FFCP PHASE1:Hg19::chr11:2152575..2152590,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2152575..2152590,+ to FFCP PHASE1:Hg19::chr11:2152575..2152590,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:2152575..2152590,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_at_chr11:2152575..2152590,+ | |||
|id=chr11:2152575..2152590,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.52e-20;19!CL:0002541;2.28e-09;3!CL:0002564;1.53e-08;3!CL:0002575;2.52e-07;2!CL:0002536;2.96e-07;2!CL:0000669;3.48e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.68e-20,19;CL:0002541,2.87e-09,3;CL:0002564,1.10e-08,3;CL:0002575,2.52e-07,2;CL:0002536,3.02e-07,2;CL:0000669,3.05e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.71e-14!14;UBERON:0000158!1.71e-14!14;UBERON:0000478!2.39e-12!24;UBERON:0003124!2.84e-09!7;UBERON:0004119!1.12e-07!169;UBERON:0000925!1.12e-07!169;UBERON:0006595!1.12e-07!169;UBERON:0005256!2.97e-07!143;UBERON:0000481!4.66e-07!347;UBERON:0000305!6.10e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.60e-21;24!UBERON:0005631;5.30e-18;10!UBERON:0000158;5.30e-18;10!UBERON:0000305;9.18e-11;7!UBERON:0003124;2.28e-09;3!UBERON:0000920;2.28e-09;3!UBERON:0011135;9.04e-09;5!UBERON:0002216;9.04e-09;5!UBERON:0011134;9.04e-09;5!UBERON:0002209;9.04e-09;5!UBERON:0002213;9.04e-09;5!UBERON:0007844;9.04e-09;5!UBERON:0011138;9.04e-09;5!UBERON:0001130;9.04e-09;5!UBERON:0001066;9.04e-09;5!UBERON:0001468;9.04e-09;5!UBERON:0002242;1.53e-08;3!UBERON:0001987;2.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.45e-23,14;UBERON:0000158,1.45e-23,14;UBERON:0000478,9.91e-21,24;UBERON:0003124,1.17e-14,7;UBERON:0000305,9.88e-11,7;UBERON:0004871,2.49e-09,8;UBERON:0000920,2.87e-09,3;UBERON:0011135,7.11e-09,5;UBERON:0002216,7.11e-09,5;UBERON:0011134,7.11e-09,5;UBERON:0002209,7.11e-09,5;UBERON:0002213,7.11e-09,5;UBERON:0005856,7.11e-09,5;UBERON:0005866,7.11e-09,5;UBERON:0005863,7.11e-09,5;UBERON:0007844,7.11e-09,5;UBERON:0011138,7.11e-09,5;UBERON:0001130,7.11e-09,5;UBERON:0001066,7.11e-09,5;UBERON:0001468,7.11e-09,5;UBERON:0002242,1.10e-08,3;UBERON:0003068,1.10e-08,3;UBERON:0002328,1.10e-08,3;UBERON:0004880,1.10e-08,3;UBERON:0001987,2.47e-07,4;UBERON:0004340,2.47e-07,4 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0,0,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,23.8101095621888,16.3535526501641,0.495065411840187,2.31978163009541,0,0,0,0,0.246242116153576,1.02000345622126,1.56727360739044,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.44846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0.605429710579726,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,1.74290914304278,0.621966330092223,0.504641701751257,0,0,0,0,5.57241513638375,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,8.85516757510418,0.171567810298526,0,0,0,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.797814349754612,0,0.257207374262142,2.83698264046557,0.266422179016099,2.28764789853036,18.4491345833091,1.64648067356154,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,4.50153468953709,1.62759014219841,1.87173775377726,1.07057393278297,0.630809660135739,0.937131319941706,0,0,1.03473071292505,0,0,0,17.4263030141839,39.4614937382484,0,0,0,0.909382714338778,16.6435439510497,15.119514666484,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,14.6239934005863,0.40101294060657,0.0920809889358963,0.803701137152247,0.364182336013434,1.04899531967539,0,0.385076685522074,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,1.50506932156456,0,0,0,0.219259876645935,0,0,0,0,0.618246069886334,0,0,0,0,0,0.773365746336976,0,0,0.964856007391714,0,0.290033387828457,0.0852266274161009,6.76643470915204,0.661139661443912,0,0,0,0,0,0,0,0,0,0,0,0,1.58189712359363,1.14378116354295,0.255897791311334,0,0,0,1.2591072030832,0.54907405947211,0.471249609382746,0,0,0,0,0,0,1.22849920267187,0.282810863907425,0,0,0,0,0,0,0,0,0,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0,0,0.470719003883896,1.29151611801369,1.68471475667626,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,9.31103490476991,4.15750553165694,19.6582849343509,0.994147647766298,0,0,0,1.05562704063997,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0.69169171316418,0,0,9.8890359516895,1.09917112082235,99.1444683394661,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,11.236087062183,0,0,0,0,0,9.67925728389311,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,2.48578814858586,0,0,0,0,0,0.426905989478705,15.9847687665704,0,0,31.2302896108776,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.604651252380536,0,0,2.9937609276745,2.47247575143499,2.29172049104229,6.98835118754716,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,6.62534444561107,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0.398095888698616,4.80033317595784,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.764467467344097,0,0,0,0,0,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,2.58591088751157,0.676892955143315,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0,3.01588058552972,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.714765441766563,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.487671699929078,1.29485767437579,0.205325613712494,28.995360783455,0.971421986118279,0,12.9318003854889,0,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0,0,2.113278637917,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0.946629373159108,0,0,2.1161073620616,0,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.426467963801962,6.18967521805725,0,0.124149428591716,0,0,3.43599221228973,0.217716747896961,30.8009970976753,0,0,9.9798106963804,0.488419611665847,0,0,2.96423166951737,2.34640942403454,0.488965776731466,4.88275413978886,0,0,0 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|phase1_expression=0.363356758541113,1.2846031433459,0,0,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,23.8101095621888,16.3535526501641,0.495065411840187,2.31978163009541,0,0,0,0,0.246242116153576,1.02000345622126,1.56727360739044,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.44846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0.605429710579726,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,1.74290914304278,0.621966330092223,0.504641701751257,0,0,0,0,5.57241513638375,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,8.85516757510418,0.171567810298526,0,0,0,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.797814349754612,0,0.257207374262142,2.83698264046557,0.266422179016099,2.28764789853036,18.4491345833091,1.64648067356154,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,4.50153468953709,1.62759014219841,1.87173775377726,1.07057393278297,0.630809660135739,0.937131319941706,0,0,1.03473071292505,0,0,0,17.4263030141839,39.4614937382484,0,0,0,0.909382714338778,16.6435439510497,15.119514666484,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,14.6239934005863,0.40101294060657,0.0920809889358963,0.803701137152247,0.364182336013434,1.04899531967539,0,0.385076685522074,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,1.50506932156456,0,0,0,0.219259876645935,0,0,0,0,0.618246069886334,0,0,0,0,0,0.773365746336976,0,0,0.964856007391714,0,0.290033387828457,0.0852266274161009,6.76643470915204,0.661139661443912,0,0,0,0,0,0,0,0,0,0,0,0,1.58189712359363,1.14378116354295,0.255897791311334,0,0,0,1.2591072030832,0.54907405947211,0.471249609382746,0,0,0,0,0,0,1.22849920267187,0.282810863907425,0,0,0,0,0,0,0,0,0,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0,0,0.470719003883896,1.29151611801369,1.68471475667626,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,9.31103490476991,4.15750553165694,19.6582849343509,0.994147647766298,0,0,0,1.05562704063997,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0.69169171316418,0,0,9.8890359516895,1.09917112082235,99.1444683394661,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,11.236087062183,0,0,0,0,0,9.67925728389311,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,2.48578814858586,0,0,0,0,0,0.426905989478705,15.9847687665704,0,0,31.2302896108776,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.604651252380536,0,0,2.9937609276745,2.47247575143499,2.29172049104229,6.98835118754716,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,6.62534444561107,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0.398095888698616,4.80033317595784,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.764467467344097,0,0,0,0,0,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,2.58591088751157,0.676892955143315,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0,3.01588058552972,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.714765441766563,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.487671699929078,1.29485767437579,0.205325613712494,28.995360783455,0.971421986118279,0,12.9318003854889,0,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0,0,2.113278637917,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0.946629373159108,0,0,2.1161073620616,0,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.426467963801962,6.18967521805725,0,0.124149428591716,0,0,3.43599221228973,0.217716747896961,30.8009970976753,0,0,9.9798106963804,0.488419611665847,0,0,2.96423166951737,2.34640942403454,0.488965776731466,4.88275413978886,0,0,0 | ||
|short_description=p@chr11:2152575..2152590,+ | |||
}} | }} |
Latest revision as of 20:59, 23 July 2015
Short description: | p@chr11:2152575..2152590, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2152575..2152590, + |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.68e-20 | 19 |
chorionic membrane mesenchymal stem cell | 2.87e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 1.10e-08 | 3 |
central nervous system pericyte | 2.52e-07 | 2 |
amniotic epithelial cell | 3.02e-07 | 2 |
pericyte cell | 3.05e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.45e-23 | 14 |
membranous layer | 1.45e-23 | 14 |
extraembryonic structure | 9.91e-21 | 24 |
chorion | 1.17e-14 | 7 |
amnion | 9.88e-11 | 7 |
somatic layer of lateral plate mesoderm | 2.49e-09 | 8 |
egg chorion | 2.87e-09 | 3 |
intervertebral cartilage | 7.11e-09 | 5 |
symphysis | 7.11e-09 | 5 |
nonsynovial joint | 7.11e-09 | 5 |
fibrous joint | 7.11e-09 | 5 |
cartilaginous joint | 7.11e-09 | 5 |
developing mesenchymal condensation | 7.11e-09 | 5 |
pre-cartilage condensation | 7.11e-09 | 5 |
cartilaginous condensation | 7.11e-09 | 5 |
cartilage element | 7.11e-09 | 5 |
post-cranial axial skeletal system | 7.11e-09 | 5 |
vertebral column | 7.11e-09 | 5 |
intervertebral disk | 7.11e-09 | 5 |
intervertebral joint | 7.11e-09 | 5 |
nucleus pulposus | 1.10e-08 | 3 |
axial mesoderm | 1.10e-08 | 3 |
notochord | 1.10e-08 | 3 |
chordamesoderm | 1.10e-08 | 3 |
placenta | 2.47e-07 | 4 |
allantois | 2.47e-07 | 4 |