FFCP PHASE1:Hg19::chr11:76480816..76480852,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:76480816..76480852,-
|short_description=p@chr11:76480816..76480852,-
|description=CAGE_peak_at_chr11:76480816..76480852,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:76480816..76480852,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr11:76480816..76480852,- | |||
|id=chr11:76480816..76480852,- | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-20!254;CL:0000082!1.89e-07!19;CL:0000077!3.77e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.19e-13;2!CL:0000082;1.35e-11;19!CL:0000319;4.27e-08;1!CL:0002553;1.04e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.07e-14,253;CL:1000415,6.28e-14,2;CL:0000082,1.80e-11,19;CL:0000319,4.28e-08,1;CL:0002553,1.01e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;7.89e-16;30!UBERON:0008947;7.02e-10;29 | |||
|ontology_enrichment_disease=DOID:305!1.37e-35!106;DOID:0050687!1.12e-26!143;DOID:162!8.08e-19!235;DOID:14566!5.24e-18!239;DOID:0050615!1.88e-11!16;DOID:1324!4.37e-10!15;DOID:299!1.84e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.34e-18;16!DOID:1324;7.83e-15;15!DOID:305;1.80e-09;106!DOID:3030;4.27e-08;1!DOID:0050619;1.91e-07;1!DOID:1357;1.91e-07;1!DOID:5662;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.65e-29,106;DOID:0050687,9.84e-23,143;DOID:0050615,2.07e-18,16;DOID:162,2.53e-17,235;DOID:14566,7.48e-17,239;DOID:1324,1.13e-14,15;DOID:3030,4.28e-08,1;DOID:5662,1.30e-07,1;DOID:0050619,2.04e-07,1;DOID:1357,2.04e-07,1;DOID:7,3.36e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.09e-15!9;UBERON:0001007!1.18e-14!155;UBERON:0001555!1.18e-14!155;UBERON:0007026!1.18e-14!155;UBERON:0008947!1.55e-14!38;UBERON:0003258!1.55e-14!38;UBERON:0000077!6.70e-14!130;UBERON:0004119!5.93e-13!169;UBERON:0000925!5.93e-13!169;UBERON:0006595!5.93e-13!169;UBERON:0004921!7.08e-13!129;UBERON:0004185!7.08e-13!129;UBERON:0001041!7.94e-13!98;UBERON:0000072!6.65e-11!46;UBERON:0005177!7.85e-11!107;UBERON:0005911!1.16e-10!82;UBERON:0000065!1.30e-10!53;UBERON:0001004!1.42e-09!72;UBERON:0000466!9.75e-08!126;UBERON:0004802!1.89e-07!19;UBERON:0000115!1.89e-07!19;UBERON:0002048!2.78e-07!22;UBERON:0000117!2.78e-07!22;UBERON:0000171!2.78e-07!22;UBERON:0000170!2.78e-07!22;UBERON:0005597!2.78e-07!22;UBERON:0000118!2.78e-07!22;UBERON:0001557!4.23e-07!19;UBERON:0003104!4.39e-07!238;UBERON:0009142!4.39e-07!238;UBERON:0009569!4.58e-07!113;UBERON:0001048!5.60e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.35e-11;19!UBERON:0000115;1.35e-11;19!UBERON:0002048;6.12e-10;22!UBERON:0004807;6.12e-10;22!UBERON:0000117;6.12e-10;22!UBERON:0000171;6.12e-10;22!UBERON:0000170;6.12e-10;22!UBERON:0002110;2.14e-09;3!UBERON:0002294;8.09e-09;7!UBERON:0001173;8.09e-09;7!UBERON:0001764;1.91e-07;1!UBERON:0001825;1.91e-07;1!UBERON:0000072;6.88e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.80e-11,19;UBERON:0000115,1.80e-11,19;UBERON:0002048,7.82e-10,22;UBERON:0000117,7.82e-10,22;UBERON:0000171,7.82e-10,22;UBERON:0000170,7.82e-10,22;UBERON:0005597,7.82e-10,22;UBERON:0000118,7.82e-10,22;UBERON:0002110,1.40e-09,3;UBERON:0006242,1.40e-09,3;UBERON:0005177,2.14e-09,101;UBERON:0005911,7.09e-09,82;UBERON:0004807,1.32e-07,28;UBERON:0005153,1.68e-07,37;UBERON:0001764,2.04e-07,1;UBERON:0001825,2.04e-07,1;UBERON:0008947,2.88e-07,38;UBERON:0003258,2.88e-07,38;UBERON:0002294,4.84e-07,9;UBERON:0001173,4.84e-07,9;UBERON:0004912,4.84e-07,9;UBERON:0009569,5.25e-07,112 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,0.842923450390509,0.482022059766964,0.882351781859152,0.435758888184812,0.71181185733329,0.808987848960987,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0.114814448164607,0,0,1.35359883872224,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0.769350375349168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,5.19161406559267,0,0.0986434056369336,0,0,0,0,0,2.08342208868187,0,0,0.1137934482855,0.762760950878299,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.871507708151921,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0.394584402849391,0,0,0,0,0,1.32930774541437,0,0.627865836814451,0,1.13843818411917,0,0.520679215005393,0,0.0870592065804026,0,0,1.74161396320353,1.5348756588099,1.39596276990456,0.0969890164884194,0,0,0,0,0,1.95551382734803,4.96984685559509,0.213452994739353,0.19980960958213,0.432271251462318,0,0,0,3.23056592470125,0.942776138467182,0,0.104602846312333,3.77393405254391,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.315132729228895,0.0824158583811665,0.26961417541674,10.3348855590486,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.367182116944987,0,1.25501137532991,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44825778499256,10.5722253347501,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,1.41348686625211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0.906823702049089,0,0.489473409012935,0,0.617602894321944,0.219284049578707,0,0.192914038270915,0.506827321959218,4.86858885317099,8.98118888501116,3.3424595179512,0,0,0,0,0.655219697692825,28.5096574154314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,4.24691004051865,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8863681038116,0,0,1.65471377237555,0,0,0,0,0,0.647782773655864,1.9110067515482,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.098150233615243,1.70685094975177,0,0,0,0,0,0,0,4.06605895340256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,1.04313776695919,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr11:76480816..76480852,- | |||
}} | }} |
Latest revision as of 02:40, 24 July 2015
Short description: | p@chr11:76480816..76480852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:76480816..76480852, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.07e-14 | 253 |
epithelial cell of gall bladder | 6.28e-14 | 2 |
epithelial cell of lung | 1.80e-11 | 19 |
mucus secreting cell | 4.28e-08 | 1 |
lung fibroblast | 1.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.80e-11 | 19 |
lung epithelium | 1.80e-11 | 19 |
lung | 7.82e-10 | 22 |
respiratory tube | 7.82e-10 | 22 |
respiration organ | 7.82e-10 | 22 |
pair of lungs | 7.82e-10 | 22 |
lung primordium | 7.82e-10 | 22 |
lung bud | 7.82e-10 | 22 |
gallbladder | 1.40e-09 | 3 |
gall bladder primordium | 1.40e-09 | 3 |
trunk region element | 2.14e-09 | 101 |
endo-epithelium | 7.09e-09 | 82 |
respiratory system epithelium | 1.32e-07 | 28 |
epithelial bud | 1.68e-07 | 37 |
maxillary sinus | 2.04e-07 | 1 |
paranasal sinus | 2.04e-07 | 1 |
respiratory primordium | 2.88e-07 | 38 |
endoderm of foregut | 2.88e-07 | 38 |
biliary system | 4.84e-07 | 9 |
biliary tree | 4.84e-07 | 9 |
biliary bud | 4.84e-07 | 9 |
subdivision of trunk | 5.25e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.65e-29 | 106 |
cell type cancer | 9.84e-23 | 143 |
respiratory system cancer | 2.07e-18 | 16 |
cancer | 2.53e-17 | 235 |
disease of cellular proliferation | 7.48e-17 | 239 |
lung cancer | 1.13e-14 | 15 |
mucinous adenocarcinoma | 4.28e-08 | 1 |
pleomorphic carcinoma | 1.30e-07 | 1 |
paranasal sinus cancer | 2.04e-07 | 1 |
maxillary sinus cancer | 2.04e-07 | 1 |
disease of anatomical entity | 3.36e-07 | 39 |