FFCP PHASE1:Hg19::chr11:27379089..27379098,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:27379089..27379098,- to FFCP PHASE1:Hg19::chr11:27379089..27379098,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:27379089..27379098,- | |||
|description=CAGE_peak_at_chr11:27379089..27379098,- | |||
|id=chr11:27379089..27379098,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;9.86e-18;2!CL:0002178;1.85e-12;3!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0000306;1.50e-09;4!CL:0002222;1.50e-09;4!CL:0002224;1.50e-09;4!CL:0002559;6.78e-08;5!CL:0000235;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.27e-17,2;CL:0002178,1.85e-12,3;CL:0000346,2.89e-12,3;CL:1000428,2.89e-12,3;CL:0000306,1.44e-09,4;CL:0002222,1.44e-09,4;CL:0002224,1.44e-09,4;CL:0002559,7.01e-08,5;CL:0000235,7.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.23e-17!239;DOID:162!7.37e-16!235;DOID:0050687!8.40e-11!143;DOID:305!6.63e-08!106;DOID:0050686!1.81e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:12603;5.97e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.61e-34,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.74e-12;3!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0010077;1.50e-09;4!UBERON:0005389;1.50e-09;4!UBERON:0000484;1.50e-09;4!UBERON:0000965;1.50e-09;4!UBERON:0001803;1.50e-09;4!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5!UBERON:0002073;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.89e-12,3;UBERON:0001992,2.89e-12,3;UBERON:0002110,3.24e-12,3;UBERON:0006242,3.24e-12,3;UBERON:0010077,1.44e-09,4;UBERON:0005389,1.44e-09,4;UBERON:0000484,1.44e-09,4;UBERON:0002546,1.44e-09,4;UBERON:0000965,1.44e-09,4;UBERON:0001803,1.44e-09,4;UBERON:0003073,1.44e-09,4;UBERON:0005426,1.44e-09,4;UBERON:0002073,7.01e-08,5;UBERON:0005086,7.01e-08,5 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.305653622991805,0,0.236132343941038,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.747243402759005,0,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0.265059536642971,0.580969714347592,0.310983165046111,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,1.44331342025273,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0,0.0821271560138091,0,0,0.362578348774867,0,0.276242966807689,0,0.546273504020151,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,1.85803175125719,0.144269212976445,0.284567373393656,0.637705090915289,0,0,0,0,0,0,0,0,0.338583555603207,0.481764225311099,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0.520874984799877,0.885741385813839,0.361789315876224,0,0,0,0,0,0.557694977114413,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0.75901493089674,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0.313265848516366,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0,0.687944129886466,0.483781656445426,0.65780385377567,0.328461828212837,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,1.36885967914362,0,0,0.39961921916426,5.76361668616424,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.472699093843342,0.329663433524666,0.471824806979294,0.0984274815147488,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0,0,0.332787154610557,0,0.553394539744923,0.249960815924213,0,0.570930667089935,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.680117776536817,0,0.489473409012935,0,0,0.219284049578707,0.530067437837643,0.38582807654183,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0.327628914576042,0.169732529954025,0.637724760305049,0.247871528518004,0,0,0.394308725006267,0,0,0,0,0,0,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0.345701962667338,0,0.135939465953663,0,0.236387681767936,0.444925607568277,0,0.157115589916002,0,0,0,0,0,0.632054446930906,0.23248285073625,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.354996002191696,0.0852134047591577,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0.356760272332706,0,0.439762066981716,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.2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| ||
|short_description=p@chr11:27379089..27379098,- | |||
}} | }} |
Latest revision as of 21:17, 23 July 2015
Short description: | p@chr11:27379089..27379098, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:27379089..27379098, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.27e-17 | 2 |
epithelial cell of stomach | 1.85e-12 | 3 |
hair follicle dermal papilla cell | 2.89e-12 | 3 |
stem cell of epidermis | 2.89e-12 | 3 |
crystallin accumulating cell | 1.44e-09 | 4 |
vertebrate lens cell | 1.44e-09 | 4 |
lens epithelial cell | 1.44e-09 | 4 |
hair follicle cell | 7.01e-08 | 5 |
macrophage | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.89e-12 | 3 |
papillary layer of dermis | 2.89e-12 | 3 |
gallbladder | 3.24e-12 | 3 |
gall bladder primordium | 3.24e-12 | 3 |
cuboidal epithelium | 1.44e-09 | 4 |
transparent eye structure | 1.44e-09 | 4 |
simple cuboidal epithelium | 1.44e-09 | 4 |
cranial placode | 1.44e-09 | 4 |
lens of camera-type eye | 1.44e-09 | 4 |
epithelium of lens | 1.44e-09 | 4 |
lens placode | 1.44e-09 | 4 |
lens vesicle | 1.44e-09 | 4 |
hair follicle | 7.01e-08 | 5 |
hair follicle placode | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.61e-34 | 1 |