FFCP PHASE1:Hg19::chr12:49050390..49050394,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:49050390..49050394,-
|short_description=p@chr12:49050390..49050394,-
|description=CAGE_peak_at_chr12:49050390..49050394,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:49050390..49050394,- | |||
|description=CAGE_peak_at_chr12:49050390..49050394,- | |||
|id=chr12:49050390..49050394,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.24e-11;25!CL:0000624;1.56e-09;6!CL:0000791;3.78e-08;18!CL:0000789;3.78e-08;18!CL:0002419;3.78e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.96e-11,25;CL:0000827,5.96e-11,25;CL:0000624,8.81e-10,6;CL:0000791,2.49e-08,18;CL:0000789,2.49e-08,18;CL:0002420,2.49e-08,18;CL:0002419,2.49e-08,18;CL:0000790,2.49e-08,18;CL:0000838,7.05e-08,52;CL:0000542,1.06e-07,53;CL:0000051,1.06e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.07e-09;3!CL:0000790;3.78e-08;18!UBERON:0005425;1.31e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.26e-19!235;DOID:14566!5.36e-19!239;DOID:0050687!3.32e-17!143;DOID:305!2.03e-13!106;DOID:0050686!6.21e-10!137;DOID:3095!2.72e-08!22;DOID:2994!2.72e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.61e-07;1!DOID:10165;3.61e-07;1!DOID:1798;3.61e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.50e-07,1;DOID:10165,5.50e-07,1;DOID:1798,5.50e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.25e-13;2!UBERON:0000941;1.31e-07;1!UBERON:0001785;1.31e-07;1!UBERON:0002464;1.31e-07;1!UBERON:0004904;1.31e-07;1!UBERON:0001021;1.31e-07;1!UBERON:0002134;3.61e-07;1!UBERON:0001389;3.61e-07;1!UBERON:0004913;3.61e-07;1!UBERON:0000026;3.61e-07;1!UBERON:0008784;3.61e-07;1!UBERON:0006058;3.61e-07;1!UBERON:0003703;3.61e-07;1!UBERON:0003663;3.61e-07;1!UBERON:0004256;3.61e-07;1!UBERON:0004708;3.61e-07;1!UBERON:0002101;3.61e-07;1!UBERON:0004709;3.61e-07;1!UBERON:0005208;3.61e-07;1!UBERON:0002529;3.61e-07;1!UBERON:0010538;3.61e-07;1!UBERON:0003661;3.61e-07;1!UBERON:0010890;3.61e-07;1!UBERON:0002471;3.61e-07;1!UBERON:0001383;3.61e-07;1!UBERON:0004145;3.61e-07;1!UBERON:0005946;3.61e-07;1!UBERON:0010758;3.61e-07;1!UBERON:0010707;3.61e-07;1!UBERON:0000978;3.61e-07;1!UBERON:0002103;3.61e-07;1!UBERON:0001665;3.61e-07;1!UBERON:0003823;3.61e-07;1!UBERON:0000154;3.61e-07;1!UBERON:0010709;3.61e-07;1!UBERON:0005965;3.61e-07;1!UBERON:0001174;3.61e-07;1!UBERON:0004914;3.61e-07;1!UBERON:0002078;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.26e-13,2;UBERON:0000941,1.27e-07,1;UBERON:0001785,1.27e-07,1;UBERON:0002464,1.27e-07,1;UBERON:0004904,1.27e-07,1;UBERON:0001021,1.27e-07,1;UBERON:0003902,1.27e-07,1;UBERON:0005425,1.27e-07,1;UBERON:0002134,2.67e-07,1;UBERON:0005208,2.67e-07,1;UBERON:0005946,2.67e-07,1;UBERON:0005965,2.67e-07,1;UBERON:0002078,2.67e-07,1;UBERON:0005418,3.02e-07,1;UBERON:0001389,3.02e-07,1;UBERON:0000026,3.02e-07,1;UBERON:0008784,3.02e-07,1;UBERON:0006058,3.02e-07,1;UBERON:0003663,3.02e-07,1;UBERON:0004256,3.02e-07,1;UBERON:0004708,3.02e-07,1;UBERON:0002101,3.02e-07,1;UBERON:0004709,3.02e-07,1;UBERON:0002529,3.02e-07,1;UBERON:0010538,3.02e-07,1;UBERON:0003661,3.02e-07,1;UBERON:0010890,3.02e-07,1;UBERON:0002471,3.02e-07,1;UBERON:0001383,3.02e-07,1;UBERON:0004357,3.02e-07,1;UBERON:0004347,3.02e-07,1;UBERON:0005420,3.02e-07,1;UBERON:0005732,3.02e-07,1;UBERON:0010758,3.02e-07,1;UBERON:0010707,3.02e-07,1;UBERON:0000978,3.02e-07,1;UBERON:0002103,3.02e-07,1;UBERON:0001665,3.02e-07,1;UBERON:0003823,3.02e-07,1;UBERON:0000154,3.02e-07,1;UBERON:0010709,3.02e-07,1;UBERON:0005733,3.02e-07,1;UBERON:0005730,3.02e-07,1;UBERON:0004913,6.20e-07,1;UBERON:0003703,6.20e-07,1;UBERON:0001174,6.20e-07,1;UBERON:0004914,6.20e-07,1 | |||
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| ||
|short_description=p@chr12:49050390..49050394,- | |||
}} | }} |
Latest revision as of 08:53, 24 July 2015
Short description: | p@chr12:49050390..49050394, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:49050390..49050394, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.96e-11 | 25 |
pro-T cell | 5.96e-11 | 25 |
CD4-positive, alpha-beta T cell | 8.81e-10 | 6 |
mature alpha-beta T cell | 2.49e-08 | 18 |
alpha-beta T cell | 2.49e-08 | 18 |
immature T cell | 2.49e-08 | 18 |
mature T cell | 2.49e-08 | 18 |
immature alpha-beta T cell | 2.49e-08 | 18 |
lymphoid lineage restricted progenitor cell | 7.05e-08 | 52 |
lymphocyte | 1.06e-07 | 53 |
common lymphoid progenitor | 1.06e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.50e-07 | 1 |
endocrine pancreas cancer | 5.50e-07 | 1 |
pancreatic endocrine carcinoma | 5.50e-07 | 1 |