FFCP PHASE1:Hg19::chr10:90974711..90974729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90974711..90974729,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr10:90974711..90974729,- | |description=CAGE_peak_at_chr10:90974711..90974729,- | ||
|id=chr10:90974711..90974729,- | |id=chr10:90974711..90974729,- | ||
|ontology_enrichment_celltype=CL:0002194!2.41e-09!63;CL:0000576!2.41e-09!63;CL:0000040!2.41e-09!63;CL:0000559!2.41e-09!63;CL:0000839!4.70e-09!70;CL:0002009!8.17e-09!65;CL:0000557!4.99e-08!71;CL:0000766!9.65e-08!76 | |ontology_enrichment_celltype=CL:0002194!2.41e-09!63;CL:0000576!2.41e-09!63;CL:0000040!2.41e-09!63;CL:0000559!2.41e-09!63;CL:0000839!4.70e-09!70;CL:0002009!8.17e-09!65;CL:0000557!4.99e-08!71;CL:0000766!9.65e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.96e-24;6!CL:0000840;6.96e-24;5!CL:0000990;3.70e-16;8!CL:0000451;2.44e-13;10!CL:0000123;6.93e-09;2!CL:0002262;6.93e-09;2!CL:1000398;6.93e-09;2!CL:0002363;6.93e-09;2!CL:0000242;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.70e-24,5;CL:0001029,6.70e-24,5;CL:0000235,7.24e-24,6;CL:0000990,3.61e-16,8;CL:0000451,2.39e-13,10;CL:0002194,4.38e-09,59;CL:0000576,4.38e-09,59;CL:0000040,4.38e-09,59;CL:0000559,4.38e-09,59;CL:0000242,5.49e-09,2;CL:0002262,6.42e-09,2;CL:1000398,6.42e-09,2;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2;CL:0002009,8.79e-09,61;CL:0000839,4.18e-08,66;CL:0000557,5.56e-08,67;CL:0000766,2.06e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000008;6.93e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!5.17e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;6.93e-09;2!UBERON:0003497;6.93e-09;2!UBERON:0003909;6.93e-09;2!UBERON:0003566;6.93e-09;2!UBERON:0003835;6.93e-09;2!UBERON:0001777;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-09,76;UBERON:0001281,6.42e-09,2;UBERON:0003497,6.42e-09,2;UBERON:0003909,6.42e-09,2;UBERON:0003835,6.42e-09,2;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2;UBERON:0001474,1.10e-08,82;UBERON:0004765,7.09e-08,90;UBERON:0002405,1.32e-07,93;UBERON:0002390,3.39e-07,98;UBERON:0003061,3.39e-07,98;UBERON:0001434,4.83e-07,100 | |||
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| ||
|short_description=p@chr10:90974711..90974729,- | |short_description=p@chr10:90974711..90974729,- | ||
}} | }} |
Latest revision as of 16:34, 23 July 2015
Short description: | p@chr10:90974711..90974729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90974711..90974729, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.70e-24 | 5 |
common dendritic progenitor | 6.70e-24 | 5 |
macrophage | 7.24e-24 | 6 |
conventional dendritic cell | 3.61e-16 | 8 |
dendritic cell | 2.39e-13 | 10 |
monopoietic cell | 4.38e-09 | 59 |
monocyte | 4.38e-09 | 59 |
monoblast | 4.38e-09 | 59 |
promonocyte | 4.38e-09 | 59 |
Merkel cell | 5.49e-09 | 2 |
endothelial cell of sinusoid | 6.42e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.42e-09 | 2 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
macrophage dendritic cell progenitor | 8.79e-09 | 61 |
myeloid lineage restricted progenitor cell | 4.18e-08 | 66 |
granulocyte monocyte progenitor cell | 5.56e-08 | 67 |
myeloid leukocyte | 2.06e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.11e-09 | 76 |
hepatic sinusoid | 6.42e-09 | 2 |
abdomen blood vessel | 6.42e-09 | 2 |
sinusoid | 6.42e-09 | 2 |
abdominal segment blood vessel | 6.42e-09 | 2 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
bone element | 1.10e-08 | 82 |
skeletal element | 7.09e-08 | 90 |
immune system | 1.32e-07 | 93 |
hematopoietic system | 3.39e-07 | 98 |
blood island | 3.39e-07 | 98 |
skeletal system | 4.83e-07 | 100 |