FFCP PHASE1:Hg19::chr11:824631..824643,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:824631..824643,+ | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_at_chr11:824631..824643,+ | |description=CAGE_peak_at_chr11:824631..824643,+ | ||
|id=chr11:824631..824643,+ | |id=chr11:824631..824643,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002521;2.04e-20;3!CL:0002188;2.99e-12;5!CL:0000136;1.09e-10;13!CL:0002569;2.29e-10;6!CL:1000746;5.15e-09;7!CL:1000612;5.15e-09;7!CL:0002617;1.44e-08;2!CL:0002600;2.23e-08;2!CL:0000062;2.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.05e-20,3;CL:0002188,2.25e-12,5;CL:0002569,2.90e-10,6;CL:0000136,2.49e-09,15;CL:1000746,4.21e-09,7;CL:1000612,4.21e-09,7;CL:0002617,1.50e-08,2;CL:0002600,2.31e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.92e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.04e-20;3!UBERON:0002084;1.92e-15;1!UBERON:0002082;1.92e-15;1!UBERON:0002072;1.19e-12;5!UBERON:0003422;2.29e-10;6!UBERON:0003104;5.15e-09;7!UBERON:0000074;5.15e-09;7!UBERON:0001229;5.15e-09;7!UBERON:0009142;5.15e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.05e-20,3;UBERON:0002084,1.78e-15,1;UBERON:0002082,1.78e-15,1;UBERON:0010226,1.78e-15,1;UBERON:0002072,1.19e-12,5;UBERON:0003422,2.90e-10,6;UBERON:0010532,4.21e-09,7;UBERON:0000074,4.21e-09,7;UBERON:0001229,4.21e-09,7;UBERON:0001230,4.21e-09,7;UBERON:0003220,4.21e-09,7;UBERON:0005749,4.21e-09,7;UBERON:0004199,4.21e-09,7;UBERON:0004209,4.21e-09,7;UBERON:0004198,4.21e-09,7;UBERON:0005103,4.50e-08,8;UBERON:0000083,4.50e-08,8;UBERON:0009201,4.50e-08,8;UBERON:0006553,4.50e-08,8;UBERON:0003074,4.50e-08,8;UBERON:0003060,4.50e-08,8;UBERON:0000080,2.86e-07,9;UBERON:0002120,2.86e-07,9;UBERON:0004875,2.86e-07,9;UBERON:0005721,2.86e-07,9;UBERON:0005754,2.86e-07,9;UBERON:0007297,2.86e-07,9 | |||
|phase1_expression=0,2.14100523890983,0.422863212287913,0,0.893922188854576,0,5.06599756336621,0,7.57438321779532,0,1.39560233594486,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.152826811495903,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,1.13362783106643,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0.414656231081544,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.876901770507525,0,1.31178950409327,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0.658589785919804,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.293104467356165,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0.157054096250234,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0.655219697692825,0,0,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0.435433495793923,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,2.14100523890983,0.422863212287913,0,0.893922188854576,0,5.06599756336621,0,7.57438321779532,0,1.39560233594486,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.152826811495903,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,1.13362783106643,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0.414656231081544,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.876901770507525,0,1.31178950409327,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0.658589785919804,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.293104467356165,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0.157054096250234,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0.655219697692825,0,0,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0.435433495793923,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr11:824631..824643,+ | |short_description=p@chr11:824631..824643,+ | ||
}} | }} |
Latest revision as of 02:59, 24 July 2015
Short description: | p@chr11:824631..824643, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:824631..824643, + |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.05e-20 | 3 |
glomerular endothelial cell | 2.25e-12 | 5 |
mesenchymal stem cell of umbilical cord | 2.90e-10 | 6 |
fat cell | 2.49e-09 | 15 |
glomerular cell | 4.21e-09 | 7 |
kidney corpuscule cell | 4.21e-09 | 7 |
adipocyte of breast | 1.50e-08 | 2 |
smooth muscle cell of trachea | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.05e-20 | 3 |
heart left ventricle | 1.78e-15 | 1 |
cardiac ventricle | 1.78e-15 | 1 |
future cardiac ventricle | 1.78e-15 | 1 |
hypodermis | 1.19e-12 | 5 |
mesenchyme of umbilical cord | 2.90e-10 | 6 |
primitive nephron | 4.21e-09 | 7 |
renal glomerulus | 4.21e-09 | 7 |
renal corpuscle | 4.21e-09 | 7 |
glomerular capsule | 4.21e-09 | 7 |
metanephric mesenchyme | 4.21e-09 | 7 |
glomerular tuft | 4.21e-09 | 7 |
S-shaped body | 4.21e-09 | 7 |
renal vesicle | 4.21e-09 | 7 |
comma-shaped body | 4.21e-09 | 7 |
mesonephric epithelium | 4.50e-08 | 8 |
mesonephric tubule | 4.50e-08 | 8 |
nephric duct | 4.50e-08 | 8 |
renal duct | 4.50e-08 | 8 |
mesonephric duct | 4.50e-08 | 8 |
pronephric duct | 4.50e-08 | 8 |
mesonephros | 2.86e-07 | 9 |
pronephros | 2.86e-07 | 9 |
nephrogenic cord | 2.86e-07 | 9 |
pronephric mesoderm | 2.86e-07 | 9 |
rostral part of nephrogenic cord | 2.86e-07 | 9 |
presumptive pronephric mesoderm | 2.86e-07 | 9 |