FFCP PHASE1:Hg19::chr12:122504252..122504255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122504252..122504255,+ | |||
|description=CAGE_peak_at_chr12:122504252..122504255,+ | |description=CAGE_peak_at_chr12:122504252..122504255,+ | ||
|id=chr12:122504252..122504255,+ | |id=chr12:122504252..122504255,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000632;1.48e-16;3!CL:0002581;4.76e-13;1!CL:0002591;4.76e-13;1 | |ontology_enrichment_celltype_v019=CL:0000632;1.48e-16;3!CL:0002581;4.76e-13;1!CL:0002591;4.76e-13;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.49e-16,3;CL:0002581,2.62e-13,1;CL:0002591,6.06e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.69e-07;2 | |ontology_enrichment_development_v019=UBERON:0007297;3.69e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;4.76e-13;1!DOID:3350;3.69e-07;2!DOID:3910;3.69e-07;2 | |ontology_enrichment_disease_v019=DOID:3571;4.76e-13;1!DOID:3350;3.69e-07;2!DOID:3910;3.69e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,7.68e-13,1;DOID:3910,3.70e-07,2;DOID:3350,4.69e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;4.76e-13;1!UBERON:0004903;3.69e-07;2!UBERON:0000078;3.69e-07;2!UBERON:0002012;3.69e-07;2!UBERON:0005406;3.69e-07;2!UBERON:0008886;3.69e-07;2!UBERON:0002173;3.69e-07;2!UBERON:0002186;3.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001301;4.76e-13;1!UBERON:0004903;3.69e-07;2!UBERON:0000078;3.69e-07;2!UBERON:0002012;3.69e-07;2!UBERON:0005406;3.69e-07;2!UBERON:0008886;3.69e-07;2!UBERON:0002173;3.69e-07;2!UBERON:0002186;3.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.73e-13,1;UBERON:0005406,2.74e-07,2;UBERON:0004903,3.70e-07,2;UBERON:0002173,3.70e-07,2;UBERON:0002186,3.70e-07,2;UBERON:0000078,4.17e-07,2;UBERON:0007497,4.17e-07,2;UBERON:0003643,4.17e-07,2;UBERON:0003504,4.17e-07,2;UBERON:0003469,4.17e-07,2;UBERON:0003496,4.17e-07,2;UBERON:0002012,4.17e-07,2;UBERON:0008886,4.17e-07,2;UBERON:0007303,4.17e-07,2;UBERON:0002061,4.17e-07,2;UBERON:0005432,4.17e-07,2;UBERON:0004363,4.17e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0.743155811443641,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.429680979473094,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.731140468893853,0,0,0.848432591722276,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0.0982490410131212,0.35667105148125,0.709522128141196,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0,1.82587743226554,0,0,0,0,0.403599414382095,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0,0,0,1.09886179476517,0.664846727600626,0,0,0.335643173951685,0,0.158936578980379,0,0,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0.450970258243478,0.414752765588989,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0.0967563312890851,0,0,0,0.0882561266915003,0,0.685209623233754,0.596143835108969,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0.621262677827163,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0.223171457441873,0,1.08089965062721,0,0.315132729228895,0.247247575143499,0.202210631562555,0,0.169346664131569,0,0.136203406111576,0.643012593860077,0.137539436597234,0,0,0,0,0,0.315222829196793,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.979762080328227,1.19730191562487,0.738832686744051,0.681552087141687,0,0,0,0,0,0,1.40963004463334,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0.463044948647668,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0.169732529954025,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0,0,0.588886311006154,0.235939446695481,0,0,0,0.690359926060101,0,0.0752103283492573,0.60511520611056,3.90757005616546,0,0,0.295712172434091,0,0,0,0.0634158101939068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| ||
|short_description=p@chr12:122504252..122504255,+ | |short_description=p@chr12:122504252..122504255,+ | ||
}} | }} |
Latest revision as of 06:04, 24 July 2015
Short description: | p@chr12:122504252..122504255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122504252..122504255, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.49e-16 | 3 |
perirenal preadipocyte | 2.62e-13 | 1 |
smooth muscle cell of the pulmonary artery | 6.06e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.73e-13 | 1 |
perirenal fat | 2.74e-07 | 2 |
bronchoalveolar duct junction | 3.70e-07 | 2 |
alveolar duct | 3.70e-07 | 2 |
bronchiole | 3.70e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.17e-07 | 2 |
developing epithelial placode | 4.17e-07 | 2 |
respiratory system arterial blood vessel | 4.17e-07 | 2 |
respiratory system blood vessel | 4.17e-07 | 2 |
respiratory system artery | 4.17e-07 | 2 |
head blood vessel | 4.17e-07 | 2 |
pulmonary artery | 4.17e-07 | 2 |
pulmonary vascular system | 4.17e-07 | 2 |
pharyngeal vasculature | 4.17e-07 | 2 |
truncus arteriosus | 4.17e-07 | 2 |
aortic sac | 4.17e-07 | 2 |
pharyngeal arch artery | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 7.68e-13 | 1 |
lung adenocarcinoma | 3.70e-07 | 2 |
mesenchymal cell neoplasm | 4.69e-07 | 2 |