FFCP PHASE1:Hg19::chr12:133298658..133298670,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:133298658..133298670,+ to FFCP PHASE1:Hg19::chr12:133298658..133298670,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:133298658..133298670,+ | |||
|description=CAGE_peak_at_chr12:133298658..133298670,+ | |||
|id=chr12:133298658..133298670,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000239;6.32e-07;3!CL:1000615;6.32e-07;3!CL:0002306;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.14e-07,3;CL:1000615,6.14e-07,3;CL:0002306,6.14e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.85e-29!235;DOID:14566!4.25e-28!239;DOID:0050686!3.35e-24!137;DOID:0050687!2.80e-18!143;DOID:305!8.19e-15!106;DOID:2531!4.65e-12!51;DOID:0060083!4.65e-12!51;DOID:0050615!1.09e-08!16;DOID:1324!8.91e-08!15 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.44e-18;1!DOID:0070004;3.44e-18;1!DOID:12603;3.44e-18;1!DOID:4468;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.66e-18,1;DOID:4960,3.75e-18,1;DOID:0070004,3.75e-18,1;DOID:4468,1.44e-09,2;DOID:2531,3.39e-08,51;DOID:0060083,3.39e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;6.32e-07;3!UBERON:0007685;6.32e-07;3!UBERON:0004134;6.32e-07;3!UBERON:0002113;8.17e-07;24!UBERON:0011143;8.17e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,6.14e-07,3;UBERON:0007685,6.14e-07,3;UBERON:0004134,6.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0.254876273045038,2.49322802678617,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,2.78704762688578,0,0.142283686696828,0.797131363644112,0.199579371432817,0,0.211673582723883,0.324621940274555,0.561594356226918,0.456469358066384,0.313359791546046,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.682760689712998,0.508507300585533,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,1.02193298195737,0.31396051279005,0.166211681900156,0,0.19606253431774,0,0.37950746544837,0,0.210998064528027,1.30586246527318,0.848118428603645,0,0,0.265372693510018,0,0.296521128680622,0.617819694732514,0.417687798021821,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,0.300646838828985,1.03688191397247,0,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0.261177619741208,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0.794858446811959,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.393709926058995,0.254019996197353,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,1.33971858218986,0.638341257770182,0.544017803369474,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0.192619830407303,0.428883182749851,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0.265729680626726,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0.746842107858986,2.41100971525142,0,0.184105950251841,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0.109209638192014,0.678930119816101,0,0.123935764259002,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0.41023272848151,0,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0.785201868921944,0.609589624911347,0,0.102662806856247,0,0.485710993059139,0.467878926924211,0,0.118920090777569,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0.352894871715692,2.32699963398588,0,0.458729283404541,0,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0.254876273045038,2.49322802678617,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,2.78704762688578,0,0.142283686696828,0.797131363644112,0.199579371432817,0,0.211673582723883,0.324621940274555,0.561594356226918,0.456469358066384,0.313359791546046,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.682760689712998,0.508507300585533,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,1.02193298195737,0.31396051279005,0.166211681900156,0,0.19606253431774,0,0.37950746544837,0,0.210998064528027,1.30586246527318,0.848118428603645,0,0,0.265372693510018,0,0.296521128680622,0.617819694732514,0.417687798021821,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,0.300646838828985,1.03688191397247,0,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0.261177619741208,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0.794858446811959,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.393709926058995,0.254019996197353,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,1.33971858218986,0.638341257770182,0.544017803369474,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0.192619830407303,0.428883182749851,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0.265729680626726,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0.746842107858986,2.41100971525142,0,0.184105950251841,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0.109209638192014,0.678930119816101,0,0.123935764259002,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0.41023272848151,0,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0.785201868921944,0.609589624911347,0,0.102662806856247,0,0.485710993059139,0.467878926924211,0,0.118920090777569,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0.352894871715692,2.32699963398588,0,0.458729283404541,0,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0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| ||
|short_description=p@chr12:133298658..133298670,+ | |||
}} | }} |
Latest revision as of 06:55, 24 July 2015
Short description: | p@chr12:133298658..133298670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:133298658..133298670, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.14e-07 | 3 |
kidney cortex tubule cell | 6.14e-07 | 3 |
epithelial cell of proximal tubule | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 6.14e-07 | 3 |
region of nephron tubule | 6.14e-07 | 3 |
proximal tubule | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.66e-18 | 1 |
bone marrow cancer | 3.75e-18 | 1 |
myeloma | 3.75e-18 | 1 |
clear cell adenocarcinoma | 1.44e-09 | 2 |
hematologic cancer | 3.39e-08 | 51 |
immune system cancer | 3.39e-08 | 51 |