e-11 | 48 |
breast | 2.00e-10 | 10 |
duct of male reproductive system | 6.68e-10 | 4 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
chest | 1.91e-09 | 11 |
urinary system structure | 2.08e-09 | 47 |
peripheral nervous system | 1.46e-07 | 8 |
biliary system | 2.70e-07 | 9 |
biliary tree | 2.70e-07 | 9 |
biliary bud | 2.70e-07 | 9 |
urothelium | 3.08e-07 | 5 |
internal genitalia | 5.96e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.31e-17 | 4 |
breast cancer | 1.31e-17 | 4 |
cell type cancer | 6.98e-13 | 143 |
adenocarcinoma | 1.18e-11 | 25 |
neuroendocrine tumor | 2.47e-11 | 6 |
cancer | 3.71e-09 | 235 |
tubular adenocarcinoma | 5.93e-09 | 2 |
disease of cellular proliferation | 8.02e-09 | 239 |
germ cell and embryonal cancer | 2.00e-08 | 22 |
germ cell cancer | 2.00e-08 | 22 |
carcinoma | 4.70e-08 | 106 |
neuroectodermal tumor | 8.36e-07 | 10 |