FFCP PHASE1:Hg19::chr11:116707032..116707042,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116707032..116707042,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr11:116707032..116707042,- | |description=CAGE_peak_at_chr11:116707032..116707042,- | ||
|id=chr11:116707032..116707042,- | |id=chr11:116707032..116707042,- | ||
|ontology_enrichment_celltype=CL:0000181!7.45e-26!12;CL:0000417!7.45e-26!12;CL:0000668!7.45e-26!12;CL:0000414!7.45e-26!12;CL:0000412!7.45e-26!12;CL:0000182!7.45e-26!12;CL:0000223!1.24e-10!59;CL:0002563!1.97e-09!4 | |ontology_enrichment_celltype=CL:0000181!7.45e-26!12;CL:0000417!7.45e-26!12;CL:0000668!7.45e-26!12;CL:0000414!7.45e-26!12;CL:0000412!7.45e-26!12;CL:0000182!7.45e-26!12;CL:0000223!1.24e-10!59;CL:0002563!1.97e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.35e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.42e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0004161;2.92e-08;11!UBERON:0003056;7.26e-08;3!UBERON:0009497;4.00e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.04e-28!19;UBERON:0006925!1.04e-28!19;UBERON:0008836!1.04e-28!19;UBERON:0008835!1.15e-24!22;UBERON:0003894!1.15e-24!22;UBERON:0009854!1.50e-23!23;UBERON:0007499!1.37e-21!25;UBERON:0009497!1.37e-21!25;UBERON:0000015!1.37e-21!25;UBERON:0002423!1.37e-21!25;UBERON:0006235!1.37e-21!25;UBERON:0004161!1.37e-21!25;UBERON:0005057!1.01e-20!26;UBERON:0009856!1.01e-20!26;UBERON:0003929!8.35e-18!54;UBERON:0002365!3.20e-17!31;UBERON:0002330!3.20e-17!31;UBERON:0002368!3.88e-15!35;UBERON:0004921!1.46e-12!129;UBERON:0004185!1.46e-12!129;UBERON:0000949!1.52e-11!45;UBERON:0005911!4.02e-11!82;UBERON:0002530!8.34e-11!59;UBERON:0000160!9.95e-11!27;UBERON:0000941!2.84e-10!1;UBERON:0004904!2.84e-10!1;UBERON:0002464!2.84e-10!1;UBERON:0001021!2.84e-10!1;UBERON:0001785!2.84e-10!1;UBERON:0001007!4.91e-10!155;UBERON:0001555!4.91e-10!155;UBERON:0007026!4.91e-10!155;UBERON:0001242!1.97e-09!4;UBERON:0001262!1.97e-09!4;UBERON:0004786!1.97e-09!4;UBERON:0004808!1.97e-09!4;UBERON:0001277!1.97e-09!4;UBERON:0005172!2.94e-09!55;UBERON:0005173!2.94e-09!55;UBERON:0004119!5.41e-09!169;UBERON:0000925!5.41e-09!169;UBERON:0006595!5.41e-09!169;UBERON:0002417!3.04e-08!61;UBERON:0000916!3.04e-08!61;UBERON:0005409!3.06e-08!35;UBERON:0003350!1.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0002107;3.39e-17;19!UBERON:0006925;3.39e-17;19!UBERON:0002108;8.47e-17;4!UBERON:0002423;3.60e-13;25!UBERON:0003714;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0002365;1.35e-10;31!UBERON:0002330;1.35e-10;31!UBERON:0000160;1.59e-10;17!UBERON:0002368;5.92e-09;33!UBERON:0005409;2.28e-08;22!UBERON:0001007;8.27e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.16e-21,1;UBERON:0001785,5.16e-21,1;UBERON:0002464,5.16e-21,1;UBERON:0004904,5.16e-21,1;UBERON:0001021,5.16e-21,1;UBERON:0003902,5.16e-21,1;UBERON:0005425,5.16e-21,1;UBERON:0002107,3.46e-17,19;UBERON:0006925,3.46e-17,19;UBERON:0008836,3.46e-17,19;UBERON:0002108,1.03e-16,4;UBERON:0008835,6.67e-15,22;UBERON:0003894,6.67e-15,22;UBERON:0009854,2.84e-14,23;UBERON:0007499,3.66e-13,25;UBERON:0009497,3.66e-13,25;UBERON:0000015,3.66e-13,25;UBERON:0002423,3.66e-13,25;UBERON:0006235,3.66e-13,25;UBERON:0004161,3.66e-13,25;UBERON:0009856,1.13e-12,26;UBERON:0003714,3.35e-11,2;UBERON:0005162,3.35e-11,2;UBERON:0000122,3.35e-11,2;UBERON:0002365,1.09e-10,31;UBERON:0002330,1.09e-10,31;UBERON:0000160,1.72e-10,17;UBERON:0002368,1.67e-09,35;UBERON:0004921,6.37e-08,118;UBERON:0000949,1.85e-07,45;UBERON:0005409,1.91e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,1.18157981336281,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.709476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.23840590304675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.709048640765013,0.824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46957305945423,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,1.18157981336281,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.709476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.23840590304675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.709048640765013,0.824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46957305945423,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:116707032..116707042,- | |short_description=p@chr11:116707032..116707042,- | ||
}} | }} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116707032..116707042, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116707032..116707042, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.16e-21 | 1 |
cranial nerve | 5.16e-21 | 1 |
nerve trunk | 5.16e-21 | 1 |
nerve connecting eye with brain | 5.16e-21 | 1 |
nerve | 5.16e-21 | 1 |
retinal neural layer | 5.16e-21 | 1 |
presumptive neural retina | 5.16e-21 | 1 |
liver | 3.46e-17 | 19 |
digestive gland | 3.46e-17 | 19 |
liver bud | 3.46e-17 | 19 |
small intestine | 1.03e-16 | 4 |
hepatic diverticulum | 6.67e-15 | 22 |
liver primordium | 6.67e-15 | 22 |
digestive tract diverticulum | 2.84e-14 | 23 |
epithelial sac | 3.66e-13 | 25 |
epithelium of foregut-midgut junction | 3.66e-13 | 25 |
anatomical boundary | 3.66e-13 | 25 |
hepatobiliary system | 3.66e-13 | 25 |
foregut-midgut junction | 3.66e-13 | 25 |
septum transversum | 3.66e-13 | 25 |
sac | 1.13e-12 | 26 |
neural tissue | 3.35e-11 | 2 |
multi cell component structure | 3.35e-11 | 2 |
neuron projection bundle | 3.35e-11 | 2 |
exocrine gland | 1.09e-10 | 31 |
exocrine system | 1.09e-10 | 31 |
intestine | 1.72e-10 | 17 |
endocrine gland | 1.67e-09 | 35 |
subdivision of digestive tract | 6.37e-08 | 118 |
endocrine system | 1.85e-07 | 45 |
gastrointestinal system | 1.91e-07 | 25 |