FFCP PHASE1:Hg19::chr11:129731805..129731821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:129731805..129731821,- | |||
|description=CAGE_peak_at_chr11:129731805..129731821,- | |description=CAGE_peak_at_chr11:129731805..129731821,- | ||
|id=chr11:129731805..129731821,- | |id=chr11:129731805..129731821,- | ||
|ontology_enrichment_celltype=CL:0000066!1.13e-11!254;CL:0002150!8.04e-07!3;CL:0000861!8.04e-07!3;CL:0000223!9.19e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.13e-11!254;CL:0002150!8.04e-07!3;CL:0000861!8.04e-07!3;CL:0000223!9.19e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002144;9.45e-18;3!CL:0000312;3.26e-11;5!CL:0000240;1.44e-09;6!CL:0000311;1.44e-09;6!CL:0000079;1.44e-09;6!CL:0000237;1.44e-09;6!CL:0000039;2.18e-08;7!CL:0000586;2.18e-08;7!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,9.46e-18,3;CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0000039,2.03e-08,7;CL:0000586,2.03e-08,7;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.44e-09;6!CL:0000114;1.44e-09;6 | |||
|ontology_enrichment_disease=DOID:305!5.10e-17!106;DOID:0050687!5.20e-14!143;DOID:162!3.18e-09!235;DOID:14566!8.44e-09!239 | |ontology_enrichment_disease=DOID:305!5.10e-17!106;DOID:0050687!5.20e-14!143;DOID:162!3.18e-09!235;DOID:14566!8.44e-09!239 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.81e-14;4!DOID:1612;8.81e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.82e-14,4;DOID:1612,8.82e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.04e-16!9;UBERON:0008947!1.81e-10!38;UBERON:0003258!1.81e-10!38;UBERON:0000065!1.05e-09!53;UBERON:0004119!8.14e-08!169;UBERON:0000925!8.14e-08!169;UBERON:0006595!8.14e-08!169;UBERON:0005153!2.10e-07!37;UBERON:0004921!3.82e-07!129;UBERON:0004185!3.82e-07!129;UBERON:0000077!4.48e-07!130;UBERON:0001557!4.63e-07!19;UBERON:0001004!7.02e-07!72;UBERON:0000072!7.12e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!1.04e-16!9;UBERON:0008947!1.81e-10!38;UBERON:0003258!1.81e-10!38;UBERON:0000065!1.05e-09!53;UBERON:0004119!8.14e-08!169;UBERON:0000925!8.14e-08!169;UBERON:0006595!8.14e-08!169;UBERON:0005153!2.10e-07!37;UBERON:0004921!3.82e-07!129;UBERON:0004185!3.82e-07!129;UBERON:0000077!4.48e-07!130;UBERON:0001557!4.63e-07!19;UBERON:0001004!7.02e-07!72;UBERON:0000072!7.12e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;9.45e-18;3!UBERON:0001915;9.45e-18;3!UBERON:0001982;9.45e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,9.46e-18,3;UBERON:0001915,9.46e-18,3;UBERON:0001982,9.46e-18,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0.241011029883482,0.441175890929576,0.435758888184812,0.71181185733329,0.674156540800822,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,2.08342208868187,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0.46112780877612,0,1.84700532267414,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0.335434687599266,0,0.157363764404994,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0.118193840883968,0.556157009460346,0,0.157115589916002,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.381882949668989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:129731805..129731821,- | |short_description=p@chr11:129731805..129731821,- | ||
}} | }} |
Latest revision as of 19:57, 23 July 2015
Short description: | p@chr11:129731805..129731821, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129731805..129731821, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 9.46e-18 | 3 |
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
germ line cell | 2.03e-08 | 7 |
germ cell | 2.03e-08 | 7 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 9.46e-18 | 3 |
endothelium of capillary | 9.46e-18 | 3 |
capillary | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.82e-14 | 4 |
breast cancer | 8.82e-14 | 4 |