FFCP PHASE1:Hg19::chr11:126669581..126669589,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:126669581..126669589,- to FFCP PHASE1:Hg19::chr11:126669581..126669589,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:126669581..126669589,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr11:126669581..126669589,- | |||
|id=chr11:126669581..126669589,- | |||
|ontology_enrichment_celltype=CL:0002620!3.52e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000216;2.37e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.37e-29,1;CL:0002625,2.37e-29,1;CL:0000216,2.37e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.37e-29;1!DOID:3350;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.20e-29,1;DOID:3350,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.11e-38!57;UBERON:0005068!6.11e-38!57;UBERON:0006241!6.11e-38!57;UBERON:0007135!6.11e-38!57;UBERON:0002616!1.55e-33!59;UBERON:0002780!8.29e-30!41;UBERON:0001890!8.29e-30!41;UBERON:0006240!8.29e-30!41;UBERON:0003080!5.50e-29!42;UBERON:0000955!3.07e-27!69;UBERON:0006238!3.07e-27!69;UBERON:0002020!1.79e-26!34;UBERON:0003528!1.79e-26!34;UBERON:0001893!2.37e-26!34;UBERON:0002346!2.52e-25!90;UBERON:0003075!1.11e-24!86;UBERON:0007284!1.11e-24!86;UBERON:0005743!2.58e-24!86;UBERON:0002791!2.64e-24!33;UBERON:0001017!6.36e-24!82;UBERON:0000073!2.88e-23!94;UBERON:0001016!2.88e-23!94;UBERON:0002308!1.19e-22!9;UBERON:0000125!1.19e-22!9;UBERON:0001869!5.38e-22!32;UBERON:0003056!2.37e-20!61;UBERON:0002420!2.01e-17!9;UBERON:0007245!2.01e-17!9;UBERON:0010009!2.01e-17!9;UBERON:0010011!2.01e-17!9;UBERON:0000454!2.01e-17!9;UBERON:0009663!9.79e-17!7;UBERON:0007023!9.88e-17!115;UBERON:0000033!6.19e-15!123;UBERON:0002298!3.50e-14!8;UBERON:0000153!6.35e-14!129;UBERON:0007811!6.35e-14!129;UBERON:0002619!1.25e-12!22;UBERON:0004732!9.72e-12!13;UBERON:0000924!1.95e-11!173;UBERON:0006601!1.95e-11!173;UBERON:0001950!2.59e-11!20;UBERON:0000956!6.13e-11!25;UBERON:0000203!6.13e-11!25;UBERON:0004121!7.70e-11!169;UBERON:0000988!1.32e-10!3;UBERON:0001872!1.33e-10!5;UBERON:0006331!1.77e-10!3;UBERON:0003076!6.17e-10!15;UBERON:0003057!6.17e-10!15;UBERON:0004733!2.51e-09!12;UBERON:0002028!2.51e-09!12;UBERON:0007277!2.51e-09!12;UBERON:0000025!1.09e-08!194;UBERON:0001905!2.02e-08!2;UBERON:0002757!2.02e-08!2;UBERON:0010134!2.02e-08!2;UBERON:0002784!2.02e-08!2;UBERON:0005408!2.02e-08!2;UBERON:0001899!2.02e-08!2;UBERON:0005162!2.88e-08!2;UBERON:0000122!2.88e-08!2;UBERON:0001875!4.70e-08!2;UBERON:0006514!4.70e-08!2;UBERON:0000369!5.01e-08!4;UBERON:0002435!5.01e-08!4;UBERON:0000204!5.01e-08!4;UBERON:0010082!5.01e-08!4;UBERON:0002148!9.99e-08!2;UBERON:0009662!9.99e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.37e-29;1!UBERON:0000941;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0001905;1.15e-15;2!UBERON:0002757;1.15e-15;2!UBERON:0010134;1.15e-15;2!UBERON:0005408;1.15e-15;2!UBERON:0001899;1.15e-15;2!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0004909;2.05e-15;2!UBERON:0003296;1.70e-08;4!UBERON:0010133;1.70e-08;4!UBERON:0002784;1.70e-08;4!UBERON:0002346;2.26e-08;4!UBERON:0000923;2.26e-08;4!UBERON:0010316;2.26e-08;4!UBERON:0005904;2.26e-08;4!UBERON:0005291;2.26e-08;4!UBERON:0001872;5.08e-07;5!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.37e-29,1;UBERON:0001343,2.37e-29,1;UBERON:0004910,2.37e-29,1;UBERON:0005154,2.37e-29,1;UBERON:0005295,2.37e-29,1;UBERON:0004813,2.37e-29,1;UBERON:0005297,2.37e-29,1;UBERON:0005294,2.37e-29,1;UBERON:0010141,2.37e-29,1;UBERON:0005891,2.37e-29,1;UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0001905,1.15e-15,2;UBERON:0002757,1.15e-15,2;UBERON:0010134,1.15e-15,2;UBERON:0005408,1.15e-15,2;UBERON:0001899,1.15e-15,2;UBERON:0004909,2.05e-15,2;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0003296,1.70e-08,4;UBERON:0010133,1.70e-08,4;UBERON:0002784,1.70e-08,4;UBERON:0005904,2.26e-08,4;UBERON:0001781,2.43e-08,4;UBERON:0001872,5.08e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0.213557388818567,0,0,0,0.257640540045629,0,0.675105328965065,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,1.68900326502395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70059936081346,0,0,0,0,0,0,0.3062454773532,0.256916900385838,0,0,0,0.504143392443436,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.655087670040387,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,4.37579847214576,0,0,0,0,0.535701835878287,9.07966049990825,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0.213557388818567,0,0,0,0.257640540045629,0,0.675105328965065,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,1.68900326502395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70059936081346,0,0,0,0,0,0,0.3062454773532,0.256916900385838,0,0,0,0.504143392443436,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.655087670040387,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,4.37579847214576,0,0,0,0,0.535701835878287,9.07966049990825,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:126669581..126669589,- | |||
}} | }} |
Latest revision as of 19:46, 23 July 2015
Short description: | p@chr11:126669581..126669589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:126669581..126669589, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.37e-29 | 1 |
seminiferous tubule epithelial cell | 2.37e-29 | 1 |
Sertoli cell | 2.37e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.37e-29 | 1 |
seminiferous tubule of testis | 2.37e-29 | 1 |
epithelium of male gonad | 2.37e-29 | 1 |
epithelial cord | 2.37e-29 | 1 |
sex cord | 2.37e-29 | 1 |
seminiferous tubule epithelium | 2.37e-29 | 1 |
testis sex cord | 2.37e-29 | 1 |
genital ridge | 2.37e-29 | 1 |
primitive sex cord of indifferent gonad | 2.37e-29 | 1 |
coelomic epithelium | 2.37e-29 | 1 |
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
pineal body | 1.15e-15 | 2 |
regional part of epithalamus | 1.15e-15 | 2 |
secretory circumventricular organ | 1.15e-15 | 2 |
circumventricular organ | 1.15e-15 | 2 |
epithalamus | 1.15e-15 | 2 |
epithelium of gonad | 2.05e-15 | 2 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
gland of diencephalon | 1.70e-08 | 4 |
neuroendocrine gland | 1.70e-08 | 4 |
regional part of diencephalon | 1.70e-08 | 4 |
duct of male reproductive system | 2.26e-08 | 4 |
layer of retina | 2.43e-08 | 4 |
parietal lobe | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.20e-29 | 1 |
mesenchymal cell neoplasm | 2.74e-15 | 2 |