FFCP PHASE1:Hg19::chr12:116933204..116933236,-: Difference between revisions
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|id=chr12:116933204..116933236,-
|short_description=p@chr12:116933204..116933236,-
|description=CAGE_peak_at_chr12:116933204..116933236,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:116933204..116933236,- | |||
|coexpression_cluster_id=C262 | |||
|description=CAGE_peak_at_chr12:116933204..116933236,- | |||
|id=chr12:116933204..116933236,- | |||
|ontology_enrichment_celltype=CL:1000415!3.23e-08!2;CL:0000066!1.23e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000322;4.93e-21;3!CL:0000082;4.63e-13;19!CL:0002253;4.18e-09;2!CL:0002202;1.20e-07;9!CL:0002632;1.20e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,4.02e-21,3;CL:0000082,4.35e-13,19;CL:0002253,4.02e-09,2;CL:0002202,1.13e-07,9;CL:0002632,1.13e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.18e-08;29!UBERON:0001041;2.24e-08;30 | |||
|ontology_enrichment_disease=DOID:305!8.88e-17!106;DOID:5093!1.41e-15!4;DOID:1612!1.41e-15!4;DOID:0050687!5.25e-13!143;DOID:299!9.20e-11!25;DOID:3910!7.92e-09!2;DOID:1749!1.44e-08!14;DOID:1324!2.41e-08!15;DOID:0050615!8.88e-08!16;DOID:7!1.39e-07!39;DOID:3908!3.33e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.48e-35;4!DOID:1612;1.48e-35;4!DOID:3910;5.50e-31;2!DOID:299;4.96e-22;25!DOID:1324;1.89e-16;15!DOID:178;2.08e-16;1!DOID:326;2.08e-16;1!DOID:3978;2.08e-16;1!DOID:3394;2.08e-16;1!DOID:5844;2.08e-16;1!DOID:0050615;1.91e-15;16!DOID:3908;4.96e-13;5!DOID:1325;1.41e-09;7!DOID:3904;1.41e-09;7!DOID:114;7.21e-09;2!DOID:7;3.72e-08;39!DOID:3905;1.20e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.48e-35,4;DOID:1612,1.48e-35,4;DOID:3910,4.04e-31,2;DOID:299,5.06e-22,25;DOID:178,1.41e-16,1;DOID:326,1.41e-16,1;DOID:3978,1.41e-16,1;DOID:3394,1.41e-16,1;DOID:5844,1.41e-16,1;DOID:1324,1.74e-16,15;DOID:0050615,1.77e-15,16;DOID:305,1.40e-13,106;DOID:3908,4.39e-13,5;DOID:7,6.21e-10,39;DOID:0050687,8.16e-10,143;DOID:1325,1.29e-09,7;DOID:3904,1.29e-09,7;DOID:114,5.94e-09,2;DOID:3905,1.13e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0004903!7.92e-09!2;UBERON:0002173!7.92e-09!2;UBERON:0002186!7.92e-09!2;UBERON:0005153!5.23e-08!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.50e-31;2!UBERON:0002173;5.50e-31;2!UBERON:0002186;5.50e-31;2!UBERON:0004821;4.93e-21;3!UBERON:0007499;4.93e-21;3!UBERON:0003215;4.93e-21;3!UBERON:0010368;4.93e-21;3!UBERON:0009911;4.93e-21;3!UBERON:0002299;4.93e-21;3!UBERON:0006524;4.93e-21;3!UBERON:0008874;4.93e-21;3!UBERON:0002169;4.93e-21;3!UBERON:0004894;4.93e-21;3!UBERON:0009856;4.87e-16;4!UBERON:0000310;1.17e-14;10!UBERON:0001443;2.20e-13;11!UBERON:0004802;4.63e-13;19!UBERON:0000115;4.63e-13;19!UBERON:0000915;5.14e-12;52!UBERON:0002048;2.53e-11;22!UBERON:0004807;2.53e-11;22!UBERON:0000117;2.53e-11;22!UBERON:0000171;2.53e-11;22!UBERON:0000170;2.53e-11;22!UBERON:0005911;6.00e-09;36!UBERON:0000058;5.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.04e-31,2;UBERON:0002173,4.04e-31,2;UBERON:0002186,4.04e-31,2;UBERON:0004821,4.02e-21,3;UBERON:0003215,4.02e-21,3;UBERON:0010368,4.02e-21,3;UBERON:0009911,4.02e-21,3;UBERON:0002299,4.02e-21,3;UBERON:0006524,4.02e-21,3;UBERON:0008874,4.02e-21,3;UBERON:0002169,4.02e-21,3;UBERON:0004894,4.02e-21,3;UBERON:0000310,1.17e-14,10;UBERON:0005153,1.64e-14,37;UBERON:0000915,5.17e-14,52;UBERON:0001443,2.20e-13,11;UBERON:0004802,4.35e-13,19;UBERON:0000115,4.35e-13,19;UBERON:0005157,2.22e-11,47;UBERON:0002048,2.40e-11,22;UBERON:0000117,2.40e-11,22;UBERON:0000171,2.40e-11,22;UBERON:0000170,2.40e-11,22;UBERON:0005597,2.40e-11,22;UBERON:0000118,2.40e-11,22;UBERON:0004807,5.65e-09,28;UBERON:0005911,1.24e-08,82;UBERON:0001046,7.81e-08,19;UBERON:0005178,1.97e-07,34;UBERON:0002224,1.97e-07,34;UBERON:0005181,3.16e-07,35 | |||
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| ||
|short_description=p@chr12:116933204..116933236,- | |||
}} | }} |
Latest revision as of 05:24, 24 July 2015
Short description: | p@chr12:116933204..116933236, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:116933204..116933236, - |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 4.02e-21 | 3 |
epithelial cell of lung | 4.35e-13 | 19 |
epithelial cell of large intestine | 4.02e-09 | 2 |
epithelial cell of tracheobronchial tree | 1.13e-07 | 9 |
epithelial cell of lower respiratory tract | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.04e-31 | 2 |
alveolar duct | 4.04e-31 | 2 |
bronchiole | 4.04e-31 | 2 |
pulmonary alveolus epithelium | 4.02e-21 | 3 |
alveolus | 4.02e-21 | 3 |
pulmonary lobule | 4.02e-21 | 3 |
lobule | 4.02e-21 | 3 |
alveolus of lung | 4.02e-21 | 3 |
alveolar system | 4.02e-21 | 3 |
pulmonary acinus | 4.02e-21 | 3 |
alveolar sac | 4.02e-21 | 3 |
alveolar wall | 4.02e-21 | 3 |
breast | 1.17e-14 | 10 |
epithelial bud | 1.64e-14 | 37 |
thoracic segment of trunk | 5.17e-14 | 52 |
chest | 2.20e-13 | 11 |
respiratory tract epithelium | 4.35e-13 | 19 |
lung epithelium | 4.35e-13 | 19 |
epithelial fold | 2.22e-11 | 47 |
lung | 2.40e-11 | 22 |
respiratory tube | 2.40e-11 | 22 |
respiration organ | 2.40e-11 | 22 |
pair of lungs | 2.40e-11 | 22 |
lung primordium | 2.40e-11 | 22 |
lung bud | 2.40e-11 | 22 |
respiratory system epithelium | 5.65e-09 | 28 |
endo-epithelium | 1.24e-08 | 82 |
hindgut | 7.81e-08 | 19 |
thoracic cavity element | 1.97e-07 | 34 |
thoracic cavity | 1.97e-07 | 34 |
thoracic segment organ | 3.16e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.48e-35 | 4 |
breast cancer | 1.48e-35 | 4 |
lung adenocarcinoma | 4.04e-31 | 2 |
adenocarcinoma | 5.06e-22 | 25 |
vascular disease | 1.41e-16 | 1 |
ischemia | 1.41e-16 | 1 |
extrinsic cardiomyopathy | 1.41e-16 | 1 |
myocardial ischemia | 1.41e-16 | 1 |
myocardial infarction | 1.41e-16 | 1 |
lung cancer | 1.74e-16 | 15 |
respiratory system cancer | 1.77e-15 | 16 |
carcinoma | 1.40e-13 | 106 |
non-small cell lung carcinoma | 4.39e-13 | 5 |
disease of anatomical entity | 6.21e-10 | 39 |
cell type cancer | 8.16e-10 | 143 |
bronchus cancer | 1.29e-09 | 7 |
bronchogenic carcinoma | 1.29e-09 | 7 |
heart disease | 5.94e-09 | 2 |
lung carcinoma | 1.13e-07 | 9 |