FFCP PHASE1:Hg19::chr11:132814188..132814199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:132814188..132814199,- | |||
|coexpression_cluster_id=C586 | |coexpression_cluster_id=C586 | ||
|description=CAGE_peak_at_chr11:132814188..132814199,- | |description=CAGE_peak_at_chr11:132814188..132814199,- | ||
|id=chr11:132814188..132814199,- | |id=chr11:132814188..132814199,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.33e-85;3!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;1.54e-29;1!DOID:3451;1.66e-15;2!DOID:4159;1.66e-15;2!DOID:0060122;1.66e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.33e-29,1;DOID:3451,1.54e-15,2;DOID:4159,1.54e-15,2;DOID:0060122,1.54e-15,2 | |||
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| ||
|short_description=p@chr11:132814188..132814199,- | |short_description=p@chr11:132814188..132814199,- | ||
}} | }} |
Latest revision as of 20:06, 23 July 2015
Short description: | p@chr11:132814188..132814199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:132814188..132814199, - |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.48e-43 | 6 |
rhombic lip | 7.48e-43 | 6 |
regional part of metencephalon | 6.82e-29 | 9 |
metencephalon | 6.82e-29 | 9 |
future metencephalon | 6.82e-29 | 9 |
segmental subdivision of hindbrain | 6.79e-22 | 12 |
hindbrain | 6.79e-22 | 12 |
presumptive hindbrain | 6.79e-22 | 12 |
segmental subdivision of nervous system | 2.82e-20 | 13 |
posterior neural tube | 1.10e-17 | 15 |
chordal neural plate | 1.10e-17 | 15 |
dorsal plus ventral thalamus | 2.37e-15 | 2 |
thalamic complex | 2.37e-15 | 2 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
regional part of nervous system | 7.27e-09 | 53 |
regional part of brain | 7.27e-09 | 53 |
central nervous system | 7.39e-09 | 81 |
neural plate | 7.78e-09 | 82 |
presumptive neural plate | 7.78e-09 | 82 |
neurectoderm | 1.93e-08 | 86 |
zone of skin | 1.96e-08 | 4 |
neural tube | 2.02e-08 | 56 |
neural rod | 2.02e-08 | 56 |
future spinal cord | 2.02e-08 | 56 |
neural keel | 2.02e-08 | 56 |
regional part of diencephalon | 2.43e-08 | 4 |
nervous system | 5.13e-08 | 89 |
ecto-epithelium | 4.92e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.33e-29 | 1 |
skin carcinoma | 1.54e-15 | 2 |
skin cancer | 1.54e-15 | 2 |
integumentary system cancer | 1.54e-15 | 2 |