FFCP PHASE1:Hg19::chr11:639444..639447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:639444..639447,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_at_chr11:639444..639447,+ | |description=CAGE_peak_at_chr11:639444..639447,+ | ||
Latest revision as of 00:04, 24 July 2015
| Short description: | p@chr11:639444..639447, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr11:639444..639447, + |
| Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr11:639444..639447+ |
|---|
0.0
0.5
1.0
1.5
2.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| retinal pigment epithelial cell | 5.96e-34 | 3 |
| visual pigment cell | 7.14e-26 | 4 |
| pigment cell | 2.00e-08 | 14 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| retina | 2.83e-66 | 6 |
| photoreceptor array | 2.83e-66 | 6 |
| posterior segment of eyeball | 2.83e-66 | 6 |
| pigmented layer of retina | 5.96e-34 | 3 |
| presumptive retinal pigmented epithelium | 5.96e-34 | 3 |
| layer of retina | 7.14e-26 | 4 |
| camera-type eye | 5.71e-21 | 20 |
| simple eye | 5.71e-21 | 20 |
| immature eye | 5.71e-21 | 20 |
| ocular region | 5.71e-21 | 20 |
Showing 1 to 10 of 27 entries
