FFCP PHASE1:Hg19::chr10:90986757..90986768,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90986757..90986768,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr10:90986757..90986768,- | |description=CAGE_peak_at_chr10:90986757..90986768,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000840!6.65e-08!5;CL:0001029!6.65e-08!5;CL:0000235!5.23e-07!10;CL:0002194!6.16e-07!63;CL:0000576!6.16e-07!63;CL:0000040!6.16e-07!63;CL:0000559!6.16e-07!63;CL:0000839!9.68e-07!70 | |ontology_enrichment_celltype=CL:0000840!6.65e-08!5;CL:0001029!6.65e-08!5;CL:0000235!5.23e-07!10;CL:0002194!6.16e-07!63;CL:0000576!6.16e-07!63;CL:0000040!6.16e-07!63;CL:0000559!6.16e-07!63;CL:0000839!9.68e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.87e-50;6!CL:0000511;5.97e-34;1!CL:0002625;5.97e-34;1!CL:0000216;5.97e-34;1!CL:0000840;5.13e-23;5!CL:0000990;1.01e-15;8!CL:0000451;4.66e-13;10!CL:0000154;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0000235;8.87e-50;6!CL:0000511;5.97e-34;1!CL:0002625;5.97e-34;1!CL:0000216;5.97e-34;1!CL:0000840;5.13e-23;5!CL:0000990;1.01e-15;8!CL:0000451;4.66e-13;10!CL:0000154;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.24e-49,6;CL:0000511,3.61e-34,1;CL:0002625,3.61e-34,1;CL:0000216,3.61e-34,1;CL:0000840,4.86e-23,5;CL:0001029,4.86e-23,5;CL:0000990,9.73e-16,8;CL:0002194,3.31e-14,59;CL:0000576,3.31e-14,59;CL:0000040,3.31e-14,59;CL:0000559,3.31e-14,59;CL:0002009,9.17e-14,61;CL:0000451,4.52e-13,10;CL:0000839,8.97e-13,66;CL:0000557,1.36e-12,67;CL:0000766,9.21e-12,72;CL:0000763,5.19e-08,108;CL:0000049,5.19e-08,108;CL:0002087,1.50e-07,115;CL:0002031,2.99e-07,120;CL:0000473,6.65e-07,48;CL:0000234,6.65e-07,48;CL:0000154,8.02e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.97e-34;1!UBERON:0001343;5.97e-34;1!UBERON:0004910;5.97e-34;1!UBERON:0004813;5.97e-34;1!UBERON:0004909;9.86e-18;2!UBERON:0005904;1.50e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0001136;5.97e-34;1!UBERON:0001343;5.97e-34;1!UBERON:0004910;5.97e-34;1!UBERON:0004813;5.97e-34;1!UBERON:0004909;9.86e-18;2!UBERON:0005904;1.50e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.61e-34,1;UBERON:0001343,3.61e-34,1;UBERON:0004910,3.61e-34,1;UBERON:0005154,3.61e-34,1;UBERON:0005295,3.61e-34,1;UBERON:0004813,3.61e-34,1;UBERON:0005297,3.61e-34,1;UBERON:0005294,3.61e-34,1;UBERON:0010141,3.61e-34,1;UBERON:0005891,3.61e-34,1;UBERON:0004909,7.67e-18,2;UBERON:0002371,3.56e-11,76;UBERON:0001474,2.13e-10,82;UBERON:0005904,1.32e-09,4;UBERON:0004765,1.61e-09,90;UBERON:0002405,3.14e-09,93;UBERON:0002390,8.77e-09,98;UBERON:0003061,8.77e-09,98;UBERON:0001434,1.29e-08,100;UBERON:0002193,5.19e-08,108 | |||
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| ||
|short_description=p@chr10:90986757..90986768,- | |short_description=p@chr10:90986757..90986768,- | ||
}} | }} |
Latest revision as of 16:34, 23 July 2015
Short description: | p@chr10:90986757..90986768, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90986757..90986768, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.24e-49 | 6 |
androgen binding protein secreting cell | 3.61e-34 | 1 |
seminiferous tubule epithelial cell | 3.61e-34 | 1 |
Sertoli cell | 3.61e-34 | 1 |
immature conventional dendritic cell | 4.86e-23 | 5 |
common dendritic progenitor | 4.86e-23 | 5 |
conventional dendritic cell | 9.73e-16 | 8 |
monopoietic cell | 3.31e-14 | 59 |
monocyte | 3.31e-14 | 59 |
monoblast | 3.31e-14 | 59 |
promonocyte | 3.31e-14 | 59 |
macrophage dendritic cell progenitor | 9.17e-14 | 61 |
dendritic cell | 4.52e-13 | 10 |
myeloid lineage restricted progenitor cell | 8.97e-13 | 66 |
granulocyte monocyte progenitor cell | 1.36e-12 | 67 |
myeloid leukocyte | 9.21e-12 | 72 |
myeloid cell | 5.19e-08 | 108 |
common myeloid progenitor | 5.19e-08 | 108 |
nongranular leukocyte | 1.50e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.99e-07 | 120 |
defensive cell | 6.65e-07 | 48 |
phagocyte | 6.65e-07 | 48 |
protein secreting cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.61e-34 | 1 |
seminiferous tubule of testis | 3.61e-34 | 1 |
epithelium of male gonad | 3.61e-34 | 1 |
epithelial cord | 3.61e-34 | 1 |
sex cord | 3.61e-34 | 1 |
seminiferous tubule epithelium | 3.61e-34 | 1 |
testis sex cord | 3.61e-34 | 1 |
genital ridge | 3.61e-34 | 1 |
primitive sex cord of indifferent gonad | 3.61e-34 | 1 |
coelomic epithelium | 3.61e-34 | 1 |
epithelium of gonad | 7.67e-18 | 2 |
bone marrow | 3.56e-11 | 76 |
bone element | 2.13e-10 | 82 |
duct of male reproductive system | 1.32e-09 | 4 |
skeletal element | 1.61e-09 | 90 |
immune system | 3.14e-09 | 93 |
hematopoietic system | 8.77e-09 | 98 |
blood island | 8.77e-09 | 98 |
skeletal system | 1.29e-08 | 100 |
hemolymphoid system | 5.19e-08 | 108 |