FFCP PHASE1:Hg19::chr12:109221132..109221142,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109221132..109221142,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr12:109221132..109221142,+ | |description=CAGE_peak_at_chr12:109221132..109221142,+ | ||
|id=chr12:109221132..109221142,+ | |id=chr12:109221132..109221142,+ | ||
|ontology_enrichment_celltype=CL:0000048!1.76e-07!430;CL:0000723!3.65e-07!436;CL:0000840!9.26e-07!5;CL:0001029!9.26e-07!5;CL:0000034!9.28e-07!444 | |ontology_enrichment_celltype=CL:0000048!1.76e-07!430;CL:0000723!3.65e-07!436;CL:0000840!9.26e-07!5;CL:0001029!9.26e-07!5;CL:0000034!9.28e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.56e-34;2!CL:0001016;1.56e-34;2!CL:0002591;9.48e-18;1!CL:0000453;1.84e-14;5!CL:0000097;2.49e-14;5!CL:0000840;3.25e-12;5!CL:0000990;1.90e-08;8!CL:0000163;2.25e-08;9!CL:0000451;4.57e-07;10!CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3!CL:0002580;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.56e-34,2;CL:0001016,1.56e-34,2;CL:0002591,1.03e-17,1;CL:0000453,1.84e-14,5;CL:0000097,2.41e-14,5;CL:0002028,2.41e-14,5;CL:0000840,3.26e-12,5;CL:0001029,3.26e-12,5;CL:0000990,1.90e-08,8;CL:0000163,2.20e-08,9;CL:0000451,4.57e-07,10;CL:0002580,7.28e-07,3;CL:0000346,7.70e-07,3;CL:1000428,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.74e-07!86;UBERON:0002204!2.78e-07!167;UBERON:0001896!7.93e-07!3;UBERON:0005290!7.93e-07!3;UBERON:0010096!7.93e-07!3 | |ontology_enrichment_uberon=UBERON:0001474!2.74e-07!86;UBERON:0002204!2.78e-07!167;UBERON:0001896!7.93e-07!3;UBERON:0005290!7.93e-07!3;UBERON:0010096!7.93e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.51e-09;2!UBERON:0002012;1.51e-09;2!UBERON:0008886;1.51e-09;2!UBERON:0000412;8.86e-07;3!UBERON:0001992;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.57e-09,2;UBERON:0007497,1.57e-09,2;UBERON:0003643,1.57e-09,2;UBERON:0003504,1.57e-09,2;UBERON:0003469,1.57e-09,2;UBERON:0003496,1.57e-09,2;UBERON:0002012,1.57e-09,2;UBERON:0008886,1.57e-09,2;UBERON:0007303,1.57e-09,2;UBERON:0002061,1.57e-09,2;UBERON:0005432,1.57e-09,2;UBERON:0004363,1.57e-09,2;UBERON:0000412,7.70e-07,3;UBERON:0001992,7.70e-07,3;UBERON:0004145,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,1.27867425159808,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,5.6206781832615,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84154367945675,0,0,0,0.482561763430822,0,0,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.522109747527277,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.10309883423452,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,3.0952078182318,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0.592834895693833,0,0,0,0.7520696820681,0,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0.568209015825267,0.50313580350515,0,0,0.302461847526478,0.466311601748341,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,1.27867425159808,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,5.6206781832615,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84154367945675,0,0,0,0.482561763430822,0,0,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.522109747527277,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.10309883423452,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,3.0952078182318,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0.592834895693833,0,0,0,0.7520696820681,0,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0.568209015825267,0.50313580350515,0,0,0.302461847526478,0.466311601748341,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:109221132..109221142,+ | |short_description=p@chr12:109221132..109221142,+ | ||
}} | }} |
Latest revision as of 04:40, 24 July 2015
Short description: | p@chr12:109221132..109221142, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109221132..109221142, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.56e-34 | 2 |
immature CD1a-positive Langerhans cell | 1.56e-34 | 2 |
smooth muscle cell of the pulmonary artery | 1.03e-17 | 1 |
Langerhans cell | 1.84e-14 | 5 |
mast cell | 2.41e-14 | 5 |
basophil mast progenitor cell | 2.41e-14 | 5 |
immature conventional dendritic cell | 3.26e-12 | 5 |
common dendritic progenitor | 3.26e-12 | 5 |
conventional dendritic cell | 1.90e-08 | 8 |
endocrine cell | 2.20e-08 | 9 |
dendritic cell | 4.57e-07 | 10 |
preadipocyte of the breast | 7.28e-07 | 3 |
hair follicle dermal papilla cell | 7.70e-07 | 3 |
stem cell of epidermis | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.57e-09 | 2 |
developing epithelial placode | 1.57e-09 | 2 |
respiratory system arterial blood vessel | 1.57e-09 | 2 |
respiratory system blood vessel | 1.57e-09 | 2 |
respiratory system artery | 1.57e-09 | 2 |
head blood vessel | 1.57e-09 | 2 |
pulmonary artery | 1.57e-09 | 2 |
pulmonary vascular system | 1.57e-09 | 2 |
pharyngeal vasculature | 1.57e-09 | 2 |
truncus arteriosus | 1.57e-09 | 2 |
aortic sac | 1.57e-09 | 2 |
pharyngeal arch artery | 1.57e-09 | 2 |
dermal papilla | 7.70e-07 | 3 |
papillary layer of dermis | 7.70e-07 | 3 |
outflow tract | 9.12e-07 | 3 |